KEGG   Zalophus californianus (California sea lion): 113936742
Entry
113936742         CDS       T07874                                 
Name
(RefSeq) high mobility group protein B1-like
  KO
K10802  high mobility group protein B1
Organism
zca  Zalophus californianus (California sea lion)
Pathway
zca03410  Base excision repair
zca04140  Autophagy - animal
zca04217  Necroptosis
zca04613  Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:zca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    113936742
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    113936742
  09143 Cell growth and death
   04217 Necroptosis
    113936742
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    113936742
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zca03036]
    113936742
   03400 DNA repair and recombination proteins [BR:zca03400]
    113936742
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zca04147]
    113936742
Chromosome and associated proteins [BR:zca03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    113936742
DNA repair and recombination proteins [BR:zca03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     113936742
   MMR (mismatch excision repair)
    Other MMR factors
     113936742
Exosome [BR:zca04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   113936742
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1
Other DBs
NCBI-GeneID: 113936742
NCBI-ProteinID: XP_035580864
UniProt: A0A6P9F4M1
LinkDB
Position
17:complement(59171439..59172333)
AA seq 203 aa
MGKGNPKKPKGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYKREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SMGDVAKKLGEMWSNTAADDKQPYGKKAAKLKEKYEKVIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEDEEEDDDDE
NT seq 612 nt   +upstreamnt  +downstreamnt
atgggcaaaggaaatcctaagaagccgaaaggcaaaatgtcatcatatgcattctttgtg
caaacttgccgagaggagcacaagaagaagcacccagatgcttcagtcaacttctcagag
ttttctaagaagtgctcagaaaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagacatggcaaaggcggacaaggcccgttataaaagagaaatgaaaacttatatcccc
cctaaaggggaaacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gcctttttcttgttttgttctgagtatcgccccaaaatcaaaggagaacatcccggccta
tccatgggtgatgttgcaaagaaactgggagagatgtggagtaacaccgctgcagatgac
aagcagccgtatggaaagaaggctgctaagctgaaggaaaaatatgaaaaggttattgct
gcgtaccgagctaaaggaaagcctgatgcggcaaaaaagggagttgtcaaggctgaaaag
agcaagaaaaagaaggaagaggaggaagatgaggaagatgaagatgaagaagaagatgat
gatgatgaataa

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