Zalophus californianus (California sea lion): 113937004
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Entry
113937004 CDS
T07874
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zca03041
]
113937004 (RBM39)
Spliceosome [BR:
zca03041
]
Common components
Common spliceosomal components
General mRNP proteins
113937004 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
POP1_C
IHO1
Motif
Other DBs
NCBI-GeneID:
113937004
NCBI-ProteinID:
XP_027476425
UniProt:
A0A6J2F4Y6
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All DBs
Position
8:complement(116797733..116827714)
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AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggctccttacaagaaggatgagaac
aagttgagcagtgctaacggccatgaagaacgtagcaaaaagaggaaaaaaagcaagagc
agaagtcgtagtcatgaacgaaaaagaagcaaaagtaaggaacggaaacgaagtagagat
agagaaaggaaaaagagcaaaagccgtgaaaggaagcgaagtaggagcaaagaaaggaga
cggagccgttcaagaagtcgagatcgcagattcagaggccgctacagaagtccttactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagacgacgctctcgaagcaaaagtccattcagaaaagacaagagccccgtgagggaa
cctattgataatctaactcctgaggaaagagatgcaaggacagttttctgcatgcagctg
gcagcaagaattcggccaagggatttggaagagtttttttctacagtaggaaaggttcga
gatgtgagaatgatttctgatagaaattcaagacgttccaaaggaattgcatatgtggaa
tttgttgatgttagctcagtgcctctagcaataggattaactggccaacgtgttttagga
gtgccaatcatagtacaagcttcacaggcagaaaaaaacagagctgcagcaatggcaaac
aatctacaaaagggaagtgctggaccgatgaggctttatgtgggctcattacactttaac
ataactgaagatatgcttcggggaatctttgagccttttggaaggattgaaagtatccaa
ctcatgatggatagtgaaacaggccgatctaagggatatggatttattacgttttctgac
tcagaatgtgccaagaaggctttggaacaacttaatggatttgagttagcaggaagacca
atgaaagttggtcatgttactgaacgtactgatgcttccagtgctagctcatttttggac
agtgatgaactggaaaggactggaattgacttgggaacaactggtcgtctccagttaatg
gcaagacttgcagaaggtacaggtttgcagattccaccagcagcacagcaggctctacaa
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acaagactttctcaacagactgaagcttcggctttagctgctgctgcctctgttcagcct
cttgcaacacagtgtttccaactttctaacatgtttaaccctcaaacagaagaagaagtt
ggatgggatacagagattaaggatgatgtgattgaagaatgtaataaacatggaggagtt
attcatatttatgttgacaaaaattcagctcagggcaatgtgtatgtgaagtgcccatca
attgctgcagccattgctgctgtcaatgcattgcatggcaggtggtttgctggtaaaatg
ataacagcagcatatgtacctcttccaacttaccacaacctcttccctgattctatgaca
gcaacacaactactggttccaagtagacgatga
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