Zalophus californianus (California sea lion): 113937157
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Entry
113937157 CDS
T07874
Symbol
CCDC88A
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
zca03037
]
113937157 (CCDC88A)
Cilium and associated proteins [BR:
zca03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
113937157 (CCDC88A)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HOOK_N
APG6_N
Motif
Other DBs
NCBI-GeneID:
113937157
NCBI-ProteinID:
XP_027476746
UniProt:
A0A6J2F862
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Position
8:65890079..66008487
Genome browser
AA seq
2030 aa
AA seq
DB search
MENEIFTPLLEQFMTSPLVTWVKTFGPLAAGNGTNLDEYVALVDGVFLNQVMLQINPKSE
SQRVNKKVNNDASLRIHNLSILVRQIKFYYQETLQQLIMMSLPNVLIIGKNPFSEQGTEE
VKKLLLLLLGCAVQCQKKEEFIERIQGLDFDTKAAVAAHIQEVTHNQENVFDLQWMEVTD
MSQEEIEPLLKNMALHLKRLIDERDEHSETIIELSEERDGLHFLPHASSSAQSPCGSPGM
KRTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQMEIELKRLQQENMNLLS
DARSARMYRDELDALREKAIRVDKLESEVSRYKERLHDIEFYKARVEELKEDNQVLLETK
TMLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQK
QSMDESLHLGWELEQISRTSELSEAPQKSLGHEVNELTSSRLLKLEMENQSLTKTVEELR
STMDSAEGNTSKILKIEKENQRLSKKVEILENEIIQEKQSLQNCQNLSKDLMKEKAQLEK
TIETLRENSERQIKILEQENEHLNQTVSSLRQRSQISAEARVKDIEKENKILHESIKETS
SKLSKIEFEKRQIRKELEHYKEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEA
LEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNVESLKCASMKM
AQLQLENKELESEKEQLKKGLELMKASFKKTERLEVSYQGLDTENQRLQKALENSNKKIQ
QLESELQDLEVENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKENKR
LRQQAEIKDTTLEENNVKIGNLEKENKTLFKEISIYKESCIRLKELEKENKELVKRATID
IKTLVTLREDLVSEKLKTQQMNNDLEKLTHELEKIGLNKERLLHDEQSTDDSRYKLLESK
LESTLKKSLEIKEEKIAALEARLEESTNYNQQLRQELKTVKKNYEALKQRQDEERMVQSS
PPTSGEDNKWERESQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNNNLQ
AQILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSSLENENE
AVIKEREDLKSLYDSLIKDHEKLELLHERQASEYESLIAKHGTLKSAHKNLEVEHKDLED
RYNQLLKRKGQLEDLEKTLKVEQEKMLLENKNHETMAAEYKKLCGENDRLNHTYNQLVRE
TEVLQTDHKNLKSLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKGNL
EEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQ
YKFYDPSPPRRRGNWITLKMRKLIKSKKDINRERQKSLTLTPTRSDSSEGFLQLPHQDSQ
DSSSVGSNSLEDGQTLGTKKSSMVALKRLPFLRNRPKDKDKMKACYRRSMSMNDLVQSMV
LAGGQWTGSTENLEVPDDISTGKRRKELGAMAFSTTAINFSTVNSSTGFRSKQLVNNKDT
TSFEDISPQGISDDSSTGSRVHASRPASLDSGRTSTSNSNNNASLHEVKAGAVNIQSRPQ
SHSSGEFSLLHDHETWSSSGSSPIQYLKRQTRSSPMLQHKMPDSLESRAHHKIKTGSPGS
EVVTLQQFLEESNKLTSIQIKSSSQENLLDEVMKSLSVSSDFLGKNKPVSCGLARSVSGK
TPGDFYDRRTSKPEQFVRPSPRKTEDAYFISSPGKPTLGTQGKIKLVKETSLSRQSKDSN
PYATLPRASSVISTAEGTTRRTSIHDFLTKDSRLPMSVDSPPATADSSITAASSEYLLHQ
WSSYTLHSPTHAVGSHVQNDLATRKSKSLYAQARKSRTEKSQFLNQTFAIINMSNDALGI
SAEDSGESFTVAHPSQPFLSLNTELVSNISGLPPRPITRVTDQASASLDKAAKKDNEQFS
DNQNPSNSNPQSSAGSNNLITPACFHPDDTEAALLVSEDNQTVWYEYGCV
NT seq
6093 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgagatttttactccccttctggagcagtttatgaccagccctttggtcact
tgggttaaaacgtttggacctctcgctgcaggaaatgggaccaacttggatgaatatgtg
gctttggtggatggggtattcttgaaccaggtcatgctccaaattaatcctaaatcggag
agtcagagagtaaataaaaaagtcaacaatgatgcctcacttagaattcataatctttcc
attttggtgagacagataaaattttattaccaggagactttgcagcaattgatcatgatg
tccttgccaaatgtcttaatcattggcaaaaatcctttttctgaacaaggcacagaagaa
gttaaaaagttgcttttacttttactgggttgtgcagttcagtgtcagaaaaaagaagaa
tttattgaaagaattcaaggtttagattttgatacaaaagcagcagtcgcagcacatatt
caagaggtaacccataatcaggaaaatgtgtttgatctgcaatggatggaagtgactgat
atgtctcaagaggaaatagaaccactcttgaaaaatatggcattacacctaaaaagactt
atagatgagagagatgaacattcagagactatcatagaactctctgaagaacgggatggt
cttcattttttaccgcatgcctcttcatctgcacagtcaccctgtggttctccaggcatg
aagcgaacagaaagtcgacagcatctgtcagtggaactggcagatgctaaggcaaaaata
agaaggcttaggcaggaattggaggaaaagactgaacagttgttggactgtaaacaagaa
cttgagcagatggaaatagaactaaaaaggctgcaacaagagaacatgaacttgctttcg
gatgctcgttctgctagaatgtaccgagatgaattagatgcacttcgagaaaaagctatc
agagtggataagcttgaaagtgaagtcagcagatacaaagagagactacatgatattgaa
ttttataaggcaagagttgaggaattaaaagaagacaatcaagttttattagaaacaaaa
accatgttggaagatcaattagaaggaactagagctcgttctgataaattacatgaatta
gaaaaagagaatttacaactaaaggctaaactgcatgatatggaaatggaacgtgatatg
gatagaaaaaaaatcgaagaattaatggaagaaaatatgaccttggaaatggcacagaaa
caaagtatggatgaatcattacatcttggctgggagttggaacaaatatccagaactagc
gaactttccgaagcaccacaaaaatccttgggccatgaggtgaatgagttaacatcaagc
aggttattgaaattggagatggaaaaccagagtctgacaaaaactgtcgaagaacttcgg
agtactatggattctgcagaaggcaacacttccaagatcctgaaaattgaaaaagaaaat
caaagactaagtaaaaaggttgaaattcttgaaaatgaaattattcaagaaaagcaaagt
cttcagaactgtcagaatttaagcaaggatctaatgaaggagaaagctcagcttgaaaaa
acaattgaaacacttagagaaaattcagagagacagattaaaatattggaacaggaaaat
gaacatctgaatcaaactgtgtcttccttaaggcagcgctcccagataagtgctgaagca
agggtgaaagatattgaaaaagaaaataaaattctccatgaatcgatcaaggaaacaagt
agcaagctaagcaagattgagtttgaaaaaagacaaattagaaaagaattggaacattat
aaagaaaaaggagaacgagcagaagaacttgaaaatgagttgcatcatcttgagaaagaa
aatgaattgttacagaaaaagataaccaacttaaaaattacttgtgaaaaaattgaggcc
ttagaacaagaaaattcagagctagaaagagaaaataggaaattaaaaaaaacattggat
agctttaaaaaccttacttttcagttagaatccctagaaaaagagaattcccaactagat
gaggaaaacttagaactgcgaaggaatgtggaatctttgaagtgtgcaagcatgaaaatg
gctcagctacaactagaaaataaagaactagaaagtgaaaaagagcaacttaagaagggt
ttggaactcatgaaagcatctttcaagaagacagaacgcttagaagttagctaccagggt
ttagatacagaaaaccaaaggctacagaaagctctagaaaacagcaataaaaagattcag
caattagagagtgaactacaagacttagaggtggaaaatcaaacattgcagaaaaaccta
gaagagttaaaaatatctagcaaaagactagaacagctagaaaaagaaaataaatcatta
gagcaagagacttctcaactggaaaaggataagaaacaactggagaaggaaaataaaaga
ctccgacaacaagcagaaataaaagataccacattagaagaaaataatgtgaaaattgga
aatttagaaaaagaaaacaaaactcttttcaaagagatcagtatttataaagaatcctgt
attcgtctgaaagaattagagaaagaaaataaggagcttgtgaaaagagcaactattgat
ataaaaactttggttacattacgagaggatttggtaagtgaaaaattgaagactcaacaa
atgaataatgatcttgaaaaattaactcatgagcttgagaagataggattaaataaagag
cgactcttacatgatgagcaaagtactgatgacagtaggtacaaacttttggaatcaaaa
ttagaatccactctaaagaagtcccttgaaataaaagaagaaaaaattgctgctttagaa
gctcgattagaagaatccacaaattataaccagcagttgcgccaagaacttaaaacagtg
aaaaagaattatgaagctcttaaacagagacaagatgaagaaaggatggtacagagctct
cctccaacttctggtgaagataataaatgggagcgagaaagtcaagaaacaactagagag
cttctgaaagttaaagacagattaattgaagtagaaagaaataatgctaccctgcaagca
gagaaacaagcactgaaaactcaactgaaacaattggagacacagaacaataatttgcag
gctcagattcttgcacttcagaggcagacagtgtcgttacaggagcagaatactactctt
caaacccagaatgcaaagcttcaggttgaaaattctacccttaattcccagagtacgtca
cttatgaaccagaatgcacaactcctaatccagcagtcttccttagaaaatgaaaatgaa
gctgtaatcaaagagcgagaagacctgaaatctctttatgattctctgatcaaagatcat
gaaaagctggaacttcttcatgaacgtcaggcttcagagtatgagtctctcattgctaaa
catggaactctaaagtctgcccacaaaaatcttgaggtggaacataaagaccttgaagat
cgttacaatcagttactaaaacggaaaggacaattggaagatttggaaaaaacactgaaa
gtagaacaggaaaaaatgctgcttgaaaacaaaaaccatgagactatggctgcagaatac
aagaaactttgtggtgaaaatgataggttgaatcatacatataatcagcttgtaagagaa
actgaagttttacaaactgaccataaaaacttgaaaagtcttctaaataattccaaactg
gaacaaacaagattagaagctgagttttcaaagctaaaggaacaataccaacagttggac
atcacatccaccaagctaaataaccagtgtgagttgctaagccaacttaaaggaaattta
gaagaggaaaatcgacatctactagatcaaattcagacattaatgctacagaacagaaca
ctattggagcagaatatggaaagcaaggatctctttcatgttgaacaaagacagtacatt
gataaattaaatgaattaagacgacaaaaggagaaattagaagagaagataatggatcag
tacaaattttatgacccatctcctcctagaaggagaggcaactggattactctaaaaatg
agaaaattgataaagtctaagaaagatattaatcgggaacgtcagaaatctctaacatta
acacctacccgctcagactccagtgaaggatttcttcagctcccccatcaagatagtcaa
gatagttcttcagtaggttcaaactctttagaagatggccaaactttggggaccaagaaa
agcagcatggttgcactgaaaagactgccctttttgaggaacagaccgaaggataaagac
aaaatgaaggcctgctaccgtcgttctatgtccatgaatgacctggtgcagtccatggtc
ctagcaggaggacagtggacaggtagtactgagaatttggaggttcctgatgatatttca
acgggtaaaaggagaaaagaattgggagctatggccttctctactacagccatcaacttt
tcaactgtcaactcttctacaggcttcagatccaagcagttggttaataataaagatact
acatcctttgaagacataagtccacaaggtattagtgatgattctagtacgggatcaaga
gttcatgcttcaagaccagccagccttgatagtggcagaacatccactagcaatagtaat
aataatgcttcactccatgaagtcaaagcaggtgcagttaatatccaaagcaggccacaa
agccacagcagtggagaatttagcctgcttcatgatcatgagacttggtccagcagtggt
agcagtccaatccagtacttgaaaagacagaccagatcaagtccaatgctccagcacaaa
atgcctgattcattagagagtcgagcacatcacaagatcaaaactggttcccctggaagt
gaagttgttactctacaacagtttttggaagaaagcaacaagcttacctcaatacagata
aagtcctcaagtcaagagaatcttttagatgaagtaatgaaaagtttgtctgtttcttct
gactttctgggaaaaaacaaaccagttagctgtggtctggccaggtcagtaagtggaaaa
accccaggagacttctacgatagacggacaagtaagcctgaacaatttgtgagacccagt
cctcgaaagactgaagatgcctacttcattagctctccaggaaaacctacactaggcact
caaggaaagataaaattagtaaaagaaacttctctgtcacgacaatcaaaagatagtaat
ccttacgccactttacctcgtgcaagcagtgtgatctctactgccgaaggaactactcga
aggacaagcatccatgattttttgaccaaggacagtagactacctatgtcagttgattca
ccaccagctactgctgatagcagcatcactgcagcatctagtgagtaccttttacaccag
tggtcctcttacacacttcacagtccaacccatgctgtaggatctcatgtgcaaaatgat
ttagctacacgtaaatccaagtctctctatgcccaggctagaaagtcaagaacagaaaag
tcacaatttctaaaccaaacttttgccattattaatatgtctaatgatgcacttggaata
tcagctgaagatagtggagagtcatttactgtggctcatccatctcagccatttttatcc
ctgaatacagaactagttagtaacataagtgggttacctcccaggccaatcacaagagta
actgaccaggcttctgcctctttagataaagctgcaaagaaagataacgaacagttttct
gataatcagaaccctagtaacagtaacccacagtcttctgcaggtagcaataatcttatc
actcctgcatgcttccatcctgatgacacagaagctgcattgttggtttctgaggataat
cagactgtttggtatgaatatggttgtgtttga
DBGET
integrated database retrieval system
