Zalophus californianus (California sea lion): 113937485
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Entry
113937485 CDS
T07874
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04140
Autophagy - animal
zca04148
Efferocytosis
zca05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113937485 (VPS16)
04148 Efferocytosis
113937485 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113937485 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zca04131
]
113937485 (VPS16)
Membrane trafficking [BR:
zca04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
113937485 (VPS16)
Hops complex
113937485 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
113937485
NCBI-ProteinID:
XP_027477594
UniProt:
A0A6J2F8Z9
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All DBs
Position
8:complement(110837591..110852662)
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AA seq
839 aa
AA seq
DB search
MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPWRKEKVA
SVRPVLEIYSASGLPLASLLWKSGPVVSLGWSAEEELLCVQEDGVVLVYGLHGDFRRHFS
MGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW
TTLCQERAAHILLAVGPDLYLLDHAACSAVTPPGLAPGVSSFLQMAVSFTSRHLALFTDT
GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGDAPESIQ
FVLDEDSYLVPELDGVRIFSCSTHEFLHEVPVASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGQLTQAVQQCIEAAGHEHRPDMQKSLLRAASFGKCFLDRFPPDSFVR
MCQDLRVLNAIRDYHIGIPLTYSQYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQG
VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA
LSLYRQFCKHQELETLKDLYNQDDNHQELGSFHVRASYAAEERIEGRVAALQTAADAFYK
AKNEFAAKATEDQMRLLRLQRRLEDELGGHFVDLSLHDTVTTLVLGGHSKRAEQLARDFR
IPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVG
PEQKVKALLLVGDVAQAADVAIEHRNEAELTLVLSHCTGTADAATADKIQRARAQAQKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggactgctacacggcgaactggaacccgctcggggactctgccttttaccggaagtat
gagctgtacagcatggactgggacctgaaggaggaactcagggactgcctggtagccgct
gcgccctatgggggccccattgcactgctgaggaacccgtggcggaaggagaaggtggcc
agcgtacggccagtgcttgagatctactctgcctctggcctgcctctggccagtctgctg
tggaagagtgggcccgtggtgtccctaggctggtcagctgaggaggagctgctctgcgtg
caggaagatggtgtagtgctggtctacgggcttcatggcgacttccggagacacttcagc
atgggcaatgaggtgctccagaaccgggttctagacgcccggatcttccatactgagttt
ggttcgggggtggccatcctcactggggcccaccgctttacgctcagcgccaatgtgggt
gatcttaaacttcgccggatgccggaggtgccgggtctgcagagcgcaccctcatgctgg
accacactgtgccaggagcgagctgcacacattcttctggccgtggggcctgatctttac
ctcctcgaccatgcagcctgctcggcagtgacaccccctggcctggcccccggagtgagc
agcttcctgcagatggcagtctccttcacctcccgacacctggcactcttcacagacacg
ggctacatctggatggggacggcatcactcaaggagaagctgtgtgagttcaactgcaac
atccgggccccccccaagcagatggtctggtgcagccgtcctcggagcaaagagagggct
gtcgtggtggcctgggagaggcggctaatggtggtgggtgatgcacctgagagcatccag
tttgtgctggatgaagattcctacctggtgcctgagctggatggggtccgcatcttctct
tgtagcacccatgagttcctgcatgaggttccagtggccagcgaggagatcttcaaaatt
gcctcgatggcccctggagcactgttgttggaggcccagaaagagtacgagaaagagagc
cagaaggcagatgagtacctacgggagatccaggagctggggcagctgacccaggccgtg
cagcagtgcatcgaggctgcgggacatgagcatcggccagacatgcagaagagtctgctc
agggcggcctcctttggaaagtgtttcctcgacagatttccacctgacagctttgtgcgc
atgtgtcaggacctgcgcgtgctcaatgccattcgggactaccacatcgggatccccctc
acttatagccaatacaagcagctcaccatccaggtgctgttggacaggctggtgttgagg
aggctttaccctctggcgatccagatctgtgagtacctgcgccttcctgaagtacagggt
gtcagcaggatcctggcccactgggcctgctacaaggtgcaacagaaggatgtgtccgac
gaggatgttgctcgggccattaaccagaagctgggggacacgccaggcgtctcttactct
gacattgctgcacgggcctatggctgtggccgcacggagctggccatcaagctgctggag
tatgagccacgctctggggagcaggtaccccttctcctaaagatgaagagaagcaaattg
gcactgagcaaggccatcgagagtggagacactgatctggtgttcacggtgttgctgcac
ctgaagaatgagctaaaccgaggagactttttcatgactcttcggaaccagcccatggcc
ctgagtttgtaccgacagttctgtaagcatcaggagctagagacattgaaggacctttac
aatcaggatgacaaccaccaggagttgggcagcttccacgtccgagccagctacgctgca
gaggagcgtatcgaggggcgagtcgcggctctgcagacggcagctgacgccttctacaag
gccaagaatgagttcgcagccaaggccacggaggatcaaatgcggctcctgcggctgcag
cggcgcctggaagatgagctggggggccacttcgtggacctgtctctgcatgacacggtc
accaccctcgtccttggcggccacagcaagcgcgcggagcagctggcacgtgacttccgc
attccggacaagaggctctggtggctgaagctgaccgccctggcagatctggaagactgg
gaggagctagagaagttttctaagagcaagaaatcgcccattggctacctgccctttgtc
gagatctgcatgaagcaacacaacaaatatgaggccaagaagtatgcctcccgcgtgggt
cctgagcagaaggtcaaggccttgcttctcgttggggatgtggctcaggccgcagatgtg
gccattgagcaccggaacgaagcagagctgactcttgtgttgtcccactgcactggaacc
gcagacgcggccacagccgacaagattcagcgggctagggcacaagcccagaagaagtga
DBGET
integrated database retrieval system
