Zalophus californianus (California sea lion): 113937493
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Entry
113937493 CDS
T07874
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03250
Viral life cycle - HIV-1
zca04623
Cytosolic DNA-sensing pathway
zca05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113937493 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
113937493 (SAMHD1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
113937493 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zca03400
]
113937493 (SAMHD1)
DNA repair and recombination proteins [BR:
zca03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
113937493 (SAMHD1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
HD
HD_assoc_2
PDEase_I
Motif
Other DBs
NCBI-GeneID:
113937493
NCBI-ProteinID:
XP_027477626
UniProt:
A0A6J2FAK0
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Position
8:complement(117765381..117822571)
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AA seq
627 aa
AA seq
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MQRADSEQPFKRPRCDGTPRTPPNIRSAAAETSPSPELRPNHQTWGPEQVCCFLKRSGFN
DPRLLDRFRENEITGLTLLHLNESDLESLGISTLGDRKKLHNYIQQLSEIHVDSMKVIND
PVHGHIELHPLLIRIIDTPQFQRLRYIKQLGGSYYIFPGASHNRFEHSLGVGYLAGCLVR
ALREKQPELQISARDVLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPNVEWTHEQGSVMM
FEHLVNSNGLKEVMEYYGLIPEEDICFIKEQITGPLESPIKDSSWPYKGRPKEKSFLYEI
VANKRNGIDVDKWDYFARDCHHLGIQNNFDYQRFIKFARVCEVDNRKRICTRDKEVGNLY
DMFHTRNSLHRRAYQHKVGNIIDTMITDAFLKADPYIEITGAEGKKYHISTAIDDMEAFT
KLTDNIFLEILYSSDPKLDAAREILRKIEYRNLYKYVGETKPKGKTKIEREDYKCLPEEI
ANAKPSDVVLEAELKAEDLIVDVINMDYGMEDKNPIDHVRFYCKSDLSKAVMITKDQVSE
LLPERFAEQLIRVYCKKTDAKTLFAAQQHFVQWCLIRDFTKPQDGDVVAPLITPRKMEWN
NANSAQSPDHFQKVSKSRQWLFPDDSV
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcagagagcggactccgaacagcccttcaagcggccccgatgcgatggcaccccaaga
acgccgccaaacatccgttctgcggcggcggagacgtccccgagccccgaactccgccca
aatcaccagacctggggcccggagcaggtgtgctgcttcctaaagcgcagtggcttcaat
gatccccgactgctggaccgtttccgagaaaatgaaatcacaggtttaacactgctccat
cttaatgagtctgatctcgaaagtcttggaataagtaccttgggggacagaaagaagctg
cataattatatccaacaactgagtgaaattcacgttgattcaatgaaggtaattaatgat
cctgtccatggccacattgaactccaccctctcctcatccgaatcatcgacacacctcaa
tttcagcggcttcgatatatcaaacagttgggaggcagttactacatttttccaggcgct
tcgcacaatcgatttgagcacagtctaggtgtagggtatctagcaggatgtctggttcgt
gcactgcgtgagaaacaaccagagctgcagataagtgcacgagatgtgctctgtgttcag
attgctggcctttgtcatgatctcggtcatgggccgttttctcatatgtttgatggaaga
tttattccacttgctcgcccaaatgtggaatggacgcatgaacagggctcagtgatgatg
tttgagcacctagttaattctaatggactcaaagaagtcatggaatactatggtctcatc
cctgaagaagacatttgctttatcaaggaacaaattacaggaccacttgaatcaccaatc
aaagattcttcgtggccatataaagggcgtcctaaagagaaaagcttcctttatgagata
gtggccaataaaagaaatggcatcgatgtggacaaatgggattattttgccagggactgc
catcatcttggaatccaaaataattttgattaccagcgctttattaaatttgcccgtgtc
tgtgaagtagataataggaagcgtatttgtactagagataaggaggttgggaatctgtat
gacatgttccatactcgcaactctttgcaccgcagagcttatcaacacaaagttggcaac
atcattgatacgatgattacagatgctttcctcaaagcagacccctacatagagattaca
ggtgctgaaggaaaaaagtaccacatttctacagcaattgatgacatggaagccttcact
aagctaacagataacatttttctggagattttatattcttctgatccaaaactggatgca
gcacgagagattttaagaaaaatcgaataccgtaatctatacaagtatgtgggtgagact
aagccaaagggaaaaacaaaaattgaaagggaagactataaatgccttccagaggaaatt
gccaatgctaaacctagtgacgtagtgctggaagctgaactgaaggctgaagatttaata
gtggatgttatcaacatggattatggaatggaagacaagaatcctattgaccatgttcgc
ttctattgtaagagtgacctcagcaaagcagtcatgataactaaagatcaggtttcagag
cttttgccagagagatttgcagagcagctaattcgcgtatactgcaagaagaccgatgca
aagaccttgtttgctgcacaacaacattttgttcaatggtgcttaatcagagacttcacc
aagcctcaggatggtgacgttgtagcccctcttataacacctcgaaaaatggagtggaat
aacgcgaattcagcccagagcccagatcacttccagaaagtgtccaaatctagacagtgg
ctttttccggatgactcagtgtaa
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