Zalophus californianus (California sea lion): 113937659
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Entry
113937659 CDS
T07874
Symbol
NRXN1
Name
(RefSeq) LOW QUALITY PROTEIN: neurexin-1
KO
K07377
neurexin
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113937659 (NRXN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zca04131
]
113937659 (NRXN1)
Membrane trafficking [BR:
zca04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
113937659 (NRXN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
113937659
NCBI-ProteinID:
XP_027478087
UniProt:
A0A6J2FE81
LinkDB
All DBs
Position
8:69772910..70900451
Genome browser
AA seq
1507 aa
AA seq
DB search
MGTALLQRGGCFLLCLSLLLLGCWAELGSGLEFPGAEGQWTRFPKWNACCESEMSFQLKT
RSARGLVLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVNDGAWHNVRIR
RQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTLASVREREPF
KGWIRDVRVNSSQALPVDSGEVKLDDELPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQ
AVCDCSRTGFRGKDCSQEDNNVEGLAHLMMGDQGKSKGKEEYIATFKGSEYFCYDLSQNP
IQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNG
KFNDNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP
STADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLD
PITFETPESFISLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKIAKHPQMIKVDF
FAIEMLDGHLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTA
PGESEILDLDDELYLGGLPENKAGLIFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMA
EIQSTAGVKPSCSRETAKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCEREATVLS
YDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTV
NLDCIRINCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHT
RLEFHNIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFR
NIIADPVTFKTKSSYVALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKG
YLHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGARNL
DLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGC
EGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYKWP
PNDRPSTRADRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNVGTDDIAI
EESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGNNDNERLAIARQRIPYRLGR
VVDEWLLDKGRQLTIFNSQATIIIGGKEQGQPFQGQLSGLYYNGLKVLNMAAENDANIAI
VGNVRLVGEVPSSMTTESTATAMQSEMSTSIMETTTTLATSTARRGKPPTKEPISQTTDD
ILVASAECPSDDEDIDPCEPSSGGLANPTRAGGREPYPGSAEVIRESSSTTGMVVGIVAA
AALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVVKEKQPSSAKSANKNKKN
KDKEYYV
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atggggacggcgcttctccagcgcgggggctgctttctcctgtgcctctcgctgctgctc
ctgggctgctgggcagagctgggcagcgggctggagttcccgggcgccgagggccagtgg
acgcgcttccccaagtggaacgcctgctgcgagagcgagatgagcttccagctcaagacg
cgcagcgcccgcggcctagtgctctactttgacgacgagggcttctgtgacttcctggag
ctcattctgacgcgcggtggccgcctgcagctcagtttctccatcttctgcgcggagccc
gccacgctcctggctgacacgccggtcaacgacggcgcatggcacaacgtgcgtatccgc
cggcagttccgcaacaccacgcttttcatcgaccaggtggaggccaagtgggtggaggtc
aagtcgaagcgcagggacatgacggtgttcagcggactctttgtaggggggctgcccccg
gaactgcgagccgcggcgctcaagctgacgctggcctctgtgagggagcgagagcccttt
aaagggtggattcgcgacgtgagggtcaactcctcccaggccctgccggtggacagcggc
gaggtgaagctggacgacgagctgcccaatagcggtggggggagcccgtgcgaggcgggt
gaggagggcgagggcggggtgtgcctcaacggaggcgtgtgctccgtggtggacgaccag
gcagtgtgcgactgctcgcgaaccggcttccgcggcaaggactgcagccaagaagacaac
aatgtggaaggtctggcgcacctgatgatgggcgaccaaggtaaaagtaaaggaaaagaa
gaatatattgccactttcaagggatctgaatacttctgctacgacttgtctcaaaacccc
attcaaagcagcagcgatgaaataactctgtcctttaaaactcttcagaggaatggactg
atgcttcataccgggaaatcagctgattatgtcaatcttgccctgaaaaatggagctgtc
tctctggtcattaatttgggatcaggagcctttgaagcactagtggagcccgtgaatgga
aagtttaatgataatgcctggcatgatgtgaaagtcacgaggaatctgcgtcagcactca
ggcattggacacgctatggtgacaatatcagtggatgggattcttaccacaacgggctac
acgcaagaagattataccatgctggggtctgatgactttttctatgttggaggcagtccc
agcacagcagaccttccagggtcaccagtcagtaacaactttatgggctgtctcaaagag
gttgtatataaaaataacgatgtaaggctggaattatctcgacttgccaagcaaggagac
cctaagatgaagatccacggagtggtggcattcaaatgtgagaatgttgcaactttggac
cccatcacctttgaaaccccagagtctttcatctctttgcctaaatggaatgcaaagaaa
acaggctccatatcatttgatttccgtacaacagagccaaatggcctcattttatttagc
catggcaagccaagacaccaaaagattgccaagcaccctcagatgataaaggttgacttc
tttgctattgagatgctagatggccatctctacctcctcctggacatggggtcaggtaca
ataaaaatcaaagccctgcagaagaaggtgaatgatggagaatggtatcatgtggacttc
cagagagatggacggtcaggtaccatttctgtcaacaccctgcgcacaccctacacggcg
cctggcgagagcgagattctggacctggatgatgagctgtacctggggggcttgccagag
aacaaggctggcctcattttccccaccgaggtgtggactgccctgctcaactacggctac
gtgggctgcattagagatttgttcatcgacggccagagcaaagatatccggcaaatggct
gaaattcaaagtactgctggagtgaagccctcctgctcaagggaaacagcaaaaccgtgc
cttagcaacccttgcaaaaacaatggcatgtgcagggatgggtggaacagatatgtctgt
gattgttccggaacaggctaccttggcaggtcctgtgagagagaggcaacggttctgagc
tatgatgggagtatgtttatgaaaatccagctcccagtggtgatgcacacagaggccgag
gacgtgtccttacgattccgatcccagcgtgcgtatggaatcctcatggcaaccacctct
agagactcggcagacaccctccgcctggagctggatgcagggcgtgtgaaactgacggtc
aatctagattgtatcaggattaactgtaattccagcaaaggtcccgagaccctttttgcc
ggctataacctcaatgataacgaatggcacacagtgcgtgtggtccgtcgaggaaaaagt
ttaaagttaaccgtggatgaccaacaggccatgacagggcaaatggcaggcgatcacaca
aggctggagtttcataacatagagactggcatcatcacggaacgccggtatctgtcttct
gtcccctccaatttcattggacacctgcagagcctgacatttaatggaatggcatacatt
gacttgtgtaaaaatggtgacatagattactgtgagctcaatgccagatttggcttcagg
aacatcatagcagaccctgtcaccttcaagaccaaatcgagctatgttgccttagctaca
ttgcaagcctacacttctatgcatctttttttccagttcaagacaacatccctagatgga
ctaattctatataatagtggggatggaaatgactttattgtggttgaattagttaaaggg
tacttacattatgtgtttgatttgggaaatggtgctaacctcatcaaagggagctcaaat
aaacctctcaacgacaatcagtggcacaatgtgatgatatcaagggacaccagcaatctc
cacactgtcaagatcgacacgaaaatcacaacacaaatcaccgcgggagccaggaacttg
gacctcaaaagtgacttgtatataggaggagtggctaaagaaacatacaaatctttgccg
aaacttgtccatgccaaggagggctttcaaggctgcttggcatcagttgatttaaatgga
cgacttccagacctcatctcagatgctcttttctgcaatggacagattgagagaggatgt
gaaggacccagcacaacctgtcaagaggactcctgttctaatcaaggcgtgtgcttacag
caatgggatggcttcagctgtgactgtagcatgacttccttcagtgggccactctgcaat
gaccctgggacgacatatatctttagcaaaggtggtggacaaatcacgtataagtggcct
cctaatgaccggccaagtacacgagcagacagactggccatagggtttagcactgtgcaa
aaagaagctgtgttggtgcgagtggacagttcttctggcctgggtgactacctagagctg
catatacaccaaggaaaaattggagttaaatttaatgttggaacagatgacatcgccatt
gaggagtccaatgcaatcattaacgatgggaaataccatgtagtccgttttacgaggagt
ggtggcaatgccacgttacaggtggacagctggccagtgatcgagcggtaccctgcagga
aacaatgataacgagcgcctggcgattgctagacagcgaattccatatcgacttggtcga
gtagttgatgaatggctactcgacaaagggcgtcagctcacaatcttcaatagccaagca
accataataattggcgggaaagagcagggccagcccttccagggccagctctctgggctt
tactacaatggcttgaaagttctgaatatggcagctgaaaatgatgccaacatcgccata
gtgggaaatgtgagacttgttggtgaagtgccttcctcaatgacaactgagtcaacagcc
actgccatgcagtcagagatgtccacatcaattatggagaccaccacaaccctagctact
agcacagccagaagagggaagccccctacgaaagaacccattagccagaccacagatgac
atccttgtggcctcagcagaatgtcccagcgatgacgaggacattgacccctgtgagccg
agctcaggtgggttagctaacccaacccgagccggcgggagagagccctacccaggctcg
gcggaagtgattcgggagtccagcagcaccacgggcatggtggtggggatcgtcgcggct
gctgccctgtgcatcctcatcctcctctacgccatgtacaagtacagaaaccgggatgaa
ggctcataccatgtggacgagagtcgaaactacatcagtaactcagcacagtccaatggg
gctgtcgtaaaggagaaacaacccagcagtgcgaaaagcgccaacaaaaataagaaaaac
aaggataaagagtattacgtctga
DBGET
integrated database retrieval system
