Zalophus californianus (California sea lion): 113937660
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Entry
113937660 CDS
T07874
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zca03016
]
113937660 (TRMT13)
Enzymes [BR:
zca01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
113937660 (TRMT13)
Transfer RNA biogenesis [BR:
zca03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
113937660 (TRMT13)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
113937660
NCBI-ProteinID:
XP_027478093
UniProt:
A0A6J2FFH7
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Position
4:84417861..84438562
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AA seq
481 aa
AA seq
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MAASAPAPHTTDFPAEGRCSYYVEKKRRFCRMVVAAGKRFCGEHAGAAEEENARKRILCP
LDPKHTVYEDQLAKHLKKCNSREKPKPDFFIQDINAGLKDGTEKPEQLVPISSLSEEQLE
NLIKKLRKASEGLNSTLKDQIMSHPALHDALNDPKNGDSATKHLKQQASILGNIEKLKLL
GPRRCFVEFGAGKGKLSHWVDIALKDAEKVHFILVEKVTTRFKVDGKHRKKNSVFERLQI
DIQHLCLNKIPLLSKEKLPVVGIGKHLCGVATDLALRCLVETYAASCEERNEEPLAKRIK
NDKTEKEINTLAKEGNEKNVPEKWSPVAGIVIALCCHHRCDWRHYVGKEYFRALGLGAVE
FHYFQRMSSWATCGMRKTSLEASNLTTKRKDKQNDDSEEHDDGGCIITDESTERVPGFLT
VEEKKKIGHLCKLLIDQGRVEYLQQKGFSPALQYYTDPLVSLENVLLTALPNHSSSPETT
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttctgcgccggccccgcacacgactgactttccggctgagggtcggtgcagt
tactatgtggaaaagaagaggaggttctgcaggatggtggtggcggcagggaaaagattc
tgtggggaacacgctggagccgcggaggaagaaaatgctcggaaaagaattctgtgtcct
ttagatccaaaacacacagtatatgaagatcaactagcaaagcatttgaaaaaatgtaac
tcaagagagaagccaaaacctgacttctttattcaagatattaacgcaggcttaaaagat
ggaacagaaaaacctgaacagttagttccaatttcttctctctctgaagagcagttggaa
aacttaattaagaaattgaggaaagcaagtgaaggtttgaactctacacttaaagatcaa
attatgtcccatccagcattgcatgatgcccttaatgaccctaaaaatggtgattctgca
accaaacacctgaaacagcaggcttctattttaggtaacattgaaaaattaaagttactt
ggtccaagaagatgctttgttgaatttggagcaggaaagggaaaattatctcattgggtt
gatattgccttaaaagatgctgaaaaagttcacttcatcctagtagaaaaggtgaccaca
agattcaaggtagatggcaaacacagaaagaaaaattcagtatttgagagacttcaaatt
gatattcaacacttgtgtttgaataagattcctttgctaagcaaagaaaaactacctgtg
gtaggaattggaaagcatctgtgtggtgtggcaacagatcttgcattacgatgtttggtt
gaaacctatgctgccagttgtgaggaaaggaatgaagaacctttagccaaacgcataaag
aatgataaaacagaaaaagaaattaacactttggccaaggaaggaaatgagaaaaatgtc
ccagagaagtggagccctgtggctggcattgttattgcactctgttgtcaccacaggtgt
gattggagacattatgtgggcaaagagtatttcagggctctaggccttggagcagtggaa
ttccactacttccagcgaatgagtagttgggcgacttgtgggatgcgaaaaacatctttg
gaagcctccaatcttaccacaaagagaaaagataagcagaatgatgacagtgaagagcat
gatgacgggggatgcataatcacagacgaaagcaccgagagagtccctgggttccttact
gttgaagaaaagaagaaaatagggcatctttgtaaattgctgattgaccaaggccgagtc
gagtatttacagcagaaaggattcagtcctgctttacagtattatacagatcctctggta
tctttggaaaatgtattgttaactgctttaccaaatcattcgtcatcaccagaaacaact
gcttaa
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