Zalophus californianus (California sea lion): 113937822
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Entry
113937822 CDS
T07874
Symbol
VPS54
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 54
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zca01009
]
113937822 (VPS54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zca04131
]
113937822 (VPS54)
Protein phosphatases and associated proteins [BR:
zca01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113937822 (VPS54)
Membrane trafficking [BR:
zca04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
113937822 (VPS54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
SBP_bac_6
YqzH
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
113937822
NCBI-ProteinID:
XP_027478485
UniProt:
A0A6J2FAY9
LinkDB
All DBs
Position
8:58184738..58273575
Genome browser
AA seq
965 aa
AA seq
DB search
MASSHSSSPVPQGSSSDVFFKKEVDPTKHIRPVQSLPDVCPKEPTVTDQHRWTIYHSKVN
LPAALNDPRLAKRESDFFTKTWGLDFVDTEVIPSFYLPQISKEHFTIYQQEISQREKIHE
RCKNXCPPKDTFDRTXLHTHDKSRTDLEQVPKIFMKPDFALDDSLTFNSVLPWSHFNTAG
GKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHELQDYLKKTSQAV
KMLRDKIAQIDKVMCEGSLHILRLALTRNNCVKVYNKLKLMATVHQTQPTVQVLLSTSEF
VGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFSTYSHSDLNRPLED
DCQILEEERLVSLVFGLLKQRKLNFLEIYSEEMIITAKNIIKQCVINKVSQIEEIDTDVV
VKLADQMRMLNFPQWFDLLKDIFSKFTIFLQRVKATLNIIHSVVLSVLDKNRRTRELEEI
SQQKNATKDNSLDTEVAYLIHEGMFISDAFVESELTPLVIDTTSQRNASPNSEPCSSDSV
SEPECTTDSSSSKEQTSSSATPGGVDIMVNEDMKLTDLELEKLANNIQELLYSASDICHD
RAVKFLMSRAKDGFLEKLNSTEFITLSRLMETFILDTEHICGRKSMSLLGALQSQANKFV
NRFHEERKTKLSLLLDNERWKQADVPAEFQDLVDSISDGKIALPEKKSGATEERKPAEVL
IVEGQQYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLSDLLKYFNSRSCQLVLGAG
ALQVVGLKTITTKNLALSSRCLQLIVHYIPVIRAHFEARLQPKQYSMLRHFDHITKDYHD
HIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMAKMHEAIFDLLPEEQTQM
LFLRINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALKGLKDLDLNMSEI
WEQKR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagccacagttcttcaccagtgcctcaaggaagcagcagtgatgttttcttt
aaaaaagaggtagacccaacaaaacacattcgacctgtgcagtcactgccagatgtatgt
cccaaggaacccacagttacagatcaacatagatggactatatatcattccaaagtaaac
ctcccagcagcattaaatgatcctagattagcaaaaagagaatctgacttcttcacaaaa
acatggggattggactttgtggacactgaagtcataccttcattctacctcccacagatc
agcaaggaacattttacaatttatcaacaggaaatctctcagagagagaagattcatgag
agatgcaagaatnattgtcctcctaaagatacctttgacaggactnctctacatactcat
gataaatccaggacagatctggagcaagtacctaagatttttatgaaaccagattttgcc
ttggacgattccttaacttttaattcagttttaccatggtctcattttaatactgctggt
ggaaaaggaaatcgtgatgcagcttcctcaaagttgctgcaagaaaagctgagccattat
ctggatattgtggaagtaaacattgctcaccagatctctctacgttctgaagcatttttt
catgcaatgacctctcaacacgaattgcaggactacctcaagaaaacttcccaggctgta
aagatgcttcgagataaaattgcacagattgataaagtaatgtgtgaaggatcactacac
attttaagactggcacttaccagaaacaattgtgttaaagtgtacaataaactcaagtta
atggccactgtacaccagactcagcctacagtacaggtgttgttatccacttctgaattt
gttggagcattggacttaatagcaacaacacaagaggttctacagcaggagcttcagggc
attcacagcttccggcatttgggatcacaactttgtgaattagaaaaactgatagataaa
atgatgattgcagaattttctacttattctcacagtgacttaaacagaccactggaagac
gattgtcaaattttagaagaggaaagacttgtatctcttgtatttggacttttaaaacaa
agaaaacttaattttttagaaatctatagtgaagaaatgattattacagcaaagaatatc
attaaacagtgtgtgattaataaagtttcacaaatagaagaaattgacacagatgttgtt
gtgaagcttgcagatcagatgagaatgttgaattttcctcagtggtttgatctgctaaag
gatattttctctaagtttacaattttcctacaaagagttaaggcaacgttaaatatcatt
cacagtgttgttctctcagttcttgacaaaaaccgaaggaccagagaattggaggagatt
tcacaacagaaaaatgctacaaaagacaattcactggacacagaagtggcttatttaatc
catgaaggcatgtttataagtgatgcattcgttgagagtgaattaacacctttagtgatc
gacactacctctcaaagaaatgcatctccaaatagcgagccctgcagcagtgattcggta
tccgaaccagaatgtactactgattcttcatccagcaaagagcagacatcatcatctgct
actccaggaggtgtggatattatggtcaatgaagacatgaaattaactgatttagagcta
gaaaaactggcaaataatatccaagagttattgtatagtgcctcagatatatgccatgat
cgagctgtcaaatttctcatgtcaagagcaaaggatggttttcttgagaagctaaattcc
acggaattcataacactttctagattaatggaaacattcattttagatactgaacacatc
tgtggaagaaaaagtatgtcattacttggagcacttcagagccaagctaataaatttgta
aataggtttcatgaagagagaaaaactaagctcagcctcctcttagataatgagcgctgg
aagcaagctgatgttcctgcagaatttcaggatcttgttgattctatatcagatggaaag
attgctttacctgaaaaaaaatcaggggctacggaagaaaggaaaccagctgaagttctc
attgttgagggacaacagtatgctgtcgttggaactgtattgctgttgataagaattatc
cttgaatattgccagtgtgtggacaatatcccatctgttactactgacatgcttactcgt
ctgtcagatttattgaagtacttcaattcaagaagttgccagttagttcttggagctggt
gcactgcaagttgttggactaaaaacaataactacaaaaaatttggctctttcttcacgt
tgtttgcagttaattgtgcactacattcctgtgatcagggctcattttgaagctcgactg
cagcctaagcaatatagcatgcttaggcattttgatcatatcactaaggactaccatgac
cacatagctgaaatatcagctaagcttgtagcgataatggatagcttatttgacaagttg
ttatctaagtatgaggtgaaagctcccgttccttctgcctgtttcaggaatatttgtaag
caaatggcaaaaatgcatgaagctatatttgatcttcttccagaagaacaaacacaaatg
ttatttttaagaattaatgcaagttataaactccacttgaaaaagcagttatctcattta
aatgtgataaatgatggaggacctcaaaatgggttggtcacagcagatgtagctttttac
actggaaatcttcaagccttaaaaggccttaaagatttggacctaaatatgtccgagatc
tgggaacagaagaggtga
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