Zalophus californianus (California sea lion): 113937860
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Entry
113937860 CDS
T07874
Symbol
CDH4
Name
(RefSeq) cadherin-4 isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
113937860 (CDH4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zca04515
]
113937860 (CDH4)
Cell adhesion molecules [BR:
zca04515
]
Cadherins
Major cadherins
113937860 (CDH4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_4
Stevor
Motif
Other DBs
NCBI-GeneID:
113937860
NCBI-ProteinID:
XP_027478554
UniProt:
A0A6J2FBQ9
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Position
8:138267044..138802988
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AA seq
914 aa
AA seq
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MTAGSGVLLVLLSLSGALRAHNGDVTARETCKAGFSEEDYTALISENILEGERLLKVTFS
SCLGTKGTWYETNSLDFKVEADGTVFATRELRIPSEQVAFTVTAWDRQTAERWDAVVRLL
VAQPSFAHSTHKKGKQSAALDASQPPSDMLLPWPQHRNANGLRRQKRDWVIPPINVPENS
RGPFPQQLVRIRSDKDNDIPIRYSITGVGADQPPMEVFSIDSMSGRMYVTRPMDREERAS
YHLRAHAVDMNGNKVENPIDLYIYVIDMNDNRPEFINQVYNGSVDEGSKPGTYVMTVTAN
DADDSTTANGMVRYRIVTQTPQSPSQNMFTINSETGDIVTVAAGLDREKVQQYTVIIQAT
DMEGNLNYGLSNTATAIITVTDVNDNPPEFTASTYAGEVPENQVEVVVANLTVMDRDQPH
SPNWNAFYRIISGDPSGHFSIRTDPVTNEGMVTVVKAVDYELNRAFMLTVMVSNQAPLAS
GIQMSFQSTAGVTISVMDINEAPYFPSNHKLIRLEEGVPTGTALTTFSAVDPDRFMQQAV
RYSKLSDPANWLHINATNGQITTAAVLDRESLYIRNNVYEATFLAADNGIPPASGTGTLQ
IYLIDINDNAPELLPKEAQICEKPSLNAINITAADADVDPNIGPYVFELPFVPAAVRRNW
TITRLNGDYAQLSLRILYLEAGVYDVPITVTDSGNPPLSNTSIIKVKVCPCDENGDCTTV
GAVVAAGLGTSAIVAILICIVILLTMVLLFVVWMKRREKERHTKQLLIDPEDDVRDNILK
YDEEGGGEEDQDYDLSQLQQPETMEHVLSKAPGVRRVDERPVGAEPQYPVRPVVPHPGDI
GDFINEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSSSGDQDYDYLNDWGPR
FKKLADMYGGGEED
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgggttccggcgtgctcctcgtgctgctgtcgctctctggcgcgctccgggcc
cataatggggatgttacagccagggagacctgcaaggctggattctctgaagaagactac
acggcattaatctcggaaaatattctggaaggagagaggctactcaaagtcacgttcagc
agctgtttggggaccaaggggacgtggtatgagaccaacagcctggacttcaaagtggag
gcggacgggacggtctttgccacgcgggagttgcggatcccctccgagcaggtggcgttc
accgtgaccgcgtgggaccgccagacggccgagcgatgggacgccgtggtgcgcctgctg
gtggcccagccctcgttcgcccactccacacacaagaaagggaagcagagtgctgctctg
gacgcctcccagcctcccagtgacatgctgttgccgtggccccagcaccggaacgccaac
gggctgagaagacagaaacgtgactgggtcatcccaccgatcaacgtgccggaaaattcc
cgcgggcccttcccacagcagctcgtgcggatccggtctgacaaagacaatgacattccc
atccggtacagcatcacgggcgtgggtgccgaccaaccccccatggaggtcttcagcatc
gactctatgtctggacggatgtatgtcactcggcccatggatcgggaggaacgagcctcc
taccacctcagagcgcacgcagtggacatgaacggcaacaaggtggagaaccccatcgac
ctgtacatctatgtcatcgacatgaatgacaaccgtcccgagttcatcaaccaggtctac
aacggctccgtagacgagggttccaagccaggcacctatgtgatgaccgtcacggccaat
gacgcggacgacagcaccacggccaacgggatggtgcggtaccggatcgtgacccagacc
ccgcagagcccgtcccagaacatgttcaccatcaacagcgagacgggggacattgtgacc
gtggcagctggcctggaccgagagaaagttcagcagtacaccgtcatcatccaagccaca
gacatggaggggaacctcaactacggcctctcgaacacagccacggccatcatcacggtg
acggacgtgaatgacaacccgccggagttcacggcgagcacgtacgctggggaggtcccc
gaaaaccaggtggaggtggtggtcgcaaacctcactgtcatggaccgagatcagccccac
tcgcccaactggaatgccttctaccgcatcatcagcggggacccctcaggacacttcagc
atccgcacggaccccgtcaccaacgagggcatggtcaccgtggtgaaggcagtagactac
gagctgaacagagcgttcatgctgactgtgatggtgtccaaccaggcgcccctggccagt
gggatccagatgtccttccagtccacggcaggagtgaccatctccgtcatggacatcaac
gaggcgccctacttcccctccaaccacaagctgatccgcctggaggaaggtgtacccacc
ggcaccgcactgaccacgttttcggcagtggaccctgaccggttcatgcagcaggccgtg
aggtactccaagctgtcggacccagcaaattggctgcacattaacgccaccaacggtcag
atcaccacagcagccgtccttgaccgcgagtccctctacatcagaaacaacgtctatgag
gccaccttcctggcagctgacaacgggatccccccagccagcggcaccgggaccctccag
atctatctaatcgacatcaatgacaacgcccccgagctgctgcccaaggaggcacagatc
tgcgagaagcccagcctgaacgccatcaacatcacagcggccgatgccgacgttgaccct
aacatcggcccctatgtcttcgagctgcccttcgtcccggccgctgtgcggaggaactgg
accatcacccgcttaaacggtgactacgcccagctgagcctgcgcatcctgtacctggag
gctggcgtgtacgacgtccccatcaccgtcaccgactccgggaaccccccgctgtccaac
acgtccatcatcaaggtcaaggtgtgcccgtgcgacgagaatggggactgcaccaccgtc
ggcgcggtggtcgcggccggtctgggcaccagcgccattgtggccatcctcatctgcatt
gtcatcctgctcaccatggtcctgctgttcgtcgtgtggatgaagcgcagggagaaggag
cgtcacaccaagcagctgctcatcgaccccgaggacgatgtgcgtgacaacatcctcaag
tacgacgaggaagggggcggtgaggaggaccaggactacgacctcagccaactgcagcag
cctgagaccatggagcacgtgctgagcaaggcccccggcgtgcggcgggtggacgaacgg
cccgtgggcgccgagccccagtaccctgtcaggcctgtggtgccccacccgggagacatc
ggggacttcatcaacgagggactccgcgccgccgacaacgaccccacagcacccccctac
gactccctgctggtcttcgactacgaagggagcggctctacggcaggctccgtcagctcc
ctgaactcgtccagctccggggaccaagactacgattacctgaatgactgggggcccagg
ttcaagaagctggcggatatgtacggagggggtgaggaggactga
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