Zalophus californianus (California sea lion): 113938212
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Entry
113938212 CDS
T07874
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca01524
Platinum drug resistance
zca03430
Mismatch repair
zca05200
Pathways in cancer
zca05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113938212 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
113938212 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
113938212 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
113938212 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zca03400
]
113938212 (MSH2)
DNA repair and recombination proteins [BR:
zca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
113938212 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
113938212
NCBI-ProteinID:
XP_027479299
UniProt:
A0A6J2FH37
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Position
8:complement(72873683..72949057)
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AA seq
934 aa
AA seq
DB search
MAVQPKETLQLESAAEVGFVRFFQAMPEKPTTTVRLFDRGDFYTAHHEDALLAAREVFKT
QGVVKYIGPAGTKTLESVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSASIGVVGVKISTVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQVIQRGGILITERKRADFFTKDIYQD
LNRLLKGKKGEQVNSAVLPEMENQVAASALSAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA
LEKYEGKHQSLLLAVFVTPFIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMDDLEKKMQSTLVSAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNGAPVPYVRPVILEKGQGKITLKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IECARQKALELEEFQNIGDSQGYDDMEPAAKRCYLEREQGEKIIQEFLSKVKQVPFTEMS
EENITMKLKQLKAEVIAKNNSFVNEIISRIKVTT
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaggaaacgctgcagctggagagcgcggccgaagtcggcttcgtg
cgcttcttccaggccatgccggagaagccgaccaccacggtgcgcctcttcgaccggggc
gacttctacacggcgcaccacgaggacgcgctgctggctgcccgagaagtgttcaagacc
cagggggtagtcaagtacatagggccggcaggaacaaagactctggagagtgttgtgctt
agtaaaatgaattttgaatcttttgtaaaagatcttcttctagttcgccagtatagagtt
gaagtttataagaatagagctggaaataaagcctcaaaggagaatgattggtatctggca
tttaaggcttctccaggtaatctttctcagtttgaagacattctctttggtaacaatgat
atgtcagcttccattggtgttgtgggtgttaaaatatctacagttgatggccaaagacag
gtcggagttgggtatgttgactccatacagcggaagctaggactttgtgagttccccgac
aatgatcagttctccaatttggaggctctcctgattcagattggaccaaaggaatgtgtt
ttaccaggaggagagactgctggagacatgggaaaactgaggcaggttattcagagagga
ggaattctgatcacagaaagaaaaagagctgacttttttacaaaagatatttatcaggac
ctcaaccggttgttgaaaggcaaaaagggagaacaggtgaatagtgctgtcttgccagaa
atggagaatcaggttgcagcttcagcattgtctgcagtaatcaagtttttagaactctta
tcagatgattcaaactttggacagtttgaactgactacttttgacttcagccagtacatg
aagttggatattgcagcagtcagagcccttaaccttttccaggggtctgttgaagatact
actggctctcagtctctggctgcattgctgaataaatgcaaaacccctcaaggacaaaga
ctggttaaccagtggattaagcagcctctcatggataagaacagaatagaagagagactg
aatttagtggaagcttttgtagaagatgcagaattgaggcagagtttacaagaagattta
cttcgtcgattcccagatcttaaccgacttgccaagaaatttcagagacaagcagcaaac
ttacaggattgttaccgactctatcagggtataaatcaactccctaatgttattcaggct
ctggaaaaatatgaaggaaaacaccagagtttattgttggcagtttttgtcactcctttt
attgatcttcgttctgatttctccaaatttcaggaaatgatagaaacaactttagatatg
gatcaggtggaaaaccatgaattccttgtgaaaccttcatttgatcccaatctgagtgaa
ttgagagaaattatggatgacttggaaaagaagatgcagtcaacattagtaagtgcagcg
agagatttaggtttggatcctggcaaacagattaaactggattccagtgcacagtttggt
tattactttcgcgtaacatgtaaggaagaaaaagtccttcgtaacaataaaaacttcagt
acggtggacattcagaagaatggtgttaaatttaccaacagtaaactgacttctctcaat
gaagagtataccaaaaataaaaccgagtatgaggaagcccaggatgccattgttaaagaa
attgtcaatatttcttcaggctatgtagaaccaatgcagacactcaatgatgtgttagct
cagctagatgctgttgtcagctttgcacatgtgtcaaatggagcacctgttccatatgta
cgaccggtcattttggagaaaggacaaggaaaaattacattgaaagcatccagacatgct
tgtgttgaagttcaagatgaagttgcatttattcctaatgatgttcactttgaaaaagat
aaacagatgttccacatcattactggccccaatatgggaggtaaatccacatatattcgc
caaactggggtgatcgttctcatggcccagattgggtgttttgtgccatgtgagtcagca
gaagtgtccattgtggactgcatcctggcccgtgtaggggctggcgacagtcagttgaaa
ggagtctccacattcatggctgaaatgctagaaactgcttctattctcaggtctgcaacc
aaagattctttaataatcatagatgaattggggagaggaacctctacctatgatggattt
ggattagcgtgggctatatcagagtacatcgcaacaaagattggtgctttttgcatgttt
gcaacacattttcatgaacttactgccttggccaatcagataccaactgttaataatcta
catgtcacagcactaactactgaagagaccttaactatgctttatcaggtgaagaaaggt
gtctgtgatcaaagttttgggattcacgttgcagagcttgcaaatttccctaggcatgtc
atagagtgtgctagacagaaagctctggaactagaggagtttcagaatatcggagattca
caaggatatgatgacatggaaccagcagcaaagaggtgctatctggaaagagagcaaggt
gaaaaaattattcaggagtttttatccaaggtaaagcaagtgccttttactgaaatgtca
gaagaaaacatcacaatgaagctaaaacagctgaaagctgaggtaatagcgaagaataat
agttttgtaaatgaaatcatttcacgaatcaaagttactacatga
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