Zalophus californianus (California sea lion): 113938251
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Entry
113938251 CDS
T07874
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113938251 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zca04121
]
113938251 (TRIM54)
Ubiquitin system [BR:
zca04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113938251 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
UvrD_C
DUF349
MIF4G_like_2
Sina_RING
COG2_C
DUF1421
SpoIISA_toxin
Zn_ribbon_FGT1_2
Tautomerase_3
DUF5799
Spectrin
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
113938251
NCBI-ProteinID:
XP_027479359
UniProt:
A0A6J2FH99
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All DBs
Position
8:22397268..22417699
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AA seq
363 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDIFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFEALCSVLEERKAELLQTLAREQE
EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVRAMSKVELAG
RPEPGYESMEQFTVSLEHVAEMLRTIDFQPGASGEEEDEEVALDGEEGSAGPEEERPEGT
GGH
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcacagtgggtttcaagccgctgctaggggatgcacacagcatggacaacctg
gagaagcagctcatctgccccatctgcctggagatgttctccaaaccagtggtgatcctg
ccctgccagcacaacctgtgtcgcaagtgtgccaacgacatcttccaggcctcaaaccct
ctgtggcaatcccggggctccaccaccgtgtcttcggggggccgtttccgctgcccatct
tgcaggcatgaggttgtcctggacagacatggtgtctatggcctgcagcgaaacctgcta
gtggagaacatcatcgacatttacaagcaggagtcttcccggccactgcactccaaggct
gagcagcacctcatgtgcgaggagcacgaagaagagaagatcaacatctactgcctgagc
tgtgaagtgcccacctgctctctctgtaaggtctttggcgcccacaaggactgtgaggtg
gccccgttgcccaccatttacaaacgccagaagagcgagctcagcgatggcatcgcgatg
ctggtggcgggcaatgaccgtgtgcaagcagtgatcacacagatggaggaagtgtgccag
accatcgaggacaacagccggaggcagaagcagttgcttaaccagaggttcgaggccctg
tgctcggtgctggaggagcgcaaggctgagctgctgcagacgctggcccgcgagcaggag
gagaagctgcagcgcgtccggggcctcatccgccagtatggagaccacctggaagcctcc
tccaagctcgtggagtccgccatccagtccatggaggagccacagatggcgctgtacctg
cagcaggccaaggagctgatcaataaggtcagggcaatgtcgaaagtggagctggcagga
cggccagagccgggctacgaaagcatggagcagttcaccgtgagcttggagcacgtggcc
gaaatgctgaggaccatcgacttccagccgggcgcttccggggaggaagaggatgaggag
gtggcattggacggggaagagggcagcgcagggcctgaggaagagcggccggaaggcaca
ggcgggcactga
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integrated database retrieval system
