Zalophus californianus (California sea lion): 113938336
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Entry
113938336 CDS
T07874
Symbol
APLF
Name
(RefSeq) aprataxin and PNK-like factor isoform X1
KO
K13295
aprataxin and PNK-like factor [EC:3.1.-.-]
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zca03400
]
113938336 (APLF)
DNA repair and recombination proteins [BR:
zca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
113938336 (APLF)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
113938336 (APLF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHH
FHA_2
FHA
Yop-YscD_cpl
HUN
POLR1D
Motif
Other DBs
NCBI-GeneID:
113938336
NCBI-ProteinID:
XP_027479554
UniProt:
A0A6J2FHV6
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All DBs
Position
8:complement(54172327..54260433)
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AA seq
513 aa
AA seq
DB search
MSGGFELQPQDGGPRVALAPGETVIGRGPLLGITDKRVSRRHAILEVVGGQLRIKPIHTN
PCFYQSSEKSQLLPLKRNLWRWLNPGDSFSLLVDKYIFCVFSTHSETEMECTLRNSQMLD
EDNILNETPKSFSVHPPDETTGAPQLERSTEIPKTQTTSANNECFLGECRDLSKQQSNPA
QRRRILPAWMLTENLSDQKLSAPVSSGDNNIIQESGKEGICKDKTQVNITQQGRKRLISS
GDSESTSAEQDTGKKCKNADQEESVTSSKAMPKSCSAISLSNAEVNDMKANIQRNEIPIE
ELGKVPEHKSIVKGTQSKEGEEMSCSESHLSAQDKSFHEESQGSPPESSSDLSNLETLPA
KATASVAQGSEENKVRRTSCMYGANCYRKNPVHFQHFSHPGDSDYGGVQVMCQDEADDRP
ECPYGASCYRKNPQHKIEYRHSALPVRSVSDEDSDNVGQPNEYDLNDSFLDDEEEEYEPT
DEDSDWEPGQEDQEKEDVEELLKEAKKFMKRKK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggggcttcgagctgcagccgcaggacggcggcccccgggtggccctggccccc
ggggagacggtgatcggccgcgggccgctgctgggaataacagacaagagagtgtccaga
agacatgccattcttgaggtggtcggtggtcagcttcgaatcaaaccgatacacacaaat
ccatgtttttatcagtcttccgagaagagccagctcttaccattgaagagaaatctatgg
cgctggttgaatcctggagacagtttttctttgctagttgacaaatacattttctgtgtt
ttctctacacactctgaaacagaaatggaatgtactttaagaaatagtcagatgcttgat
gaagataatatactgaatgaaacaccaaaatctttctcagttcacccgcctgatgagaca
actggtgccccacaactggaaagaagcacagaaatacctaagacccaaactacttctgca
aataatgagtgtttcctaggtgaatgtagagacctcagtaagcaacagtcaaaccctgcg
cagaggagaagaatccttccagcatggatgttaacagaaaatctcagtgatcaaaaactt
tcagcaccagtcagcagcggggataataatataatccaggaaagtggaaaagaaggaatc
tgcaaagataaaactcaagtaaacataacacagcaaggaagaaagcgattaatttcatca
ggagattcagaaagtacatctgcagaacaagacacagggaaaaagtgcaaaaatgctgat
caggaagagtctgtcacttcatccaaggcaatgccaaagtcatgttctgcaatctcatta
agtaatgcagaggtgaatgatatgaaggctaatatacagagaaatgaaatcccaatagag
gaacttgggaaggttcctgaacataaaagtattgtgaaaggaacacaaagtaaagaaggc
gaggagatgagctgttctgagagtcacttgagtgcccaggacaagtccttccatgaggag
tctcaaggatctcctcctgagtccagctctgatctctccaatcttgaaactttgcctgca
aaggcaactgcctcagttgcacaaggttctgaagaaaacaaggtcaggaggacatcttgc
atgtatggggcaaactgctacaggaagaatcctgttcatttccaacacttcagtcaccct
ggtgatagtgattatggaggtgtacaagtcatgtgtcaagatgaggctgatgaccgacct
gaatgtccctatggagcatcctgttataggaagaatccccagcacaagatagaatacaga
catagtgcacttccagtgagaagcgtatcagatgaagacagtgataatgttgggcaaccc
aatgagtacgacctcaatgacagctttctagatgatgaggaagaagaatatgagccgaca
gatgaagattctgactgggaaccaggacaggaagaccaagagaaggaagatgtggaagag
cttttgaaagaagcaaaaaagtttatgaaaaggaaaaagtaa
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