Zalophus californianus (California sea lion): 113938389
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Entry
113938389 CDS
T07874
Symbol
DHX57
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57 isoform X1
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
zca03012
]
113938389 (DHX57)
Enzymes [BR:
zca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113938389 (DHX57)
Translation factors [BR:
zca03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
113938389 (DHX57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
RWD
Helicase_C
DEAD
HA2_C
zf-CCCH
zf-CCCH_4
HA2_N
Torus
zf_CCCH_4
zf-CCCH_2
AAA_22
nSTAND3
NB-ARC
AAA_14
AAA_19
UBA
NPHP3_N
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
113938389
NCBI-ProteinID:
XP_035584692
UniProt:
A0A6P9FMK2
LinkDB
All DBs
Position
8:complement(32041684..32095532)
Genome browser
AA seq
1389 aa
AA seq
DB search
MSVLVFLLQVKMSSSVRRKGKPGKGGGKGSSRGGREGRSHTSRSHGGGGGAGNRKASSRM
WDDGDDFCIFSESRRSSRPSNSSIRKGEARPKWKPEAKVPLQTLHMTSENQEKVKALLRD
LQEQDADAGSERGISGEEEDDEPECDDEQYWSAGREASLVPDCDPLEYAGSGPGEPHSPE
FTVSTFAVQKLSRYGFNTERCQAALRICDGDVGASLEHLLTQCFSETFGEKMKISEAVAH
VSLDECVEQRQEEAFALKSICGEKFIERIQNRVWTIGLELEYLTSKFCKSKQKESTKNAQ
DTTLEICKFYLKGNCKFGSRCKFKHEVPPNQIVGRAERIVDDSHLNAHEDASFLYELEIR
FSKDHKYPYQAPLVAFYSTNENLPLACRLHISEFLYGKALTFAETSEPVVYSLITLLEEE
SEIVNLLTNTHHKYSVPPVNFLPVSSGTRINNAVCRKPVIPSNSFASNKIPEVEKESEPE
EETDEDEGPAPVIVENESYVNLKKKISKRYDWQAKSVHAENAKICKQFRIKQASRQFQSI
LQERQSLPAWEERETILKLLSEHQVLVISGMTGCGKTTQIPQFILDDSLNGPPEKVANII
CTQPRRISAISVAERVAKERTERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDI
ALQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPTLQVILMSATLNAELFSEYFSSCPV
ITIPGRTFPVDQFFLEDAIAVTRYVLQDGSPYMRSMKQMTKEKLKARRSRTAFEEVEEDL
RLSLHLQSQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMSIMDFEKVNLELIEALLEW
IVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHSSLSSEEQQA
VFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQAN
ALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNL
QSVFSRLIEPPHTDSLRASKIRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLFGSI
FRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLRAYKGWQLSTKE
GMRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGFVKEGLRAREIEKRAQGGDGILG
ATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVRMQPKSDELKFVTK
NDGYVHIHPSSVNYQVRHFDSPYLVYHEKIKTSRVFIRDCSMVSVYPLVLFGGGQVSVQL
QRGEFVVSLDDGWIRFAAASHQVAELVKELRCELDQLLQDKIKNPSIDLCTCPRGSRIIS
MIVKLVTTQ
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtattagtttttctcttgcaggtgaaaatgagttcctcggtaagaagaaaaggc
aagccgggcaaaggaggtggaaaagggtcttctagaggaggaagggaaggcaggagtcac
acgagcagatctcacgggggcggtggtggtgccggcaataggaaagcctcgagcagaatg
tgggatgatggcgatgacttttgcatcttcagtgaatcgaggcgctcatccagacctagc
aacagtagcataagaaaaggagaggcacgccccaaatggaagcctgaagccaaagtgccc
cttcaaaccctgcacatgacttctgagaaccaagagaaagtgaaagctcttctccgggac
ctccaagaacaagatgcggatgctggatctgaaagaggcatttctggggaggaggaagat
gacgagcctgagtgtgatgatgaacagtactggtctgctggacgagaagcttcccttgtt
cctgactgtgaccctttggaatatgctggctcaggcccaggggagcctcatagtccagaa
tttacagtctcaacatttgcagtgcagaaactttccaggtatggcttcaacactgaacgc
tgtcaggcagccctgaggatttgtgatggagatgtgggggcatcactagaacatctgctc
acacagtgtttttcagagacatttggggagaagatgaagatctctgaggcagttgcccat
gtaagcttggatgagtgtgtggaacagcggcaggaagaggcatttgctctcaagtccatc
tgtggagagaaatttatagaaagaattcagaaccgagtctggaccattggattagaactg
gagtatttgacgagtaaattctgcaaatccaagcaaaaggaaagtaccaaaaatgcacag
gacactacacttgaaatctgtaaattttacctcaaaggaaattgcaaatttggatcaaga
tgcaaattcaaacatgaagtgcccccaaatcaaattgttggaagagcagaaagaattgta
gatgattctcatcttaatgcccatgaagatgcctcttttttatatgaacttgaaattcga
ttttctaaagaccacaaatacccttaccaagctccccttgtggcattttattccaccaat
gagaatctacctctggcttgtcgtttacatatttctgagttcctttatggcaaggccttg
acatttgcagaaacttcagaacctgttgtatattctttgataaccctcttagaggaagaa
tcagaaatagtcaatttactgacaaatacccatcacaagtacagtgtccctcctgtgaac
tttctgccagtatcctctgggaccagaataaataatgctgtctgtcgtaaaccagtgatt
ccaagtaattcttttgcttcaaataaaattcctgaagttgaaaaagaatcagaacctgag
gaggagacagatgaggatgaaggtcctgcaccagttatagtggagaatgaaagctatgtg
aaccttaagaaaaagatttccaaaagatatgactggcaggcaaaatcagtacatgctgaa
aatgctaaaatctgcaagcagttccgaataaaacaggcctccagacagttccagtcaatt
ctgcaagaaagacaatcactccctgcttgggaagaaagagaaaccattcttaaattgttg
agtgagcaccaagtgcttgttataagtggtatgactggatgtgggaaaactacacagatt
cctcagtttattctggatgattctctgaatggaccacctgagaaagtggctaacatcatc
tgtacccaaccccgacgaatctcggcaatatctgttgctgaacgtgttgctaaagaaagg
acagaaagagtgggtctgactgtggggtaccagatccggctagaaagtgtcaagtcctca
gctaccagactgttatactgcaccacaggcgtgctgctgagaaggctggaaggagacata
gctctccaaggagtcacccatatcattgttgatgaagtccatgagaggacagaagaaagt
gacttcttgctgctagtcttgaaggacattgtgttgcagagaccaactcttcaagttatt
ctaatgagtgcaactttaaatgctgagctcttttcagaatatttcagttcctgcccagtt
attactataccaggtcgcacatttcctgttgatcagttttttctggaagatgcaattgct
gtgacaaggtatgtgttacaggatgggagcccatatatgcgctccatgaagcagatgaca
aaggagaagctgaaagcaaggcgcagcagaactgcatttgaagaagtagaggaagacctg
aggctctctcttcacctccagtcccaggattctgtcaaagatgcagtgccagatcaacag
ttagatttcaagcagctcctggcccgctataaaggggttagcaaatcggtcatcaaaaca
atgtccatcatggatttcgaaaaggtgaatcttgaattaatagaggccttgttagagtgg
attgtagatggaaagcactcctaccctccaggtgctatacttgtatttttaccgggacta
gcagaaatcaaaatgctatatgaacagctacaatctaattctcttttcaacaatagacgc
agtcatcgatgtgtggttcacccacttcattcatctttatccagtgaagagcagcaggcg
gtgtttgtaaaaccccctgtgggcgtaactaagattataatttccaccaacattgccgag
acatccataaccattgacgatgttgtctatgtcatcgattctgggaaaatgaaagagaag
agatatgacgccagcaaagggatggagagcctagaggatacttttgtctctcaagccaat
gctctgcagagaaagggtcgagcgggccgggttgcctctggggtctgcttccacttattc
accagccatcacttcaatcaccagctgttaaagcagcagctaccagagatccaaagagtg
ccgttggaacagctatgtctgagaattaaaattttagagatgtttagcactcacaatctt
cagtctgtgttctctcggctcattgagccgccacacactgactctctccgtgcctcaaaa
atacgattacgagacttaggagcgttaactccagatgaaaagctgacccctctagggtat
cacttggcctctctgcccgtggatgtgagaatcggcaaactgatgctgtttgggtctatc
ttccgctgtctggatcctgccctcaccattgctgccagtttggcttttaagtctcctttt
gtgtctccctgggataaaaaagaggaagctaaccagaaaaagctagaatttgcatttgca
aacagcgactatctggctcttctacgagcatataagggatggcagctaagtacgaaagaa
ggaatgcgtgcaagttataattactgcagacagaacttcttgtctggaagagttcttcag
gaaatggccagcctcaaacgacaattcactgaactgttatcagatataggctttgtaaag
gagggactcagagcaagggaaattgagaaaagggcccaaggaggagatggtatcttgggc
gccacaggagaagaggcaaactcaaatgctgagaaccccaagctgatatcagcaatgctg
tgcgctgctctttatccaaatgtagtgcaggtgaaaagcccagaagggaaatttcagaag
accagtaccggagctgtcagaatgcaacccaaatcagatgagttgaagtttgtcaccaag
aacgatggatatgtgcacattcacccttcctcagtgaactatcaggtcagacactttgac
agcccctacctggtgtaccacgaaaagatcaaaactagtcgggtgttcatccgagactgc
agtatggtgtccgtgtacccactggtcttgttcgggggaggccaagtgagtgtgcagctt
cagagaggggagtttgttgtgtccttggatgatggttggatccgttttgcagctgcttcc
catcaggtggctgaactagtaaaggaactccgctgcgaacttgaccagcttctccaggat
aagataaaaaacccaagcatagatctgtgtacatgtcctcgaggatcccggatcatcagc
atgattgtgaaacttgtcaccacacagtaa
DBGET
integrated database retrieval system
