Zalophus californianus (California sea lion): 113939511
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Entry
113939511 CDS
T07874
Symbol
CDRT1
Name
(RefSeq) CMT1A duplicated region transcript 1 protein isoform X1
KO
K10266
F-box and WD-40 domain protein 10
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zca04121
]
113939511 (CDRT1)
Ubiquitin system [BR:
zca04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113939511 (CDRT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_SPT8
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
F-box
F-box-like
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
113939511
NCBI-ProteinID:
XP_027481526
UniProt:
A0A6J2FNM4
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Position
16:complement(9543739..9591264)
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AA seq
1068 aa
AA seq
DB search
MENLDPRLRNAPYFRCEKGDSSVPVCQKCETCVLAWKIFSTKEWFRRVGEVPQRRFLVSI
LEQLDSFYLLHYFQNILQTTQGKDFIYSRSRINLSRKEGKIVRSSLNQILDKTVKQKMRE
ILYWFGRSTHRTKANYTLLLLQMCDPKLLLMAANVIRGLFLRQQNSVAGLDQDTSDVFFF
PEKDDNAQCETSDVFWAASTKNASFPSSRASEKEKSLENMGVEASNTEAQWESSIQCISE
MNRLFSRKADLSKAEYTPSDLLVDLDVVKDLSSGVSKYRDFIHYLPIHLSKYILSMLDKN
NLNRCASVSQHWAMLVQQVKMDLSMHTFIQSHITFLQGSYTKGIDPNYANRLFVPVPKIT
DNGKCMRVKNQKWKLRTKNDYNLWAAYQNQETQQVQMEERNVFCGTYNIRILSDTWDRNR
VVHYSGGDLVAVSSNRKIQLLDVIQVKELPIEFRGHAGSVRALFLCEEENFLLSGSYDLS
IRSWDLKSGACIRIFNGHQGTITCMDLYKNRLVSGARDCQVKEWDVETGKCLKTFKHKDP
ILATRINDTYIVSSCERGLVKVWHIVMAQLVKTLSGHEGAVKCLCFDQWHLLSGSTDGLV
MAWSMVGKYERCLMAYKHPKEVLHVALVFLRVISACADGKIRIYNFLSGNCLKVMKANGR
GDPVLSFFIQGNRMVINTESNILMFQFENIKWQYSLDQAKQKKKDKEEDWEENGLTEIPS
RSSIQAFSLRDSMSSKQTVAQESLLSKPYRSRVLLRAARVPTEVLLEGPPSQGRSKSPQR
DGKKRASPLSKEAKSLAGHTTNEDEEKLPPGDLIKHSKKKRWQIPMSADQFLLTVNALQQ
VHNSGEFAYPRRPQTQVIDAWGPSISHPRKVLSFKGKSIQQAVDRLRWSNPPIDVKQTSV
PLETQKLQPNLKNSLHSPRVQSTIPQPAIICPRFAVALKDEGQETGSINRTVRPCSPLTS
LQVIKPNRMLAPPVDRRTKSVKKERPRFYTTLDPFRMNTKFMLLTVKEEKEYGEAKMKEF
QARKPSEVVNPEKARRAAWIRKIKGLPIDHFMKQGKTAAPELGQNVFI
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctggacccgaggctcaggaatgccccctattttcgttgtgagaagggagac
agttctgtccccgtgtgccaaaagtgcgaaacatgtgtcttggcttggaagatcttctct
accaaagagtggttccggagggtcggagaggtgccccagaggaggtttctagtgagcatc
ctggagcagctggatagcttctatttgctgcactattttcagaatatccttcagaccacg
caggggaaggatttcatctacagccggtcccggatcaacctcagcaggaaggaggggaaa
atcgtcaggtcttccttgaaccagatattggataaaaccgtaaaacagaagatgagggag
attctgtactggtttgggagaagcacccaccggaccaaggcaaattacacgctcttgctg
ctgcagatgtgcgaccccaagctactgctcatggctgccaatgtcatcagaggtctgttt
ctgagacagcagaacagtgtcgcaggcctcgatcaagacactagtgatgtgtttttcttt
cctgagaaagacgacaatgcgcagtgtgagacctcagatgttttctgggcagctagcacc
aagaacgcatccttcccttcgtccagagcttcagaaaaagaaaagtcgcttgaaaacatg
ggagttgaggcatctaatactgaagcacaatgggagagttcgatccagtgtatttccgag
atgaataggctgttttccagaaaagcagacctgtcgaaggcggaatacaccccctccgat
ctgttggttgatttggatgtcgtcaaagacctgtcttccggggttagcaaataccgggac
ttcatccattacctgcccatccacctctccaaatatattctaagtatgctggataaaaac
aacctgaacaggtgtgcctccgtgagccagcactgggccatgctggtgcagcaggtcaag
atggatctgtcgatgcatactttcattcagagccatattaccttcttgcagggatcctac
acaaaaggaattgatcctaattatgccaacaggctttttgtcccggttcctaaaataacc
gataacgggaagtgcatgcgtgtgaaaaatcagaaatggaaactgagaacaaagaatgac
tacaacctgtgggccgcataccagaaccaggaaactcagcaggtccagatggaggagaga
aatgtcttctgtgggacttataatatccgcattctctctgacacgtgggatcgaaacaga
gtcgttcactattccgggggagatttggttgcagtgtcatccaaccggaagatccagctt
ctagatgtcatacaagtaaaggagttacccattgagttccgtggccatgctggcagtgtc
cgcgccctcttcttgtgtgaggaggagaactttctactaagcgggagttatgacctaagt
atcagatcctgggatctgaaaagtggggcttgtatacgaatcttcaatggccaccagggg
acaatcacttgcatggatttatataagaacaggctcgtatctggagcaagagattgccag
gtgaaagagtgggatgtagagacagggaagtgtctgaagacatttaaacacaaagacccc
atcttggccaccaggatcaatgacacctacatcgtgagcagctgtgagcggggcttagtc
aaagtgtggcacattgtcatggcccagttggtaaagactctcagcggccatgagggagcc
gtgaagtgtctgtgctttgaccagtggcatctcctctcaggaagtactgatggcctggtc
atggcctggagcatggtgggaaagtatgagaggtgcctcatggcctacaagcatccaaag
gaggtgctccacgtggctcttgtcttcctccgggtcatcagtgcctgtgcagatggcaag
atccgcatttacaatttcctcagtgggaactgtctgaaggtgatgaaagccaacggcaga
ggtgatcctgtgctgtccttctttattcagggcaacaggatggtgatcaacacggagagc
aatattctcatgttccagtttgagaatataaagtggcagtactccctggaccaggccaaa
caaaagaagaaggataaagaggaggactgggaagaaaatggcctcacagaaatcccctcc
aggtctagcattcaggctttcagcctgagggactcgatgtccagtaaacaaactgtggcc
caggagtccctgttaagtaaaccatacaggtcacgagttctcctgagggccgccagggta
cctacagaagtgttattagagggacctccaagtcaaggaaggtcaaaatcaccccaaaga
gatggcaagaagagagcgagtcctctttctaaggaagcaaaatccctcgcaggacataca
acgaacgaggatgaggagaaactaccacctggagacttgatcaagcactcaaagaaaaag
cgttggcaaatccctatgtcggcggaccagttccttctgacggttaatgccctgcagcaa
gtccataattcaggggagtttgcctatccccggaggccccaaacccaagtcattgatgcc
tggggaccttcaatttcacacccaaggaaggtcctgagtttcaaaggaaaatcaatccaa
caggcagttgataggttgaggtggagtaaccctcccattgacgtgaagcaaaccagtgtt
cccttggagacccagaaactgcagcccaacctgaagaactctttgcacagtccccgagtc
cagtccactataccccagcctgcgattatctgccccagattcgcagtcgccctcaaggat
gaaggccaagagaccggctccatcaacaggacagtgcgcccctgcagcccgttaaccagc
ctgcaggtaattaaaccgaaccgcatgctggctccacccgtggacaggagaaccaagtct
gtcaagaaagaacgacctcgcttctacacgacccttgatccctttagaatgaacaccaag
ttcatgttgttgaccgtaaaggaggagaaggagtatggggaagccaagatgaaggagttt
caggccagaaagcccagtgaagtggtcaatccagaaaaagcccgcagagctgcctggatc
aggaagatcaaaggcctgccgatagatcacttcatgaagcaaggaaaaacagcagccccg
gaacttggacaaaacgtgtttatctga
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