Zalophus californianus (California sea lion): 113939585
Help
Entry
113939585 CDS
T07874
Name
(RefSeq) ATP-binding cassette sub-family A member 8-like
KO
K05650
ATP-binding cassette, subfamily A (ABC1), member 8
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
113939585
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zca02000
]
113939585
Transporters [BR:
zca02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
113939585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
SMC_N
AAA_29
AAA_15
MMR_HSR1
AAA_22
AAA_25
AAA_16
ATP-synt_ab
AAA_23
URGCP_GTPase
Motif
Other DBs
NCBI-GeneID:
113939585
NCBI-ProteinID:
XP_027481713
UniProt:
A0A6J2FNU9
LinkDB
All DBs
Position
16:complement(51151484..51221403)
Genome browser
AA seq
1681 aa
AA seq
DB search
MSQKFQAPQVLAFCSDFNKRIRGKKSESSQLETVSCMQSKEFRKKTCGGILDKFQLKGKM
IKREISVCQQTWALLCKNLLKKWRMKRESLMEWLTALLLLLCLYLYPTNHKVNDFSSLPA
VDLGPVDSFKDSTFSIIYTPVTNSTQQIMSKVALASFMKDIKVLGLSSEENIKELMPNYP
EEVIQVIFTNTFSYHLKFLLGYRIPAKKEHRDHEAHCFKMSGGVNCQVSQYWERGFVALQ
AAINAAIIETATNHSVMEELMSVTGKNMKIHPFVSQGGIAADFFIFFCVISFSSFTYYAS
LNITRERKKMKGLMRMMGLQDSAFWLSWGLLYGVFIFIMALFLALIIKSVQFVILTGFMA
IFTIFFLYGLSLIALAFLMSVLVKKSFLTGLVMFLLTVFWGSLGFTALYRQLPTSLEWIL
SFLSPFAFMLGMAQLLRTDYDLNSSAFPNPSDYSNLIIATNFMLAFDLFFYVALTIYFEK
ILPNEYGHGYPPLFFLKSSFWSRQQKADHVVLEDEIDSNPSSNDSFEPMPPEFHGKEAIR
IRNVTKEYKGKPDKIEALKDLVFDIYEGQITAILGHSGTGKSTLLNILSGLSVPTKGSVT
IYNNKLSEMTDLENIIKLTGICPQSNVQFDFLTVKENLRLFAKIKGIQSHELAKEIQRIL
LALEMKNIQDVLAQNLSGGQKRKLSFATALLGDPQVFLLDEPTAGLDPFSRHQVWNLLKE
QRADRVILFSTQFMDEADILADRKVFLSNGRLKCAGSSLFLKKKWGIGYHLSLQLKEMHV
QENITSLIKQHIPDAKLSAESEGKLVYTLPLERTNRFPALYEDLDRRPGLGIENYGVSMT
TLNEVFLKLEGKSAVDEPDIATLGEAQAERTRDTERLVETEQVLSSLNEMTKTIGGLALW
RQQLCTVAWVRFLKLKHERKALLSLLLILGVGICPLLLKNIITKIYEKSYTWDLSPHLYF
LAPGQQSHDPLTQLLIINKTGTSIDDFIRSVEHQNIALEVDIFGTKNGLDDPSYNGAIIV
SGNTKNYRFSLACNSKRLNCFPVLMDIISNALLGMITPSAHIQTDRSTFLRDRRSNPYEF
QGYSMPWLILISSCTPYIAMSSIDDYKSKAQSLLWVSGLFPSAYWCGQALVDVPVYCLIF
LLMYLMDYGLNAQDTLFTVVNQIIQILCAVGYAASLIFLTYVISFIFHKGKRNSGIWSFC
FCMITIFSVFVLLFEHYGHVALYCVTFLVPHATLIGCMFLYFQVFIFYLQKEESRSTGLF
LVFLIPFLHFIIFLFILRCLEWKFGKKPMRKDPFFRIPPRSNDAYQNPEAPEGEDEDVQR
ERMRTADALNSTSFDEKPVVIFSCLRKEYAGKRKCCFSKRKKKIATRNVSFCVRKGEVLG
LLGHNGAGKSTSIKVITGDTKPTAGQVLLKGSSGEGSLGFLGYCPQENVLWPNLTVKEHL
EVFAAIKGLRKADAAITISRLVDALKLQDQLKLPVKALSEGIKRKVCFALSVLGNPSVML
LDEPSTGVDPEGQQQMWQVIRATFKDTERGALLTTHYMAEAEAVCDRVAIMVSGRLRCIG
SIQHLKSKFGKNYLLEMKVKTPEQRESLHREILRVFPQAARQERYSSVMVYKLPVENVRP
LAQAFCTLEKVKQSFHLEEYSLSQSTLEQVFLELSKEQELDDFDEELDPSVKRKLLPQED
P
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaaaatttcaagctcctcaagtgttagcattttgctctgactttaacaaacgt
ataagaggaaaaaaatcagagtcctcacaacttgaaactgtctcctgcatgcagagtaag
gaattcaggaagaaaacatgcggagggatccttgataaatttcaattgaagggcaaaatg
attaagagagaaataagtgtgtgtcaacagacatgggcattattatgcaagaaccttctg
aagaaatggagaatgaaaagagagtccttgatggaatggttgaccgcattgctcctccta
ctttgtttgtatctatatcctactaatcataaagttaatgatttctcttcactgcctgct
gtggacctgggaccggtagactcatttaaagattctacattttctattatatacacacct
gtcaccaattcaacccaacagataatgagtaaagtagccttagcttccttcatgaaagat
ataaaagttttggggctgtccagtgaagaaaatattaaagaattaatgccaaattatcct
gaggaagtaatacaagtcatcttcactaatacattctcatatcatttgaaattcttgctg
ggatacagaatcccagcaaaaaaggaacacagggaccatgaagctcattgttttaaaatg
agtggaggtgttaactgccaagtttcacaatactgggagagaggtttcgtcgctcttcaa
gctgctatcaatgctgctattatagaaactgcaacaaatcattcagtgatggaggaattg
atgtccgttactggaaaaaacatgaagatacatccctttgtcagtcaagggggcattgca
gctgatttcttcattttcttctgtgttatttccttttcctcattcacttattatgcatct
cttaacattacaagagagaggaaaaagatgaagggcttgatgaggatgatgggtcttcag
gattcagcattctggctctcctggggtctactctatggtgttttcatctttattatggca
cttttcttggcacttattataaaatctgtccagtttgtcattctgactggcttcatggcg
atcttcaccatctttttcctctatggattgtctttgatagctttggcttttctaatgagc
gtcttggtaaagaaatctttcctcactggtctggtcatgttccttctcaccgtcttttgg
ggaagtttgggatttacagcactgtacaggcaacttcctacatccttggagtggatttta
agctttcttagcccgtttgccttcatgcttggaatggcccagcttttgcgcacagactat
gatttgaattccagtgcatttcctaatccatcagactactcaaatctgataatagcaaca
aatttcatgttggcttttgatcttttcttctatgtggcattgacgatttattttgagaaa
attttgccaaatgaatatggacacggatatccccccttgtttttcctgaagtcctccttt
tggtcacggcaacagaaagctgatcatgtggtcctcgaagatgaaatcgattccaatcct
tcatctaatgactcctttgaaccaatgcctccagaattccatgggaaagaagccatcaga
atcagaaatgttacaaaagaatataaaggaaagcctgataaaatagaagcattgaaagat
ctggtatttgacatatatgaaggccaaatcactgcaatacttggtcacagtggaactgga
aaatcaacactgttaaacattcttagcgggctatctgttcccaccaaaggctcagtcacc
atttataacaataaactttcagaaatgactgacctagagaatatcatcaagctcactgga
atttgtccacaatccaatgtgcagtttgacttcctcactgtgaaagaaaatctcaggctc
tttgcgaaaataaaaggaattcagtcgcatgaactggccaaagagatacagagaattttg
ctggcattggagatgaaaaatattcaagacgtcttggctcaaaacttaagtggtggacag
aaaagaaaactcagctttgcaactgctcttttaggggatcctcaggttttcctattggat
gaaccaactgctggattggatcccttttcaaggcaccaggtttggaacctcctgaaggag
cagagagcagaccgtgtgatcctcttcagtacccagttcatggatgaggctgacatcctg
gctgataggaaagtgtttctctccaatgggaggctgaagtgtgcaggttcttctctgttc
ctaaagaagaaatggggcattggatatcacttaagtttgcagttgaaagaaatgcatgtt
caggaaaatataacatcacttattaaacagcacatccctgatgccaaattatcagcagaa
agtgaaggaaaacttgtctacacattgcccttagaaagaacaaatagatttccagcactt
tatgaggatctggatagacgtcctggcctggggattgagaattacggtgtttccatgaca
accttgaacgaagtgttcctgaaactggaaggaaaatcagctgtggatgaaccagatatt
gccacgttgggagaagcacaggcagaaagaaccagagacacagagaggcttgttgagacg
gaacaagttctcagttcactcaatgagatgacaaagacaatagggggcctggctctctgg
agacagcaactctgcacggttgcatgggttcgcttcttgaagttaaagcatgaaagaaaa
gctctcttatctctgctcttgattctaggagttggaatttgccctcttcttttgaagaat
atcatcactaaaatatatgaaaagagctacacttgggacctttctcctcatttatacttc
cttgctccaggacagcaatcacatgatcctctcactcagttattgatcatcaataaaaca
gggacaagcattgatgattttatacgttctgtggagcatcagaacatagctttggaagtg
gatatatttggaactaaaaatggcctggatgacccatcttataatggagccatcatagta
tctggtaatacaaagaattacagattttcattagcatgcaatagcaaaagactaaattgc
ttcccggttcttatggatattattagtaatgcgctacttggaatgattacaccatcagca
catatccaaactgacagaagtacatttttaagggacagaaggagtaatccatatgaattc
cagggatattccatgccctggttgattttgatatcctcatgtactccttatattgccatg
agcagcattgatgattataagagcaaagctcagtccctgctatgggtttcgggcctcttc
ccttctgcatactggtgtgggcaggcactggtggatgttccggtgtactgcttgatcttc
cttcttatgtatttgatggactacggtttaaatgcccaagacactctatttacagtggta
aatcagattatacaaatcctgtgtgcggttggctatgccgcctcccttatcttcttgaca
tatgtaatttcattcatttttcacaaggggaaaagaaatagtggcatttggtctttttgc
ttctgtatgatcaccatcttctctgtgtttgtattgctgtttgaacactatggacatgtc
gcactgtactgtgtcacctttttagtaccacacgccacgttaattggctgtatgttctta
tattttcaggtgttcatattttatctccagaaggaagaatccagaagtacagggctattt
ctggtattcttaattccgttcctgcattttatcatcttcctttttattcttcgatgtctg
gaatggaagtttggaaagaaaccaatgaggaaggatcccttctttagaattcctccaaga
agcaacgatgcttatcaaaatccagaagcaccagaaggggaggatgaagatgttcaacgg
gaaagaatgagaacagcagatgccttgaattccacaagctttgatgagaaaccggtcgtt
atcttcagctgcctgcgcaaagagtatgcagggaaaaggaaatgctgcttttccaagagg
aagaagaaaatcgccacaagaaatgtctctttctgtgttagaaaaggtgaggttttagga
ttattaggacacaatggagctgggaaaagcacatccatcaaggtgataaccggagacacg
aaaccaactgctggacaggtgctactaaaagggagcagcggggagggctccttgggcttc
ctggggtactgtccccaagagaacgtgctgtggcccaatctgactgtgaaggagcacctg
gaggtgtttgctgccatcaaaggactgaggaaagcggacgcagccatcaccatctcgagg
ttggtggatgcgctcaagctgcaggaccagctgaagctgcccgtgaaggccttatctgag
ggaataaagaggaaggtgtgcttcgcgctgagcgtcctgggaaacccatcggtgatgctt
ctggacgagccgtccacgggggtggaccccgagggacagcagcagatgtggcaggtgatc
cgggccaccttcaaagacacagagaggggcgccctcctgacgacccactacatggcagag
gctgaggccgtgtgtgaccgcgtggccatcatggtgtccggaaggctgagatgtatcggt
tccatccaacacctgaagagtaaatttggtaagaattatctgctggagatgaaggtgaag
acccccgagcagagggaaagcctccatcgtgaaattctgagggttttcccccaggctgcc
cggcaggaaaggtactcttctgtgatggtgtataaactgccagtggaaaatgtgcgacct
ttagcacaagctttctgcacattagaaaaggttaaacagagcttccacctggaggagtac
agcctctcccagtccaccctggagcaggttttcctggagctctccaaggaacaggagctg
gatgactttgatgaagaacttgatccttcagtgaagaggaaactcctcccacaggaagac
ccttaa
DBGET
integrated database retrieval system
