Zalophus californianus (California sea lion): 113939854
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Entry
113939854 CDS
T07874
Symbol
TMC8
Name
(RefSeq) transmembrane channel-like protein 8 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
113939854 (TMC8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zca02000
]
113939854 (TMC8)
03037 Cilium and associated proteins [BR:
zca03037
]
113939854 (TMC8)
Transporters [BR:
zca02000
]
Other transporters
Pores ion channels [TC:
1
]
113939854 (TMC8)
Cilium and associated proteins [BR:
zca03037
]
Other cilia and associated proteins
Stereociliary proteins
113939854 (TMC8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
WHD_DUF4423_like
DUF4658
Motif
Other DBs
NCBI-GeneID:
113939854
NCBI-ProteinID:
XP_027482317
UniProt:
A0A6J2FQJ8
LinkDB
All DBs
Position
16:58888011..58897886
Genome browser
AA seq
723 aa
AA seq
DB search
MLRQWSVQSSQALVEPEPEPGVEELWEQEMERLRSSQALVQELPYAMVDKRLIRQLREPE
GVKTSCWQRWRSRRQTAARRLGEAAQRLARGFGLWEGALYEIGGLFGTGIQSYFTFLRFL
LLLNLLTLLLTAGFVLLPLVWLRPPDTGPSLNFTLQCPGSLQPRTGVPRFHNRLWNVLTG
RAFTNTYLFYGAYRAGPESSSSYSIRLAYLLSPLACLLLCFFGILRRMVKGLPQRLFLGQ
DYKSPVSVKVFSSWDFCIQGQEAATIKKHEISNEFKVELEERRRLLLVQQETRTQRACHL
LTYLRVNVLIGLLVVGAISAIFWATKYSQDNKEESLFVLLQYLPPGVIALVNFLGPLLFV
FLIQLENYPPNTEVNLALIWCVVLKLASLGMFSFSLGQTVLCLGRNKTSCVSYGYNACDY
QCWENAVGEELYKLSIFNFLLTVAFAFFVSLPRRLLVERFSGPFWAWLDREEFLVPKNVL
DIVAGQTITWMGLFYCPLLPLLNSVFIFLTFYIKKYTLLRNSKASPRRFRASSSTFFFQL
VLILGLLLAVTPLGYVVSSIHSSWDCGLFTNYSAPWQVVPELVALRLPPPGQRVLHYLGS
HAFSFPFLILLSLVLTVCVSQSQANARAIQGLRKQLVWQVQEKWHLVEDLSRLLPAPGSG
GSVGPESPHSRASRPRSFCPGFPCPGSPGPRAPRPEPCLEDPARPGGAPVPAPRFRFPSG
SEL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggcagtggtcagtgcagtccagccaggccctcgtggagccagaacccgagcca
ggggtcgaggagctatgggagcaggagatggagcggctgcggtcctcccaggcactcgtg
caggagttgccctatgccatggtggacaagcgcctcatccggcagctgcgggagcccgag
ggggtgaagacctcttgctggcagcgatggcggagcaggcggcagactgcggcacggcgc
ctaggggaggcggcacagcggctggcccggggctttgggctctgggaaggggctctctac
gagatcgggggcctctttggcaccggaatccagtcctacttcaccttccttcgcttcctg
ctgttgctcaaccttctgaccctgcttctcactgccggcttcgtcctgctgcccctggtc
tggctccgcccccccgacacgggcccctcccttaacttcacccttcagtgccctggtagc
ctccagccccggactggtgttcccagattccacaatcgactttggaatgttttaaccggc
agggccttcaccaacacctacctcttctatggcgcctaccgggcagggcccgagagcagc
tcgtcgtacagcatccgcctggcctacctcctgagccccctggcctgcctgctgctctgc
ttctttgggattctgcggcggatggtgaaggggctgccacagaggctgttcctgggccaa
gactacaagtcgcccgtgagcgtcaaagtgttctcctcctgggacttctgtatccaggga
caggaagcagccaccatcaagaagcatgagatcagcaacgagttcaaggtggagctggag
gaaaggcgtcggctcctgctggtgcagcaggagacccggacccagagggcctgccacctg
ctcacctacctgcgggtcaatgtcctcatcgggctcctggtggttggagccatcagcgcc
atcttctgggccaccaagtactcgcaggacaacaaagaggagtccctgtttgtgctgctc
cagtacctgccccctggggtcatcgccctggtcaactttctggggcccctgctctttgtt
ttcctcatccagctggagaactaccctcccaacacggaggtcaacctcgccctcatctgg
tgcgtcgtgctgaagctggccagcctgggaatgttctccttctctctgggccagaccgtg
ctgtgccttggcagaaacaagaccagctgtgtgtcctacggctacaacgcctgtgattac
cagtgctgggagaacgcggtcggagaagagctgtacaagctgagcatcttcaacttcctt
ctcacggtggcctttgccttctttgtcagcctgcctaggaggctgctggtggagcgcttc
tcgggcccattctgggcctggctggaccgggaagaattcctggtgcccaagaatgtcctg
gacatcgtggcggggcagaccatcacctggatgggcctcttctactgccccctgctgccc
ctgctcaacagcgtcttcatcttcctcaccttctacatcaagaagtacaccctcctgagg
aactctaaggcctctcctcggcgattccgcgcctccagctccaccttcttcttccagctg
gtgctcatcctgggcctgctcctggccgtcacgcccctgggctatgtggtcagcagcatc
cactcctcctgggactgtggcctcttcaccaactactcggccccctggcaggtggtccca
gagctggtggccctccggctcccgccccctggccagcgcgtcctccactacctcggctcc
cacgccttcagcttccccttcctcatcctgctcagccttgtcctcacggtttgcgtctcc
cagtcccaagccaatgcgagggccatccaggggctccggaagcagctggtgtggcaagtc
caggagaagtggcacctggtggaggacctgtcgcggctgctaccggcgccgggctccggc
ggttctgtggggcccgagtctcctcactccagagcttcgcgcccgcggtccttctgccct
ggattcccgtgcccgggctccccgggccccagggcccccaggccggaaccttgcctcgag
gatcccgccaggccaggcggtgccccggtccccgcccctagattccgcttccccagcggc
tcagagctgtag
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