Zalophus californianus (California sea lion): 118356607
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Entry
118356607 CDS
T07874
Name
(RefSeq) LOW QUALITY PROTEIN: probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zca01002
]
118356607
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zca04121
]
118356607
Enzymes [BR:
zca01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118356607
Peptidases and inhibitors [BR:
zca01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118356607
Ubiquitin system [BR:
zca04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118356607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
118356607
NCBI-ProteinID:
XP_035581751
UniProt:
A0A6P9F8M0
LinkDB
All DBs
Position
Y:complement(327841..478063)
Genome browser
AA seq
2553 aa
AA seq
DB search
MTATTRGSPIGGNDIQGQAPDGQSQPSFQQNQTSSADSSTENSPATHPDEQGQGDAPPQH
EDEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFF
RDGLTVSFTKILMDEAVSGWKFEIHRCIINNTHRLMELCVAKLSQDWFPLLDLLAMALNP
HCKFHIYNGTRPCESVSTNAQLPEDELFARSSDPRSPKGWLVDLINKFGTLNGFQILHDR
FISGSPLNVQVIAALTKPFGQCYEFLSQHTVRKYFLPVIQIVPQFLENLTDEELKKEAKN
ETKNDALSMIIKSLKNLASRIPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEINK
VISSVSYYTHRHGNPEEEEWLTADRMAEWIQQNNILSIVLXGSFHQPQYVEKLEKILRFV
IKEKPLTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSC
SQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRH
DLINQLQHNHALVTLVAENLATYMNIVRLYARDHEDYDPQTVRLGSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFF
ESNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLWRVVIQ
SNDDIANRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCVLDGDEDSI
NCARQEAIRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHLSLIVRFPNHGRQVE
DLDIWSHTNDTVGSVRRCILNRIKANVAHTKIELFVGGELIDSEDDRKLIGQLNLKDKSV
ITAKLTQVSSNMPSSPDSSSDSSTGSPGNHCNHYSDGPNPEVESCLPGVIMSLHPRYIAF
LWQIADLGSNLNMPPLRDGARILMKLMPPDSTTVEKLRAICLDHAKLGENNLGPSLESLF
FGPSASRVLYLTEVVYALLMPASAPLADDSSDFQFHFLKSGGLPLVLSMLTRNNFLPNTD
TETRRGAYFNGLKIAKLLLTAIGYGHVRAVAEACQPVVEGADPITPINQVTHDQAVVLQN
ALQIIPNPSSECMLRNVSIRLAQQISDEASRHMPDTCVIRAIQKIIWASGCGALDLVFSP
NEKITKIYEMTPSASSEPDMEDEQVCCEALEVMTLCFALIPTALDALSKEKAWQTFIIDL
LLHCPSKTVRQLAQEQFFLMCTRCCMGHRPLLFFITLLFTILGSTARERGKHSGDYFTLL
RHLLNYAYNSNINVPNAEVLLNNEIDWLKRIRDNVKNTGETGVEEPILEGHLGVTKELLA
FQTPEKKYHIGCEKGGANLIKELIDDFIFPASKVYLKCMRNGELPAEQAIPVCSSPATIN
AGFELLVALAVGCVRNLKQIVDCLTEMYYMGTAITTCEALTEWEYLPPVGPRPSKGFVGL
KNAGATCYMNSVIQQLYMIPSIRNSILAVEGTGSDVDDDMFGDEKQDSESNVDPRDDVFG
YPHQFEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVN
LREQHDALEFFNSLVDSLDEALKALGHPAILSQVLGGSFADQKICQGCPHRYECEESFTT
LNVDIRNHQNLLDSLEQYIKGDLLEGANAYRCEKCDKKVDTVKRLLIKKLPPVLAIQLKR
FDYDWERECAIKFNDYFEFPRELDMEPYTVPGVAKLEGNNVNPHSQLIEQNEQSESETTG
STKYRLVGVLVHSGQASGGHYYSYIIQRNGKDGERNRWYKFDDGDVTECKMDDDEEMKNQ
CFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTVDQDDQMIRYISELTITRPHQ
IMSPAIERSVRKQNVQFMHNRMQYSLEYFQFVKKLLTCNGIYLSPAQGQDHLLPEAEEIT
MISIQLAARFLFTTGFHTKKIVRGPASDWYDALCLLLRHSKNVRFWFAHNVLFNVSNRFS
EYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSSFTSPGLSGQACDNLSLSDHLLRAVL
NLLRREVSEHGRHLQQYFNLFVMYANLGMAEKTQLLKLSVPATFMLVSLDEGPGPPIKYQ
YAELGKLYSVVSQLIRCCNVSSRMQSSINGNPPLPNPFGDPNLSQPIMPVQQNVADILFV
RTSYVKKIIEDCSNSEETLKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLL
QILLIEDSWQTHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSNCPVA
YQILQGNGDLKRKWTWAVEWLGDELERRPYTGNPPYAYNNWSPPVQSNETSNGYFLERSH
SARMTLAKACEICPEEEPDDQDAPDEHELSLPEDTPLYPHSSGSHCQQNNHVHGQPYTGP
AAQHLNNHQKTGQHAQENFEGNEEVSSSQMKDQ
NT seq
7662 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacaactcgtggctctccaataggagggaatgacatccaaggccaggctcct
gatggacagtctcagccctccttccaacagaaccagacctcatcagctgactcgtccact
gagaattccccagcaactcacccagatgaacaaggtcaaggtgatgctccaccacagcac
gaagatgaagaacctgcatttccacatactgacttggcaaagttggatgacatgatcaat
aggcctcgttgggtggttccagttttgccaaaaggggaattagaagtgcttttagaagct
gctattgatcttagtaaaaaaggtcttgatgttaaaagtgaagcatgtcagcgttttttt
cgagatgggttaacagtatctttcactaaaattcttatggatgaggcagtgagtggctgg
aaatttgaaattcataggtgtattattaacaatactcatcgtctaatggagctttgtgtg
gccaagttgtcccaagactggtttccacttctagatcttcttgctatggccttaaatcca
cattgcaaattccacatctacaatggtacacgtccatgtgaatcagtttcgacaaatgct
caattgcctgaagatgaactatttgctcgttcttcagatcctcgatcaccaaaaggttgg
ctagtggatctcatcaataaatttggcacattgaatgggttccagattttgcatgatcgt
tttattagtggatcacctttgaatgttcaagtaattgcagcccttactaaaccatttgga
caatgctatgagtttctcagtcaacatacagtgagaaaatactttcttccagttatacaa
atagttcctcagtttttagaaaatttaactgatgaagaactaaaaaaagaagcaaagaat
gaaacaaaaaatgatgccctttcgatgattattaaatctctgaagaatttggcttccaga
attccaggacaagaagaaactgtaaaaaatttagaaatttttaggttgaaaatgatactc
agattgttgcaaatttcttcttttaatggaaagatgaatgcactgaatgaaattaacaaa
gtgatatctagtgtatcatattatactcatcggcatggtaatcctgaggaggaagagtgg
ctgacagctgatcgaatggcagaatggatacaacagaacaatatcttatccatagtgctg
tgaggtagttttcatcaacctcagtatgtggaaaagctagagaagattcttcgttttgtg
attaaagaaaaacctcttacattacaggatcttgataacatctgggcagcacaggcaggg
aaacatgaagccattgtgaagaatgtacatgatctgctggcaaagttggcttgggatttt
tctcctgaacaacttgatcatctttttgattgctttaaggcaagttggacaaatgcaagt
aaaaagcaacgtgaaaagctactggagctgattcgtcgtcttgcagaagatgataaagat
ggtgtgatggcacacaaagttttgaacctgctttggaatctggcccatagtgatgatgtg
cctgtagacatcatggacttagctctcagtgcccacataaaaatactagattacagttgt
tcccaggatcgagacacacagaagatccagtggatagatcgctttatagaagaacttcgt
acaaatgacaagtgggtgattcctgcactgaaacaaataagagaaatttgtagtttgttt
ggtgaagcacctcaaaatttgagtcaaactcagcgaagtccccatgtattttatcgtcat
gatttaatcaaccaacttcagcacaatcatgccttagttactttggtagcagaaaacctt
gcaacttacatgaatattgttcgactgtatgctagagaccatgaagactatgacccacaa
actgtgaggcttggaagtagatacagtcatgttcaagaagtccaagaacggcttaacttc
cttagatttttattgaaggatggccaactgtggctctgtgctcctcaggcaaaacaaatc
tggaaatgcttagcagagaatgcagtttacctttgtgatcgtgaagcctgttttaagtgg
tattccaagttaatgggtgatgaaccagacttagatcctgatattaataaggacttcttt
gaaagtaatgtgcttcagcttgatccctccctgttaactgaaaatggaatgaaatgtttt
gaacgattcttcaaagcagttaattgtcgtgaagggaaactagtagcaaaaagaagagcc
tatatgatggatgatttggaactaataggattagactacctttggagggttgtgattcag
agtaatgatgacattgccaacagagctatagatctccttaaagagatatatacaaacctt
ggccccaggttacaggtcaatcaggtggttatccatgaagacttcatccaatcttgcttt
gatcgtttgaaagcctcatatgatacattatgtgttttggatggtgatgaagacagtatt
aattgtgcaagacaggaagccattcgaatggttcgagtattaactgttttaagggaatac
ataaatgaatgtgacagcgattatcatgaggaaagaacaattctacctatgtcaagagca
ttccgtggtaaacacctctctcttatagttcgatttccaaaccatggcagacaggttgag
gacttggacatatggtctcatacaaatgatacagttggttcagtacgacgatgtattctc
aaccgtattaaagcaaatgtagcccatacaaaaattgaactcttcgtgggtggtgagcta
atagattctgaagatgacagaaaactaataggacaattaaacttaaaagataaatcagtg
attacagctaaacttacccaagtaagttccaatatgccatcaagccccgatagttcttct
gattcttcaactggatcacctggcaaccattgtaatcactacagtgatggtcccaatcca
gaagtggaaagttgtttgcctggagtgataatgtcactgcatcccagatacatagctttc
ctttggcaaattgcagacttaggtagcaatctgaatatgccacctcttagggatggagca
agaatacttatgaaacttatgcccccagatagcacaacagtagaaaaattaagagccatt
tgtttggatcatgcaaaacttggagaaaataaccttggaccatctcttgaatcacttttc
tttggtccttctgcctcccgagtgctatacctaacagaggtcgtttatgccttgttaatg
cctgctagtgcacctttggcagatgattcctctgactttcaatttcacttcttgaaaagt
ggtggcttacctcttgtactgagtatgttaacaagaaataacttcctgccaaatacagat
acagaaactcgaaggggtgcttacttcaatggtcttaagatagccaaactgttgttaact
gccataggctatggccatgttcgagctgtagcagaagcttgtcagccagttgtagaaggt
gcagatcccataacaccgattaatcaagttacgcatgatcaagcagtggtgctacaaaat
gcccttcagattattcctaatccatcatctgagtgcatgcttagaaatgtatccatacgt
cttgcccagcaaatatctgatgaggcttcaagacacatgcctgatacttgtgtaattaga
gctatacaaaaaatcatctgggcatcaggatgtggggcattagatttggtatttagccca
aatgaaaaaatcacaaaaatttatgagatgacccccagtgcaagcagtgagccagacatg
gaggatgaacaggtttgctgtgaagcattggaagtgatgacattatgttttgctctgatt
ccaacagccctggatgcacttagtaaagaaaaagcctggcagacatttatcattgactta
ttattgcactgtcccagcaaaactgttcgtcagttggcacaggagcaattttttttaatg
tgcacaagatgttgcatgggacacaggcctctacttttcttcattactctgctctttacc
attttggggagcacagcaagagagagaggtaaacattcaggtgactatttcactcttcta
cggcaccttcttaattacgcttacaacagcaatatcaacgtacccaatgctgaagttctt
ctaaataatgaaatagattggctcaaaaggattagggataacgttaaaaacacaggtgaa
acaggtgttgaagagccaatcttggaaggtcaccttggggtaacaaaagagttactagcc
tttcaaacacctgagaaaaagtatcatattggttgtgaaaaaggaggtgctaatctcatt
aaagaattaattgatgatttcatctttcctgcttccaaagtttacttgaaatgtatgaga
aatggagaactgccagctgagcaggctatcccagtctgtagttcacctgctaccatcaat
gctggttttgaactacttgtagccttagctgttggttgtgtaaggaacctcaaacagata
gtagactgtttgactgaaatgtattacatgggcacagcaataactacttgtgaagctctt
actgaatgggagtatctaccacctgttggaccccgcccatcaaaaggatttgtgggactc
aaaaacgctggtgctacttgttatatgaactctgtgatccaacagctgtacatgattcct
tccatcagaaacagtattcttgctgttgaaggcacaggtagtgatgtagatgatgatatg
ttcggtgatgagaagcaggacagtgagagtaatgttgatccccgagatgatgtatttgga
tatcctcatcaatttgaagacaaaccagctttgagtaagacagaagataggaaagaatac
aatattggtgtcctaagacatcttcaggtcatctttggtcatttagctgcttcccgacta
caatactatgtgcccagaggattttggaaacagttcaggctttggggtgaacctgttaat
cttcgggaacaacatgatgccttagagttttttaattctttggtggatagtttagatgaa
gctttaaaagctttaggacatccagctatactaagtcaagtcctgggaggttcctttgct
gatcagaagatttgccaaggctgcccccatagatacgagtgtgaagaatcttttacaact
ctgaatgtagatattagaaatcaccaaaaccttcttgattctttggaacagtatatcaag
ggagatttattggaaggtgcaaatgcatatcgatgtgaaaaatgtgataaaaaggttgat
acagtaaagcgcttgctaattaaaaagttgcctcctgttcttgctatccaattgaaacga
tttgactatgactgggaaagagaatgtgcaattaaattcaatgattattttgaatttcca
cgagagctggacatggaaccttacacagtaccaggtgttgcaaaactggaaggaaataat
gtaaacccacacagtcagttgatagaacagaatgagcagtctgaaagtgagacaacagga
agcacaaaatacagacttgtgggtgtgcttgtacacagtggtcaagcaagtggaggacat
tattattcttacatcattcaaaggaatggtaaagatggtgagagaaatcgctggtataaa
tttgatgatggagatgtaacagaatgtaaaatggatgatgatgaagaaatgaaaaatcag
tgttttggtggagagtacatgggagaagtatttgatcatatgatgaagcggatgtcgtac
aggcggcaaaaaagatggtggaatgcttatatacttttttatgaacgaatggacacagta
gaccaagatgatcagatgataagatatatatcagagcttactatcacaagaccccatcaa
attatgtcaccagccattgagaggagtgttcgaaaacaaaatgtgcaattcatgcataac
cgaatgcagtacagtttagaatattttcagtttgtaaaaaaactgcttacatgtaatggt
atttatctaagccctgctcaaggacaagatcacttgttgcctgaagcagaagaaatcact
atgattagtattcaacttgcagctagattcctctttaccactggatttcacacgaagaaa
attgtccgtggccctgccagtgattggtatgatgcactgtgccttcttctccgtcatagc
aaaaatgtgcgtttttggtttgctcataatgttctttttaatgtttcaaatcgcttctct
gaatatctcctcgagtgccctagtgcagaagtgaggggtgcatttgcaaaacttatagta
tttattgcacatttttctttgcaagatgggccttgtccttcatcatttacatctcctgga
ctttctggtcaggcatgtgataacttaagcttgagtgatcacttactaagagcagtatta
aatctcctcagaagggaagtttcagagcatggccgtcatttacagcaatatttcaatctg
tttgtaatgtatgctaatttaggtatggcagaaaagacacagcttctaaaattgagtgta
cctgctacatttatgctagtgtctttagatgaaggaccaggtcctccaatcaaataccag
tatgctgaattgggcaagttatattcagtagtgtctcagctgatccgctgttgcaatgtc
tcatcaagaatgcagtcttcaatcaacggtaatccccctcttcccaatccttttggtgat
cccaatttatcacagcctataatgccagttcagcagaatgtggcagacattttgtttgtg
agaacaagttatgtgaagaaaattattgaagactgcagtaactcagaggaaaccctcaaa
ttgcttcgtttttgctgctgggagaatcctcagttctcatctactgtcctcagtgaactt
ctctggcaggttgcatattcatacacctatgaacttcggccatatttggatttacttttg
cagattttacttattgaagattcttggcagactcacagaattcataatgcacttaaagga
atcccagatgatcgagatggtttgtttgatacaatccaacgctctaagaatcactatcaa
aaaagagcataccagtgtataaaatgtatggtagcactctttagcaattgtcctgttgct
taccagatattacagggtaatggagatcttaaaagaaagtggacctgggcagtggaatgg
cttggagatgaacttgaaagaagaccttatactggcaatcctccatatgcttacaataat
tggtctcctccagtgcaaagcaatgaaacatcaaatggttatttcttagagagatcacat
agtgcaaggatgactcttgcaaaagcttgtgaaatctgtccagaggaggagccagatgac
caggatgccccagatgagcatgagttatctctaccagaagataccccattgtatcctcat
tcatctggatctcactgtcaacagaataatcatgtgcatggacagccatatacagggcca
gcagcacaacacttgaacaaccatcaaaaaactggccaacatgcacaagaaaactttgaa
ggcaatgaagaagtatcctcatctcaaatgaaggatcagtga
DBGET
integrated database retrieval system
