Zalophus californianus (California sea lion): 118356727
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Entry
118356727 CDS
T07874
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03040
Spliceosome
zca05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118356727
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
118356727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zca03019
]
118356727
03041 Spliceosome [BR:
zca03041
]
118356727
Messenger RNA biogenesis [BR:
zca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118356727
mRNA cycle factors
Common to processing body (P body) and stress granule
118356727
Spliceosome [BR:
zca03041
]
Common components
Common spliceosomal components
hnRNP proteins
118356727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
118356727
NCBI-ProteinID:
XP_035582126
UniProt:
A0A6P9F9S8
LinkDB
All DBs
Position
1:6360854..6361975
Genome browser
AA seq
373 aa
AA seq
DB search
MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHSEQWGTLTDCVVMRDPNTKRSRGFGFV
TYATVEEVDAAMNARPHKVDGRAVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHH
LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVREA
LSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNSGRGGNFRGRGGFGGGXGGGGFGAS
GDGHNGFGNDGGYGGGGAGYSGGSRGYGSGGQGYGNQGSGCGGSGSCDSYNNGGGGGGCG
GGSGSNFGGGGSSNDFGSYNNQPSNSGPMEGGNFGGRSSGPXGGGGQYFAKPRNQGGCGG
SSSSSSYGSGRRF
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagtcagagtctcccaaagagcctgaacagctgcggaagctcttcatcggaggt
ttgagctttgaaacaaccgatgagagtctgaggagccattctgagcaatggggaacgctt
acggactgtgtggtaatgagagatccaaacaccaagcgctccagaggctttgggtttgtc
acgtatgccactgtggaggaggtggatgcagccatgaacgcaaggccacacaaggtggat
ggaagagctgtggaaccaaagagggctgtctcaagagaagattctcaaagacctggtgcc
cacttgactgtgaaaaagatttttgttggtggcattaaggaagacactgaagaacatcac
ctaagagattattttgaacagtatgggaaaattgaagtgatcgagatcatgactgaccga
ggcagtggcaaaaagagaggttttgcttttgtaacatttgatgaccatgactctgtagac
aagattgtcattcaaaaataccatactgtgaatggccacaactgtgaagtaagggaagcc
ctatctaagcaagagatggctagtgcttcatccagccaaagaggtcgaagtggttctgga
aactttgggggtggtcgtggaggtggttttggtgggaatgacaactctggtcgtggaggg
aacttccgtggtcgaggtggctttggtggcggttgaggtggtggtggatttggtgccagt
ggggatggccataacggatttggtaatgatggtggttatggaggaggcggcgctggttac
tctggaggaagcagaggctacggaagtggtggacagggttatggaaaccagggcagtggc
tgcggcgggagtggcagctgtgacagctataacaacggaggaggcggaggcggctgtggc
ggtggtagtggaagcaactttggaggtggcggaagctctaatgattttggcagttacaac
aatcaaccctcaaattctggacccatggaaggaggaaattttggaggcagaagctctggc
ccctagggtggtggaggccaatactttgccaaaccacgaaaccaaggtggctgtggtggt
tccagcagcagcagtagctacggcagtggcagaaggttttaa
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