Zalophus californianus (California sea lion): 118356957
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Entry
118356957 CDS
T07874
Name
(RefSeq) protocadherin beta-6
KO
K16494
protocadherin beta
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zca04515
]
118356957
Cell adhesion molecules [BR:
zca04515
]
Cadherins
Protocadherins
118356957
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
118356957
NCBI-ProteinID:
XP_035583384
UniProt:
A0A6P9FBH5
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Position
5:33848018..33851836
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AA seq
811 aa
AA seq
DB search
MMGTGKRFFPLGSDIMEMARTKVHRKKRQVAILIIWVLLWEAGSESIQYSVLEESETGTF
VANLTKDLGLRRGELAARGAQVVFKGNRQHLQLDPKTYDLLLNEKLDREELCGSTEPCVL
PFQVLLENPLQFFQAALRVRDINDHAPEFPAREMLLKISEITTPGKLFPLKMAQDLDAGN
NSLQSYIISSNPHFHVLTRNRSDGRKFPELVLDKALDREEQQELRLTLTAVDGGSPPRSG
TTEIQILVLDINDNAPEFAQELYEAQIPENNSLGSLIITVSATDLDAGSFGEVSYALFQG
DDINQPFEINVITGEIRLRKTLDFEEFQSYHVDIEATDGGGLSGKCSLIIKVLDVNDNTP
QLTMSSLISPFPENLPEVIVAIFSVSDADSGQNQQVICSIDENLPFLLRPSVENFYTLVT
EGALDRESQAEYNITITVTDLGTPRLKTQHNITVTVSDVNDNAPAFSQAAYTLRVRENNS
PALHIGSVSATDRDSGANAQVTYSLLPPQDPQLPLASLVSINADNGQLFALRSLDFEALR
AFEFRVGAADRGSPALSSQALVRVLVVDDNDNSPFVLYPLQNGSAPCTELVPRAAEAGYL
VTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHSGEVRTARLLSERDAVKHRLVVLVK
DNGEPPLSASVTLHVLLVDGFSQPYLPLPDAAAAEARADPLTVYLVVALASVSSLFLFSV
LVFVAVRLCRRSRAASGGGCSVPEGPFPGHLVDVSGAGTLSHSYQYEVCLRRGSGTSEFK
FLKPIIPNFPPQGTGKEMEENPTVRDSFLFS
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgatggggactggaaaaagattttttcctctgggatcagacataatggagatggcgaga
acaaaagtacatcgcaagaaaaggcaagtggcaattctcattatatgggtgcttttgtgg
gaagccggttcagaatcgattcaatattctgtactggaggagtcagaaactggcacgttt
gtggccaatttgacaaaggacctgggactcaggagaggagaactggctgcgcggggtgcc
caggttgttttcaaggggaacagacagcatttgcagcttgacccaaagacctatgattta
ctgctaaatgagaaactggaccgggaagagctgtgcggctccactgagccatgcgtgcta
ccttttcaagtgttactggaaaatcccttgcagttttttcaggctgctttacgagtcaga
gatataaatgaccacgccccagagttcccagccagagaaatgctactaaaaatatcagaa
attactacaccaggaaagctatttcctttgaaaatggcacaggatttagatgctggtaac
aacagtcttcagagctacataatcagctccaatcctcattttcacgttctcactcgcaat
cgcagcgatggcaggaagttcccggagctggtgctggacaaagccttggaccgcgaggag
cagcaggagctaaggcttaccctcacagcggtggatggtgggtctccgcccaggtctggg
accacggagattcagatcctggtcttggacatcaatgacaatgctcccgaatttgctcag
gaactctatgaggcacaaattcctgaaaacaattccctgggctccctgattatcaccgtc
tcagcgacagatttagatgcaggatcctttggggaggtatcttatgccctatttcaggga
gatgacattaaccaacccttcgaaataaacgtaattacaggagaaattcgactgagaaag
actttggattttgaggaatttcaatcatatcacgtggatattgaggctacagatggcggg
ggactatcaggaaaatgctctttaatcatcaaggttctggacgtaaatgacaacactcct
caactgaccatgtcctcactcatcagtcccttccctgaaaacctgccagaggtcatagta
gcaattttcagtgtgtcagatgcagattctggacaaaatcaacaggttatttgttctata
gatgaaaatctcccctttcttctaagaccatcagtcgagaatttctacaccttggtaacc
gaaggagcgctggatagagagagccaggccgagtacaacatcaccatcaccgtcaccgac
ctggggacccccaggctgaaaacccagcacaacataacggtgacggtctccgacgtcaac
gacaacgccccggccttcagccaagccgcctacaccctgcgggtgcgcgagaacaacagc
cccgccctgcacatcggcagcgtgagcgccacggacagagactcgggcgccaacgcgcag
gtcacctactcgctgctgccgccccaggacccgcagctgccgctggcctcgctggtgtcc
atcaacgcggacaacgggcagctgttcgcgctcaggtccctggatttcgaggcgctgcgg
gcgttcgagttccgcgtgggcgcggccgaccgcggctcgccggcgctcagcagccaggcg
ctggtgcgcgtgctggtggtggacgacaacgacaactcgcccttcgtgctgtacccgctg
cagaacggctccgcgccctgcaccgagctggtgcccagggcggccgaggcgggctacctg
gtgaccaaggtggtggcggtggacggcgactcgggccagaacgcctggctgtcgtaccag
ctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcacagcggcgaggtgcgc
acggccaggctgctgagcgagcgcgacgccgtcaagcacaggctggtggtgctggtcaag
gacaatggcgagccgccgctgtcggccagcgtcacgctgcacgtgctgctggtggacggc
ttctcgcagccctacctgccgctcccggacgcggcggcggccgaggcccgcgccgacccg
ctcaccgtctacctggtggtcgccttggcgtcggtgtcgtcgctcttcctgttctcggtg
ctggtgttcgtggcggtgcggctgtgcaggaggagccgggcggcgtcggggggcggctgc
tcggtgcccgagggcccctttccgggccacctggtggacgtcagcggcgcggggaccctg
tcccatagctaccagtacgaggtgtgtctgaggcgaggatctgggaccagcgagttcaag
ttcctcaagcccattattcccaacttccctcctcagggcactggaaaggaaatggaggaa
aaccccacggttcgtgatagtttcctattcagttaa
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