Zalophus californianus (California sea lion): 118356958
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Entry
118356958 CDS
T07874
Name
(RefSeq) protocadherin beta-17-like
KO
K16494
protocadherin beta
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zca04515
]
118356958
Cell adhesion molecules [BR:
zca04515
]
Cadherins
Protocadherins
118356958
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
EndoS_Ig-like
Motif
Other DBs
NCBI-GeneID:
118356958
NCBI-ProteinID:
XP_035583387
UniProt:
A0A6P9FL92
LinkDB
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Position
5:33853022..33858759
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AA seq
799 aa
AA seq
DB search
METTLPKAQQKRQVTAIIILIMLIRWEVGSTTIKYSVLEERESGSFVANLAKDLGLGLGE
LAARGARILSKGNQQYLQLEQKSGNLLLKEKLDREELCGDTDPCILHFQVLLKSPVQFIK
GELQLRDINDHAPKFLENEILLKISESSRPGTAFPLKIAQDLDVGSNTVQNYTIGNNSHF
HLFTRNHSDGRRYPELVLDKALDREEESELRLTLMAMDGGSPPRTGTSQVLIVVLDINDN
APEFAQLLYEVQIPENSPIGSLVITVTARDLDAGTLGELSYSFFQSSNQVIQAFEINSVT
GEIRLKKMLDFEEIQSYRMEIEASDGGGLSGKCSIAIEVMDVNDNTPELTMSVFTSDIPE
NTPDTVVAIFGISDPDSGENGKMMCSIQDHLPFLLKLTVENFYTLVTEGALDRESQAEYN
ITITVTDLGTPRLKTQHNITVTVSDVNDNAPAFSQAAYTLRVRENNSPALHIGSVSATDR
DSGANAQVTYSLLPPQDPQLPLASLVSINADNGQLFALRSLDFEALRAFEFRVGAADRGS
PALSSQALVRVLVVDDNDNSPFVLYPLQNGSAPCTELVPRAAEAGYLVTKVVAVDGDSGQ
NAWLSYQLLKATEPGLFGVWAHSGEVRTARLLSERDAVKHRLVVLVKDNGEPPLSASVTL
HVLLVDGFSQPYLPLPDAAAAEARADPLTVYLVVALASVSSLFLFSVLVFVAVRLCRRSR
AASGGGCSVPEGPFPGHLVDVSGAGTLSHSYQYEVCLRGDSGTNEFKFLKPILPSFVGEG
AGRGTEENSHFKRNHFGFS
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggagacaacgctacccaaagcgcagcagaaaaggcaagtgaccgccattattatccta
ataatgttaatacggtgggaagtgggcagtacgaccattaagtattcggttctagaagag
agggaaagcggctcctttgtggccaacctcgcgaaagatctggggcttggcttgggggag
ctggccgcgcggggtgctcgaattctttccaaagggaatcaacagtatttgcagctcgag
cagaagagtgggaatttgctcctaaaagaaaaattggaccgggaagagttgtgcggtgac
acagatccatgtatactgcatttccaggtcttattaaaaagcccagtgcagtttattaaa
ggtgaactacagctacgagacataaatgaccatgccccaaaattcttggaaaatgaaatc
ctcctgaaaatctcagaaagcagccgtccagggactgcatttcctttgaaaatagctcaa
gatttagacgtgggcagtaatacagttcagaactacactattggcaacaactcccatttc
caccttttcactcgaaatcacagcgatggcaggagataccctgagctggtgctggacaaa
gcgctggaccgggaggaggagtcagagctcaggttaacgctcatggccatggatggtggg
tcaccgcctaggactgggacttctcaggttctcattgtagtcttggacataaatgataat
gctcctgaatttgctcagctcctctatgaggtgcaaatcccagagaacagccctataggg
tcccttgtcatcactgtgactgctagagatttagatgctgggacccttggagagctctcc
tactcatttttccaatcctcaaatcaagtgattcaggcctttgaaataaactcagtcaca
ggggaaattcgattaaaaaaaatgttggattttgaggaaattcaatcttatcgtatggaa
attgaggcttcagatggcgggggactatcaggaaaatgctctatagccatagaagtgatg
gatgtaaacgacaacacgcctgaactgactatgtcagtattcaccagtgatatcccagaa
aatacccctgataccgtggtcgctatttttggaatttcagatccagactccggggaaaat
ggcaaaatgatgtgttccatccaagaccatctccccttccttttgaaacttactgtagaa
aatttctacaccttagtaactgaaggagcgctggacagagagagccaggccgagtacaac
atcaccatcaccgtcaccgacctggggacccccaggctgaaaacccagcacaacataacg
gtgacggtctccgacgtcaacgacaacgccccggccttcagccaagccgcctacaccctg
cgggtgcgcgagaacaacagccccgccctgcacatcggcagcgtgagcgccacggacaga
gactcgggcgccaacgcgcaggtcacctactcgctgctgccgccccaggacccgcagctg
ccgctggcctcgctggtgtccatcaacgcggacaacgggcagctgttcgcgctcaggtcc
ctggatttcgaggcgctgcgggcgttcgagttccgcgtgggcgcggccgaccgcggctcg
ccggcgctcagcagccaggcgctggtgcgcgtgctggtggtggacgacaacgacaactcg
cccttcgtgctgtacccgctgcagaacggctccgcgccctgcaccgagctggtgcccagg
gcggccgaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccag
aacgcctggctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgg
gcgcacagcggcgaggtgcgcacggccaggctgctgagcgagcgcgacgccgtcaagcac
aggctggtggtgctggtcaaggacaatggcgagccgccgctgtcggccagcgtcacgctg
cacgtgctgctggtggacggcttctcgcagccctacctgccgctcccggacgcggcggcg
gccgaggcccgcgccgacccgctcaccgtctacctggtggtcgccttggcgtcggtgtcg
tcgctcttcctgttctcggtgctggtgttcgtggcggtgcggctgtgcaggaggagccgg
gcggcgtcggggggcggctgctcggtgcccgagggcccctttccgggccacctggtggac
gtcagcggggcggggaccctgtcccacagctaccagtacgaggtgtgtctgaggggagac
tcggggaccaatgaattcaaattcctcaagccaattctccccagtttcgtgggtgagggg
gctggtaggggcaccgaggaaaactctcactttaaaagaaatcattttgggttcagttag
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