Zalophus californianus (California sea lion): 118356960
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Entry
118356960 CDS
T07874
Symbol
PCDHB5
Name
(RefSeq) protocadherin beta-5
KO
K16494
protocadherin beta
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zca04515
]
118356960 (PCDHB5)
Cell adhesion molecules [BR:
zca04515
]
Cadherins
Protocadherins
118356960 (PCDHB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
DUF3124
Motif
Other DBs
NCBI-GeneID:
118356960
NCBI-ProteinID:
XP_035583392
UniProt:
A0A6P9FL94
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All DBs
Position
5:33827147..33833469
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AA seq
795 aa
AA seq
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METALAKTPQKRQVIFLAILLLLWEAGSDAIRYSMPEETESGSFVANLAKDLGLSVGELA
TRGARIHYKGNKQVLQLDIETGNLLLYGKLDREVLCGATDPCILYFQLLLENPVQFFQAD
LQLTDINDHSPQFLEKEMLLKIPENVQPGTVFPLKIAQDLDIGINTVQNYTISPNSHFHV
VTRNRGDGRKYPELMLDKALDREEQSELSLTLTALDGGTPPRSGTTAVHIEVVDINDNAP
QFLQSLYEVPVPENSPLNSLVVVVSAQDLDAGTNGNIVYTLFQGNEVTQPFVIDEITGEI
RLKKALDFEATRYYNVEIAGTDGGGLSGKCTVAIEVVDVNDNAPELTMSTLTSSTPENSP
ETVVAVFSVSDPDSGDNGRMVCSIQKDLPFLLKPTFKNFYTLVTERPLDRESQAEYNITI
TVTDLGTPRLKTQHNITVTVSDVNDNAPAFSQAAYTLRVRENNSPALHIGSVSATDRDSG
ANAQVTYSLLPPQDPQLPLASLVSINADNGQLFALRSLDFEALRAFEFRVGAADRGSPAL
SSQALVRVLVVDDNDNSPFVLYPLQNGSAPCTELVPRAAEAGYLVTKVVAVDGDSGQNAW
LSYQLLKATEPGLFGVWAHSGEVRTARLLSERDAVKHRLVVLVKDNGEPPLSASVTLHVL
LVDGFSQPYLPLPDAAAAEARADPLTVYLVVALASVSSLFLFSVLVFVAVRLCRRSRAAS
GGGCSVPEGPFPGHLVDVSGAGTLSHSYQYEVRLTEGPGSNEFKFLKPIIPKFPPHGAVE
EIEENATFRNSFGFN
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggagactgcgctagcaaaaacgccacagaaaaggcaagttatctttcttgctatattg
ttgcttttgtgggaggctggctctgacgcaattaggtattccatgccggaagaaacagaa
agtggctcctttgtggccaacctggctaaagacctggggctcagtgtgggggagttagct
actcggggcgcgcgaatccattacaaaggaaacaaacaggtcttgcagctggatatagaa
accgggaatttgctgctatatggaaaactagaccgggaggtgctttgcggggctacagat
ccctgtatattatatttccagttattactggaaaacccggtgcagttttttcaggctgat
ctgcaacttacggatataaatgaccattccccacagttcctagaaaaggaaatgctccta
aaaatcccagagaatgttcagccagggaccgtatttcctttgaaaatagctcaggacttg
gacataggtatcaacactgtgcagaactacacaatcagccccaactcccattttcacgtt
gtcactcgtaatcgcggagatggcagaaaatacccagagctcatgctggacaaagcgctg
gatcgggaggagcagtctgagctcagtttaaccctcacggcgctggatggtgggactccg
cccaggtccgggaccactgcagtccacattgaagtcgtggacatcaatgataatgctcct
cagtttttacagtcgctctatgaggtaccggttccagagaacagccccctaaactcctta
gttgttgttgtctctgcccaagatttagatgcaggaacaaatgggaatatagtctacact
ctattccaaggcaatgaagttactcaaccatttgtaatagatgaaattacaggagaaatt
cgtctgaaaaaggcattggatttcgaggcaactcgatactataatgtggaaattgcaggc
acagacggcgggggcctttcaggaaaatgcactgtagctatagaggttgtggatgtgaat
gacaacgcccctgaacttaccatgtcgacgctcacaagctctaccccagaaaactcacca
gagactgtagtggctgttttcagtgtttctgatccagactccggggacaacggtaggatg
gtttgctccatccagaaggatctcccctttctcctgaaacccacattcaagaacttttac
accctagttacggagagaccactggacagagagagccaggccgagtacaacatcaccatc
accgtcaccgacctggggacccccaggctgaaaacccagcacaacataacggtgacggtc
tccgacgtcaacgacaacgccccggccttcagccaagccgcctacaccctgcgggtgcgc
gagaacaacagccccgccctgcacatcggcagcgtgagcgccacggacagagactcgggc
gccaacgcgcaggtcacctactcgctgctgccgccccaggacccgcagctgccgctggcc
tcgctggtgtccatcaacgcggacaacgggcagctgttcgcgctcaggtccctggatttc
gaggcgctgcgggcgttcgagttccgcgtgggcgcggccgaccgcggctcgccggcgctc
agcagccaggcgctggtgcgcgtgctggtggtggacgacaacgacaactcgcccttcgtg
ctgtacccgctgcagaacggctccgcgccctgcaccgagctggtgcccagggcggccgag
gcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcctgg
ctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcacagc
ggcgaggtgcgcacggccaggctgctgagcgagcgcgacgccgtcaagcacaggctggtc
gtgctggtcaaggacaatggcgagccgccgctgtcggccagcgtcacgctgcacgtgctg
ctggtggacggcttctcgcagccctacctgccgctcccggacgcggcggcggccgaggcc
cgcgccgacccgctcaccgtctacctggtggtcgccttggcgtcggtgtcgtcgctcttc
ctgttctcggtgctggtgttcgtggcggtgcggctgtgcaggaggagccgggcggcgtcg
gggggcggctgctcggtgcccgagggcccctttccgggccacctggtggacgtcagcggc
gcggggaccctgtcccacagctaccagtacgaggtgcgtctgacagaaggccccgggtca
aatgagttcaagttcttgaagcctattatccccaaatttccgccccatggagctgtcgaa
gaaattgaggaaaacgccaccttccggaatagctttggattcaattag
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