Zerene cesonia (dogface butterfly): 119828574
Help
Entry
119828574 CDS
T07293
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
zce
Zerene cesonia (dogface butterfly)
Pathway
zce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119828574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zce03019
]
119828574
03041 Spliceosome [BR:
zce03041
]
119828574
Messenger RNA biogenesis [BR:
zce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
119828574
Spliceosome [BR:
zce03041
]
Complex B
Other components
Prp19-related factors
119828574
Complex C
119828574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_2
TPR_8
TPR_12
TPR_15
NRDE-2
TPR_10
DHR-2_Lobe_A
PPR
ARM_TT21
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
119828574
NCBI-ProteinID:
XP_038206702
LinkDB
All DBs
Position
1:3442941..3445824
Genome browser
AA seq
844 aa
AA seq
DB search
MPLLDGKEIEIFFSEEDLPYEEEILRNPFSVKHWLRYIEHKKAAPKQEINLIYERALKEL
PGSFKLWYNYLKLRRTQIRGKCITDPAYEDVNNCFERSLVFMHKMPRIWMDYCSFLIDQC
KITTTRKALDSALRALPITQHHRIWPLYLSFLKKHDIPETAVRVFRRYLKLCPEDTEEYI
DYLISIDKLDEAAVKLAQIVNNENFQSKHGKSNHQLWNELCELISKNPDKIHSLNVDAII
RGGLRRYTDQLGHLWNSLADYYVRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEE
LSLSKKMEEVAKKPNPSEDEDIDLELRLARFEYLMERRLLLLNSVLLRQNPHNVAEWHKR
VKLYEGKPHEIIDTYTEAVQTVDPKLAVGKLHTLWVGFAKFYENNDQIEDARLIFEKATQ
VSYVKVDDLASVWCEWAEMEIRHENYEEALKLMQRATVLPSRKVAYHDENETVQMRLYKS
LKVWSMYADLEESFGTYKSCKAVYDHIIDLKIATPQIIINYGLFLEEHNYFEEAFRAYEK
GIALFKWPNVYDIWNTYLTKFLKRYGGSKLERARDLFEQCLEHCPPEFAKSIFLLYAKLE
EEHGLARHAMSVYERATTAVLPEQMFEMFNIYIKKAAEIYGVPKTRQIYEKAIESLSEEN
AREMCVRFAEMETRLGEIDRARAIYAHCSQMCDPRITAEFWNTWKEFEVRHGNEDTMREM
LRIKRSVQATYNTQVNMMSAQMLSSAAQAAGTISDLAPGMKDGMRMLEAKAAEMAVQSKG
NILFVRGETQGLKDTSDKVVNPDEIDIDEEESENSGEDDNTEIAPVEKKEIPAAVFGGLL
PDKE
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgccgctactggatgggaaagaaattgaaatattttttagtgaggaagaccttccatat
gaagaggaaattttaagaaatcctttttctgtgaagcattggcttcgatatattgaacat
aagaaagctgcaccaaaacaagaaattaatctcatctatgaaagagctttaaaagaacta
cctggctcatttaaattatggtacaattatttaaagttgagaagaactcaaattagggga
aaatgtataacagacccagcatatgaagatgttaataattgttttgaaaggtctctagtt
tttatgcataaaatgcctagaatatggatggactactgttcttttttgattgatcaatgt
aaaattactacaacaagaaaagctttagatagtgcactacgagcattacctataactcaa
catcatagaatttggcccctttatctaagttttttaaagaagcatgatattccagaaaca
gcagttcgtgtttttcgaaggtatcttaagttgtgccctgaagacactgaagagtatatt
gactatcttatttcaatagataaattagatgaagctgctgtcaaactggctcaaattgtt
aacaatgaaaatttccagtcaaaacatggtaaatcaaaccatcaactgtggaatgagttg
tgtgaactaatctctaaaaaccctgataaaattcattctttgaatgttgatgcaattatc
agaggaggccttcgacgctatacagatcagctgggacatttatggaattctctagcagat
tattatgtgagaagtggtttatttgaaagagctagagacatatatgaggaagctattcaa
actgttacaacagtacgtgattttactcaagtgtttgatgcgtatgcacaatttgaagaa
cttagtttaagcaaaaaaatggaggaagttgccaaaaagcctaatcctagtgaagatgaa
gatattgatttagaactaaggctagctagatttgaatatttaatggaaagaaggttgttg
ctcctgaactctgttcttttaagacaaaatccacacaatgtagcagaatggcataaaaga
gtaaaactgtatgaaggaaaacctcatgaaattattgatacttacacagaagcagtgcag
actgttgatccaaaactagcagttggaaaattacatactttgtgggtgggttttgcaaaa
ttttatgaaaataatgatcaaatagaagatgcaagattaatttttgaaaaggctacacag
gtgagctatgttaaggtggatgatttagcatctgtttggtgtgaatgggctgaaatggag
ataagacatgagaattatgaagaagctttaaaattaatgcaaagagctacagtactgccc
agtagaaaagtagcatatcatgatgaaaatgaaacagtacaaatgcgcctttataaatct
ttgaaagtgtggtcaatgtatgcagatttagaagaaagctttgggacatataagtcttgc
aaagcagtttatgatcacataattgacctaaaaatagcaaccccacaaataattatcaat
tatggcctgtttcttgaagaacacaattactttgaagaagcttttagagcatatgaaaag
ggaattgcactttttaaatggccaaatgtatatgatatatggaacacatatttgacaaag
tttttaaaaagatatggtggtagtaaacttgaaagagcaagagatctctttgaacagtgt
ttggaacactgtcctccagagtttgctaaatctatattcctattgtatgctaaattagaa
gaagaacatggccttgctagacatgcaatgtcagtatatgaacgggctactacagcagtc
ttaccagaacagatgtttgagatgtttaacatatatataaagaaagctgctgaaatatat
ggtgttccaaaaacaagacaaatatatgaaaaagcaattgaatccttatcggaagagaat
gcaagagaaatgtgtgttcgtttcgctgaaatggaaacccgccttggtgaaattgataga
gctagagcaatatatgctcattgcagtcagatgtgtgatcctagaatcacagcagaattt
tggaatacttggaaagaatttgaagtgagacatggtaatgaggacactatgagagagatg
cttagaataaagagaagtgttcaagcaacatacaatacacaagtgaatatgatgtcagca
caaatgttaagttcagcagcacaagctgcaggaacaatatctgatttggcaccaggtatg
aaggatggaatgagaatgttggaagctaaagctgctgaaatggctgttcaaagtaagggt
aacatactgtttgttcgaggcgaaactcaaggtcttaaggatacttctgacaaagttgtt
aatcccgacgaaatagacattgatgaagaagaatctgaaaatagtggtgaagatgataat
actgaaattgcacccgttgaaaaaaaagaaatcccagctgctgtttttggaggccttttg
cctgataaggaataa
DBGET
integrated database retrieval system
