Zerene cesonia (dogface butterfly): 119829232
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Entry
119829232 CDS
T07293
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
zce
Zerene cesonia (dogface butterfly)
Pathway
zce03020
RNA polymerase
zce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zce00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119829232
09124 Replication and repair
03420 Nucleotide excision repair
119829232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zce03021
]
119829232
03400 DNA repair and recombination proteins [BR:
zce03400
]
119829232
Enzymes [BR:
zce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119829232
Transcription machinery [BR:
zce03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
119829232
DNA repair and recombination proteins [BR:
zce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
119829232
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
119829232
NCBI-ProteinID:
XP_038207549
LinkDB
All DBs
Position
10:complement(3434749..3442484)
Genome browser
AA seq
1896 aa
AA seq
DB search
MATTCDSKAPLRQVKRVQFGILSPDEIRRMSVTEGGIRFPETMEGGRPKLGGLMDPRQGV
IDRTSRCQTCAGNMTECPGHFGHIDLAKPVFHIGFITKTIKILRCVCFYCSKLLVSPTNP
KIKEVVMKSKGQPRKRLTYVYDLCKGKNICEGGEDMDIGKEGEEGKRGTGHGGCGHYQPS
IRRQGLDLTAEWKHANEDTQEKKITITAERVWEILKQITDEESFILGMDPKFARPDWMIV
TVLPVPPLSVRPAVVMFGSAKNQDDLTHKLADIIKANNELMRNEQTGAAAHVLADNIRML
QFHVATFVDNDMPGMPKAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVITPD
PNLRIDQVGVPRSIAQNLTFPELVTPFNIDRMQELVRRGNAQYPGAKYIVRDNGERIDLR
FHPKPSDLHLQYGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTS
PYNADFDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTK
RDVFLTKEQVMNLLMFLPTWDGKIPQPCILKPTPLWTGKQIFTLIIPGNVNMVRTHSTHP
DEEDDGPYKWISPGDTKVVVEHGELLMGILCKKSLGASAGSLLHICMLELGHETAGRFYG
NIQTVINNWLLLEGHSIGIGDTIADPQTYQEIQRAIVKAKDDVIEVIQKAHNMELEPTPG
NTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACVGQ
QNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLIDT
AVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLAGETVEFQNLPTIK
LSNKAFEKKFKFDPTNERYLKRIFSEDIIKELTESGYVIADLESEWDQLGKDRQVLREIF
PSGESKVVLPCNFRRMIWNVQKIFHINKRSPTDLSPIKVIQGVKDLLKKCVIVAGEDRLS
KQANENATLLFQCLVRSTLCTKFVSEDYRLSTEAFEWLIGEIETRFQQAQVNPGEMVGAL
AAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGGAARD
AEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIAEDQEFVNVYYEMPDFDPTKISPW
LLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNNEESKFQ
DNDEETVDKMEDDMFLRCIEANMLSDMTLQGIEAIAKVYMHLPQTEAKKRIIITEQGEFK
AIAEWLLETDGTSLMKVLSERDVDPVRTFSNDICEIFQVLGIEAVRKSVEKEMNAVLQFY
GLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLDAASHAEVD
PMRGVSENIIMGQLPRMGTGCFDLLLDAEKCKHGMEMGGLGVGMGVGGGMFFGVGTPSMT
PLMTPWSNQNTPGYGSSVWSPGQVGSSMTPGPSFSPSGASDASGMSPSYSAWSPQPGSPG
SPGAPLSPYASPAGASPSYSPTSPVYVGASPSLTPTSQHYSPTSPSYSPTSTHYSPTSPI
FTPTSPGYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPNYSPT
SSSYSPTNPSYSPTSRVYSPTSPAYSPSSPSYSPNGPVYSPASHSYSPSSPNYTSASPAY
SPTSHSYTPTSPQYSPTSPSYTPSSPKYFPTSPKYSPTSPSLSGGSPTYSSPQYSPTSPQ
YSPSPAYSPSSPQHPGSTHYSPSSPNYSSSSPNYSSPGYSPSSTKYSPTSPTFTPTSHNY
SPLSPAYSQSSGGPSTYSPTSPTFTPTSPTYDDGDD
NT seq
5691 nt
NT seq
+upstream
nt +downstream
nt
atggcgactacgtgtgattcgaaggcgcctttgcgccaagtaaaaagagtacagtttggt
attttatcgccagatgaaatccgacggatgtcagttacagaagggggcatacgcttccct
gaaaccatggaaggaggaagaccaaagctcggtggcctcatggatcctcgacaaggggtg
atagataggacatccagatgtcaaacctgtgcagggaacatgaccgaatgtcctggtcat
tttggacacatagacttggcaaaaccagtgtttcacattggattcataacaaagactata
aaaattttgagatgtgtctgcttttactgttcaaaacttcttgtcagcccgacaaatcca
aaaattaaagaagtggttatgaaatcaaagggtcagcctcgtaaaaggttgacatatgtt
tatgatttatgtaaaggaaaaaatatttgtgaaggtggtgaagacatggatattggaaag
gaaggtgaagaaggtaaaaggggaacaggccatggtggttgcggtcattaccaaccatct
ataaggagacaaggtttagatcttacggcagaatggaaacatgctaatgaagacactcaa
gaaaagaaaataacaataacagcagaaagagtttgggaaatacttaaacaaattacagat
gaagaatcttttatcctgggtatggatcctaagtttgcaagaccagattggatgattgtt
actgtattgccagtaccacctctttctgtaagacctgctgtagttatgtttggatcagcc
aaaaatcaagacgatttgactcacaaacttgctgacattataaaagctaacaatgagctg
atgaggaatgaacagacaggagctgcagcccacgtacttgcagataatattagaatgcta
caatttcatgttgcaacatttgtggataatgatatgccaggaatgccaaaagctatgcag
aaatcaggaaaaccactcaaagctattaaagcacgattaaaaggaaaagaaggaagaatt
agaggaaatcttatgggaaaacgagttgacttttcagctcgaactgtaatcacacctgat
ccaaatttacgtattgatcaagtaggagtaccaagatcaatagctcaaaatttgacattc
cctgaattagttacaccatttaacattgacagaatgcaagaactagtgagaagaggtaat
gcacaatatcctggtgcaaaatatattgtacgtgacaatggagagagaattgatttaagg
tttcatccaaaaccctcggatctacatttacaatatggctataaagttgaacgtcatttg
agagatgatgatttggtgatcttcaaccggcaacccactctacacaaaatgagtatgatg
ggtcacagagtaaaagtattgccttggtcaacattccgtatgaatttgagttgcacatca
ccatataatgctgattttgatggagatgaaatgaatcttcatgtaccacagtcaatggaa
acccgtgcagaggttgagaacatccacataacacccagacagattattacaccacaagcc
aataagcccgtcatgggtattgtacaagatacgcttacagctgtgagaaaaatgacaaaa
agggatgtttttcttacaaaagaacaggttatgaatcttctcatgttcttacccacatgg
gacggtaaaattccgcaaccttgtatattaaaaccgacacctctttggactggtaaacaa
atttttactttaattattcctggaaatgtaaacatggttcgaacacattccacccatcca
gatgaggaagatgatgggccatacaaatggatttcaccaggggacacaaaagttgttgta
gaacatggagagttgctaatgggtattttgtgtaagaagtctttgggtgcttctgctggt
tcacttttacatatttgcatgttagagttaggacacgaaactgctggtcgtttctatggc
aacattcaaacagtaattaacaactggctacttctggaaggtcattcaattggtatagga
gacactattgctgatcctcaaacataccaagaaatccaacgtgcgatcgtaaaagccaaa
gacgacgtaatagaggttattcaaaaagctcataatatggagttagagccgacacctggt
aacacattgaggcagactttcgaaaatcaagtaaatcgcatattgaacgatgctcgtgac
aaaactggtggttcagctaaaaaatctctcactgagtacaacaacctcaaagctatggtg
gtgtctggttctaaaggatccaatattaacatctctcaggttattgcttgtgtaggacag
caaaacgttgaaggtaaacgaataccatttggttttcgtaaaagaaccttgccacatttc
atcaaagatgattatggtccagaatccagagggtttgttgaaaactcttatcttgcaggc
ttaacgccatcagagttctatttccacgctatgggtgggcgtgaaggtcttattgatact
gctgtaaaaacagctgaaactggatatattcagcgtcgtcttataaaggctatggagtct
gtaatggtacattatgatggtacagtccgtaattctgtagggcaacttattcagttgcgt
tacggtgaagacggattagctggtgaaacagtagaatttcaaaatctaccgaccattaaa
ctgtcaaacaaagcatttgaaaagaagttcaaattcgatccaacaaatgaaagatacctc
aagagaattttcagtgaagatataattaaagaactaacagaatctggctatgttattgct
gatttagaaagtgaatgggatcaattagggaaagatagacaagtgttacgtgaaatcttc
ccaagtggagaatctaaagttgtgctgccttgtaatttcagaagaatgatttggaatgtc
caaaaaattttccatatcaataaaagatcacctactgacctgagtcctataaaagtgatt
cagggtgtaaaagatttattaaagaagtgtgttattgtggctggtgaagatagactttct
aagcaagctaatgagaatgccacattgctattccagtgtcttgtaaggtctactttgtgt
accaaatttgtgtcagaagattataggctatcaactgaggcatttgaatggttgatagga
gaaatagaaactcgtttccaacaagcacaagtaaatccaggtgaaatggttggagcctta
gctgctcaatctttaggagaaccagccacgcaaatgacattgaatactttccactttgct
ggtgtgtcatccaaaaacgtaacccttggtgtaccacgtcttaaggaaattatcaatatt
tccaaaaaacctaaagctccttcccttaccgtttttcttactggtggtgcagcccgagat
gccgaaaaggctaagaatgttctgtgtcgacttgagcatacgacactgcgaaaagtcacc
gctaatactgctatttactatgatccagatccacaaaatactgttattgctgaagatcaa
gagtttgttaatgtgtactatgaaatgcctgattttgatcccacaaaaatttcaccgtgg
ttattacgtattgaattagatcgtaaaaggatgacagataagaaacttactatggaacaa
atagcagaaaaaattaatgctggttttggtgatgatttgaattgcattttcaatgacgat
aatgctgaaaagctggtacttcgtataaggataatgaacaatgaggaaagcaaattccag
gacaatgatgaggaaacagttgataagatggaggatgatatgttcctgagatgtatagag
gctaatatgctttctgatatgacactgcagggtattgaagctattgcaaaagtgtatatg
catttaccacagactgaagctaaaaaacgtattattattacggaacagggtgaatttaaa
gccattgctgaatggttgttggaaactgatggaacatccttaatgaaagtactttctgaa
cgtgatgtagatccagtcagaaccttcagtaacgatatttgtgaaattttccaagttctg
ggtattgaagctgtacgtaaatctgtggaaaaagaaatgaatgctgtgttacaattctat
gggctgtacgtaaactatcgacacttggctttgctttgtgacgtcatgactgctaaaggt
catcttatggctatcactcgtcacggcattaacaggcaggacacaggtgccttgatgaga
tgttcttttgaagaaacagtagatgttctattagatgcagcaagtcacgctgaagtggat
ccgatgagaggagtctcagaaaatattattatgggtcaacttccaagaatgggaacaggt
tgctttgatttactgcttgatgctgagaaatgtaaacatggtatggagatgggtggtctc
ggtgttggtatgggagtcggcggaggaatgttctttggagtcggcacgccttccatgacc
ccattgatgactccgtggtcaaatcaaaacacgcctggatatggaagcagtgtttggtct
cctggtcaagtcggtagcagcatgacaccagggccatcattttcaccatctggtgcgtca
gacgcgtcgggcatgtcgccgtcatacagcgcgtggtctccgcagcccggctcgcccggc
tcgcctggagctccactttccccgtacgcttctcccgcgggagcctcgccatcttactcc
cccaccagtcccgtatacgtcggcgcttcgcccagcctcacgccgacatcacagcactac
tcgcccacgagcccatcctactcgcccacatcgacacactattctccgacctcgccgatc
ttcactccaacctcgcccggctattctcctacttcacctggatattcgccgacgtcaccg
tcgtattcaccgacttcgccaagctattcacccacatctccgagttattcacctactagt
ccggcgtattcaccaacatcgcccagctattcgccgacatccccaaactactcgccgacc
agctcgtcttattcgcccacaaatccctcttattcacctacgagcagagtatactcgcct
acatctcctgcttactctccgtcgtctcctagttattcccccaacgggccggtgtacagc
ccagcttcgcacagctattcaccatcgtcacccaattacacatcggcctctccggcttat
tcgcctacaagtcattcgtatacaccaacatcgccgcagtattccccaacctcaccaagc
tacacaccatcgtctccaaagtactttccgacgtctccaaagtattcgccgacgtcgccc
tctttatctggaggaagtccaacttattccagtccccaatattctcccacaagcccacaa
tattcacccagtccagcatattccccatcttccccgcagcaccctggcagcactcattat
tcaccatcatctccaaactactcttcatcatcacccaactattcatcgccaggttactct
ccgtcttcaaccaagtattcccctacgtcgccaacatttacaccgacatcccataattat
tctcccctatctcctgcttactcgcaatcatctggcggtccttcgacttattctcctact
tctcctacttttacaccaacgtcacctacatatgatgatggtgatgattaa
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integrated database retrieval system
