Zerene cesonia (dogface butterfly): 119829500
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Entry
119829500 CDS
T07293
Name
(RefSeq) exosome RNA helicase MTR4
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
zce
Zerene cesonia (dogface butterfly)
Pathway
zce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119829500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zce03019
]
119829500
03041 Spliceosome [BR:
zce03041
]
119829500
03009 Ribosome biogenesis [BR:
zce03009
]
119829500
03016 Transfer RNA biogenesis [BR:
zce03016
]
119829500
Enzymes [BR:
zce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119829500
Messenger RNA biogenesis [BR:
zce03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
119829500
Spliceosome [BR:
zce03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
119829500
Complex C
U4/U6.U5 tri-SnRNP related factors
119829500
Ribosome biogenesis [BR:
zce03009
]
Eukaryotic type
Pre-60S particles
Helicases
119829500
Transfer RNA biogenesis [BR:
zce03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
119829500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
ResIII
DUF3379
ATPase_2
Motif
Other DBs
NCBI-GeneID:
119829500
NCBI-ProteinID:
XP_038207970
LinkDB
All DBs
Position
10:1401356..1410165
Genome browser
AA seq
1033 aa
AA seq
DB search
MADLNNLFDCFEDPSSSEVAIQLPNLESDKQDIKAELTPAKKRPHEEVEYADTEIKPEDN
KKIKTDEEEIETIGDLKLDLANSRIVIHTLETHEGCTHEVAIPPNHEYSPLVPISSEPAK
QYSFILDPFQKEAIMCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKKKQRVIYTTPIKAL
SNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIMREVGWVVFDEI
HYMRDKERGVVWEETLILLPDNVHYVFLSATIPNARQFAEWVCRLHSQPCHVVYTEYRPT
PLQHYIFPAGGDGIHLVVDEKGQFKEDNFNTAMAVLSNAGDAGKGDQRGRRGGPKGNNNT
NIFNIVKMIMERNFAPVIIFSFSKKDCELYAMQMAKLDFNTIEEKKLVDEVFNNAMDVLT
EEDRKLPQVENVIPLLRRGIGIHHGGLLPILKETIEILFGLGLIKALFATETFAMGLNMP
ARTVVFTSCQKFDGRDFRFITSGEYIQMSGRAGRRGLDDKGIVILMIDQKVAPATVKGMV
QGKADPINSAFHLTYNMVLNLLRVEEINPEYMLERSFYQFQNQAAIPDLIDKVKAKQKEY
DSLSIDEENSIASYCNIRSQLDLLGAQFRSFITRPEYLKPFLQPGRLVKIKTEKYEYDWG
IIVNFRHKTGKGKKGQDENPLTADTVILVDILLHVKKGKGDEPESNAPCPPGESGDVEVV
PVLHTLIYQISSLRVYYPKDLRPSDSRKSVLKTINEVKKRFPEGPPLLNPIKDMKINDSV
FKDCVDKIKIFEDRLYAHPLHKDKNRAALTSAYEKKQELYEDLKQVKQELHKAKSILQMD
ELKKRKRVLRRMGYCTMADVIEMKGRIACELSSADELLLTELIFNGVFNNLTPEQSASLV
SCFVCDENSTQASSTGEELRGVLRQLQEYARRIAKVSIDAKMAIDEDEYVGKFKCTLMDV
VLAWAKGASFLQICKMTDVFEGSIIRCMRRLEEVLRQLCQAAKNIGNTDLENKFSEAIKM
LKRDIVFAASLYM
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttaaataatttatttgactgtttcgaagatccatcatcaagtgaagtcgcc
attcaattgcccaatcttgaaagtgataaacaggatattaaagcagagctaacaccagcc
aagaaaaggccacacgaagaagttgaatatgcagatacagaaatcaagccagaagataat
aaaaaaatcaaaacagatgaagaagaaattgaaacaataggggacttaaaattggatcta
gccaactcacgtattgtgatacacacattggaaacccatgaagggtgtactcatgaggta
gcaattccaccaaatcatgaatattcacctttggtcccgatatcttcagagccagctaaa
cagtatagttttatattggatccctttcaaaaggaagcaatcatgtgtatagataatttg
caatctgtgcttgtgtcagcacatacttctgcaggaaaaactgttgttgcagagtatgct
atagccttgtcactaaagaaaaaacagagagttatatataccacaccaatcaaagcactt
tcaaatcagaaatatagagagttctctgaagagtttcatgatgttggtttgataactggt
gatgtgacaatcaatccgtctgcttcatgtcttatcatgacaactgagattctaaggaat
atgttatataggggatcagaaatcatgagagaggttgggtgggttgtgtttgacgaaatc
cactacatgagagataaagaaagaggagttgtgtgggaagaaactttaatccttctcccc
gacaatgtgcactatgtgttcctatctgccacgataccgaatgcacgtcagtttgccgaa
tgggtgtgccgtttgcactcgcagccttgccatgtggtatacaccgagtatcgacccact
cctctacagcattacatcttccctgctgggggcgatggtatacatcttgtcgttgatgag
aagggtcagttcaaagaggataattttaacacggcaatggctgtattaagcaatgcaggt
gatgcaggtaaaggcgaccaacgcgggcggcgcggagggcccaaagggaacaataacact
aatatctttaacattgtcaagatgattatggaaaggaatttcgcacctgttatcatattc
agttttagtaaaaaggactgtgagctgtatgcgatgcaaatggcaaaattggactttaac
accattgaagagaagaaattagtggatgaagtgttcaataatgcgatggacgtattaaca
gaggaggatcgtaaattgccgcaagtggaaaacgtaattccattgctgagacgcggcatt
ggtatacatcatggtggtctattgccaatactcaaggaaacgatcgagattctctttggt
ttgggtctaataaaggcacttttcgcgacagagacgtttgctatgggtctcaacatgccg
gcgagaactgttgtgtttacaagttgtcaaaaattcgacggcagagattttcgatttata
acatcaggagaatacatccaaatgtctggtcgtgcgggccggcgtggtctagacgacaaa
ggaattgtgatactcatgattgaccagaaagtagctccagctactgtgaaaggcatggtg
cagggtaaagctgatcctattaattcagcattccatctcacttataatatggtattgaat
ttattacgtgtagaagaaatcaatcctgaatatatgttggagagaagtttctatcaattc
caaaatcaagccgccattccagatctcatagataaggtgaaagcgaaacaaaaggaatat
gactcgcttagcatagacgaagagaactcgatcgctagttattgcaatattcgctcgcaa
ttagatctattgggtgcacagtttaggtcttttatcacacgaccggagtatcttaaacct
ttcctgcaaccgggtcgacttgttaagataaaaacagaaaagtatgaatacgactggggc
ataatagtgaatttccggcacaaaacgggcaaaggcaagaaagggcaagacgaaaatcct
ctcacagctgatacagttatactagtggatatattgctgcatgttaaaaaagggaaaggg
gatgaaccagagagcaacgctccatgtccaccgggcgagtctggagatgtggaagtagtc
ccagtattgcatacgctaatatatcaaataagttcgctccgtgtttactatccgaaggat
ctaagaccatccgatagccgcaaatcggttttaaaaacgataaacgaagtgaaaaaacgc
ttcccagaaggtccgccgctattgaatcctataaaagacatgaaaattaacgattccgta
ttcaaggactgcgtggataaaataaaaatttttgaagacagattatatgcccacccacta
cataaagacaagaatcgtgcagcgttaacgagtgcatatgagaagaagcaagaattatac
gaagatctgaaacaggtgaaacaggagttgcacaaagcaaagagtatactgcaaatggac
gagttgaagaaacggaaacgtgtgcttcgacgaatgggatattgtacgatggctgatgtt
atcgagatgaagggacgaatcgcttgcgagttgagcagcgctgacgagttactattgact
gagttgatattcaacggggttttcaacaacctgacgccagagcagagcgcgtcgctggtc
agctgcttcgtgtgcgacgagaactccacgcaagcctcctccactggcgaggagttgcgc
ggggtacttaggcagttgcaggagtacgcgcgtcgcatagccaaggtgtcgatcgacgcc
aaaatggcgatagacgaggacgagtacgtgggcaagttcaagtgcacgctcatggacgtg
gtgctcgcgtgggccaagggcgcctccttcctgcagatctgcaagatgaccgacgtgttc
gaaggatcaataatccgctgtatgcggcgtctcgaggaagtgctccggcagctgtgtcaa
gcggctaagaacattgggaatactgacttggagaataagttcagtgaagcgatcaaaatg
ttgaagagagacatcgttttcgccgccagtttatatatgtag
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