KEGG   Zerene cesonia (dogface butterfly): 119830468
Entry
119830468         CDS       T07293                                 
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
zce  Zerene cesonia (dogface butterfly)
Pathway
zce03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:zce00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    119830468
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zce03019]
    119830468
Messenger RNA biogenesis [BR:zce03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     119830468
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     119830468
SSDB
Motif
Pfam: RRP4_S1 KH_6 ECR1_N ECR1_N_2 RRP40_S1
Other DBs
NCBI-GeneID: 119830468
NCBI-ProteinID: XP_038209430
LinkDB
Position
11:3549227..3551851
AA seq 300 aa
MSGHVSIRLAAERVNHSVAANNEIPRFFTPGEVICGLQDFMRGHGTYVEDDCIKSSVAGV
MQKVNKLICVRPLKSRYVGEIGDVVVGRVLEVQQKRWKIETNSRLDSVLQLSSVNLPGGE
LRRRSAEDEQMMRQHLQEGDLISAEVQSIFSDGSLALHTRSLKYGKLSQGVLVKVFPSLI
RRRKNHFHNLPCGISIIVGNNGFIWISPQQQEHNMAVEEDRDDSDAFLQPISRSDREAIA
RLKNCIAALVASKMMLDDTSIIFAYEESLKYEDVKDLLDPEAMLDIAFLTQHRINDVMEE
NT seq 903 nt   +upstreamnt  +downstreamnt
atgtctggtcatgtttctattagattagcagctgaaagagttaatcatagtgtggctgct
aacaatgaaatacctaggttttttaccccaggcgaggttatttgtggactgcaggatttt
atgcgaggacatggaacatatgtggaagatgattgcattaaatcatctgtagctggtgtt
atgcaaaaggttaataagttgatatgtgtgcggccgttaaaaagtagatacgttggtgaa
attggcgatgttgttgttggaagagtgcttgaagtacaacagaagagatggaagatagaa
actaactctcggttagattctgttctacaattgtcatctgtaaatttacctggtggtgaa
ctgcgtcgtcgatcagctgaggatgaacagatgatgagacagcacttacaagagggggat
ttgataagtgcagaagttcaaagtattttttctgatggttcattagccttacacactaga
agtttaaagtatggaaagttatcacaaggagtattagtaaaagtatttccctcattaata
aggagaaggaaaaatcatttccacaatttgccatgtggaatatcgataattgtgggcaat
aatggctttatttggatcagtccgcaacaacaagaacacaacatggccgttgaggaagat
agagacgattcagatgccttcttacagcctatcagcagatctgatcgggaagcaatagcc
cgattaaagaactgtattgctgcccttgttgcatctaaaatgatgctcgatgatactagc
ataatatttgcttatgaagaaagtctgaaatatgaggatgtaaaagatcttttagatcca
gaagccatgcttgatatcgcatttttaacgcagcatagaataaatgatgttatggaagaa
taa

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