Zerene cesonia (dogface butterfly): 119833546
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Entry
119833546 CDS
T07293
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
zce
Zerene cesonia (dogface butterfly)
Pathway
zce03013
Nucleocytoplasmic transport
zce03015
mRNA surveillance pathway
zce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119833546
09122 Translation
03013 Nucleocytoplasmic transport
119833546
03015 mRNA surveillance pathway
119833546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zce03019
]
119833546
03041 Spliceosome [BR:
zce03041
]
119833546
Enzymes [BR:
zce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119833546
Messenger RNA biogenesis [BR:
zce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119833546
Spliceosome [BR:
zce03041
]
Complex C
Other components
EJC/TREX
119833546
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119833546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
119833546
NCBI-ProteinID:
XP_038213529
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All DBs
Position
2:627250..628860
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AA seq
425 aa
AA seq
DB search
MADNDDLLDYEDEEQADQQAADGATEAAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVD
CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSENHVYVLVMCHT
RELAFQISKEYERFSKYMAGVKVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILALVNS
KKLNLKHLKHFILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYLKLKENEKNKKLFELLDILEFNQVVIFVKSVQRCIA
LAQLLTDQNFPAIGIHRNMSQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITMVSDENDAKILNEVQDRFDVNITELPEVVELST
YIEGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaacgacgatcttctcgactacgaagacgaagagcaagcagatcagcaagcc
gctgacggagcgaccgaagcggcgccaaaaaaagaggttaagggatcctatgtatctatt
cacagttccggcttcagagattttcttctcaaacctgaaattttgcgagctatagtcgat
tgtggttttgagcatccgtctgaagtacaacacgaatgtataccacaagcggttctgggt
atggatatcttatgccaagctaagtccggtatgggaaagacagctgtgtttgtattagca
acgttgcagcagctcgaaccttccgagaaccacgtctacgttctagtcatgtgtcacacc
agagagttggctttccaaataagcaaggaatacgaacggttctcgaagtacatggctgga
gttaaagtgtcagtattttttggaggtatgccgattcaaaaggatgaagaggttctcaag
actgcgtgcccacacatcgttgtcggcacccctggacgtattcttgctcttgttaatagc
aagaagctgaatttgaagcatttgaaacatttcattcttgatgaatgtgataaaatgtta
gaatctctggacatgagaagagatgtacaagaaatattcagaaatacgcctcatggaaag
caagtaatgatgttctcagccacactgagcaaggaaattcgaccggtatgcaagaaattc
atgcaggaccccatggaagtgtatgtagacgatgaagctaaactgacattgcatggatta
caacaacattatctgaagctgaaggagaatgagaagaataagaagctctttgaattacta
gatatattagagtttaatcaagttgttatatttgtgaaatcagtacaaagatgcatcgca
ttagctcaattactcactgaccagaacttccctgctattggaattcaccgcaacatgtcc
caggatgaacgtctgtcacgctatcagcaatttaaagatttccagaagagaatattagtc
gctacaaacttgtttggaagaggaatggatattgaacgagtcaacatagtcttcaattat
gatatgccagaagattcggacacttacctacacagagttgcacgggcaggaagatttggt
accaaaggtttggccatcaccatggtatctgatgaaaatgatgccaagatcctcaatgag
gtccaagatcgttttgatgtcaacattaccgagttaccagaagttgtagaattgtctacg
tacattgaagggcgatag
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