Zerene cesonia (dogface butterfly): 119833824
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Entry
119833824 CDS
T07293
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
zce
Zerene cesonia (dogface butterfly)
Pathway
zce03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119833824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zce03400
]
119833824
DNA repair and recombination proteins [BR:
zce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
119833824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
119833824
NCBI-ProteinID:
XP_038213942
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Position
18:complement(4143371..4161898)
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AA seq
917 aa
AA seq
DB search
MSSLQPIQALNLDSVKQQAFIKYFRSLPEKPPTTVRIFDRNDYYSVHGSDATTAAREVFS
SISNIKKMGIEPNRLDYLVLSKGNFEILIRKLLLVRRYRVEIYVSEGSAKANEWFLKYKG
SPGCLSQLEEVLGEGLGSPNDNGPCLMAVNIKTDPVTKGRLLGVACITANEYHMSVSEFT
DDDLLTQLETITVQMAPSECLVPQADNDDYKSLKKVMDRANITLTKLKKIDFSTEGVIQD
LNRLLKFKDNQQQDANAFPETTLNSAMASLAAAIRYTSLLTDSTNFGRFRINSIKAECYL
HLDAAALSALNVLPELGDTSHAPARSLYGLLDRCRTQQGKRLLAQWLRQPLRDINLINER
LDIVELLVNNSQLRLPLHDDHLRRIPDLQALARRLTRKKANLHDCYKIYQAIQRLPALLQ
CLAESNSPTVHSSLTEPISELNDDLDKFQQMIETTVDMDAVDRGDFLVKPSFDDQLQTLH
EELEKIQASADKELNRAANDLGLDAGKTIKLENNPQNGFYFRVTLKEEQALRGNKKYTII
DAVKSGVRFKTNKLESITEDYVQTRTNYEKEQDKVVAEIIGIAAGYSECLFCLSHIISRL
DVLVSFAVAATTAPYPYTRPVITESLDELVLKDVRHPCLEVQEGVSFIPNDVVFKRDSCL
MHIVTGANMGGKSTWMRSCGIAVLLAHTGCLVPASVAHVPRLRALCARVGANDREDRGQS
TFMMEMIESAAILRTATPDSLVLVDELGRGTSTYEGCGIAWAIAEKLATESKCFCLFATH
YHELTRLPSLHPNVIVNSHAEASVINQQLLLLHKIVPGPATHSLGLHVAKLADLPDSIIQ
YAEAKQAELETNLFEIESSVETYESNEGQKLMTEFLRKCKQIQETVASDQDMMMEINKLK
QDLLKQNSKYVNSLLAV
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgctacaaccaatacaagctctgaatttagattcagtcaaacaacaagcattc
ataaaatacttcagatcattaccagagaaaccacctacaacagtaagaatattcgatcgc
aatgattactacagtgtgcatggttcggacgcaacaactgcggcgagagaggtgttttcg
tcgatatcaaatatcaaaaaaatgggtatcgaacctaatcggctggactatctcgtactc
tcgaaagggaactttgaaatactgatacggaaacttttactggtacgtcgctacagagta
gaaatatatgtatctgaagggtctgcaaaggccaatgaatggtttttgaaatacaaagga
tcaccaggatgcctctcgcagctggaagaagttctcggcgaaggtctcggttcgcccaac
gataatggaccctgtttaatggctgttaatatcaaaacggatccagttactaagggtcgt
cttttgggagtagcgtgtataacagcgaatgaatatcatatgtcggtatcggaatttact
gatgacgacttgctcactcaattggagactattacggtgcaaatggcgccctccgagtgt
cttgtaccgcaggcggataatgatgattacaaatcgctcaaaaaggtaatggaccgcgcg
aacataacattgactaagttgaagaaaatcgatttctccaccgaaggagtcattcaagat
ttgaacaggcttcttaagttcaaagacaatcagcaacaagacgcgaatgcttttcctgag
actacattaaattcagcgatggcgagtctcgccgcggcaattagatatacttcgctacta
acagatagcaccaactttggaagatttcgtataaattcgataaaagcagaatgctacctg
cacttggacgcagcggcactaagtgcactaaatgtactgcccgagctgggcgacacttcg
cacgcgccggcgcgcagtttgtacggattgctcgatagatgtcgtacgcagcaaggaaaa
agactcttagcacaatggttgcgtcagccgcttcgcgatataaatctcataaatgaacga
ttggacatagttgagttgctggtgaacaattcacaattgcgtctgccgttgcatgatgac
catctacgaaggattccggatttgcaagctttagctcgaagactgacgaggaaaaaggct
aatttacatgattgttataaaatatatcaggcaatacaaagactgccagcattactacaa
tgtttggctgaatcaaacagtccaacagttcattcgtccttaacagaaccaatatctgaa
ctcaatgatgacttggataagtttcaacagatgattgaaaccacagtcgatatggatgct
gttgacagaggtgattttcttgtgaagccatcatttgatgatcaacttcaaacccttcat
gaagagctagagaaaattcaggcatccgcagacaaagagctaaatagagcagctaatgat
ttaggacttgacgcaggcaagacaattaagcttgaaaataatccacagaatggattttat
ttcagggtaacattgaaagaagagcaagcactgcgtggtaacaagaagtacacaataata
gatgctgttaaaagtggtgtgagattcaaaactaataaattggagagcatcactgaggac
tatgttcagactaggactaactatgagaaggaacaggacaaagttgtagcggaaatcatt
gggattgcagctggctattcagaatgtctcttctgtctgtcccacataatatcgcgactg
gatgtgctagtatcattcgctgtagcagcaaccacagccccatatccatacactcggcca
gtaatcacggagagtttggatgaactggtgctgaaggatgttagacacccgtgcttggag
gtgcaggagggtgtgtcgtttatacccaatgatgtggtgtttaaacgagactcatgccta
atgcacatagtaacaggcgcaaacatgggcggcaagtccacttggatgcgttcatgcggg
atagccgtgcttctggcccacacggggtgcttggtccccgcgagtgtggcccatgtccca
cgtttgagagcgttgtgcgctagagtgggggccaacgacagagaggatagaggacaaagt
acatttatgatggaaatgatagagtccgctgctatactgaggaccgctaccccagactca
ctggtgcttgtggatgaactcggtcgaggaacatccacgtatgaaggctgcggcatcgcc
tgggccattgcagaaaaattagcaacggaaagcaaatgtttttgcctgttcgcgacacac
taccacgagctgaccagactgccgagtttgcatccgaacgttatagtgaattcgcacgcg
gaagcatcagtaataaaccaacaattgttgttgttgcataaaatcgtccccggaccggcc
acacattccctgggattgcatgttgcaaagttagctgatttacccgactctattattcag
tatgcagaagcgaaacaagctgaattggaaacaaatttgtttgaaattgaatcgtccgtt
gaaacatacgaatcaaatgagggccagaagcttatgactgaatttctcagaaaatgtaaa
caaatacaagagacggtggcttccgaccaagacatgatgatggagatcaataaacttaaa
caggatctgttaaaacagaacagtaaatatgtgaactccttgttggctgtgtaa
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