Zerene cesonia (dogface butterfly): 119835133
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Entry
119835133 CDS
T07293
Name
(RefSeq) RNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
zce
Zerene cesonia (dogface butterfly)
Brite
KEGG Orthology (KO) [BR:
zce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zce03016
]
119835133
Enzymes [BR:
zce01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
119835133
Transfer RNA biogenesis [BR:
zce03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
119835133
Prokaryotic type
tRNA splicing ligases
119835133
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF6471
ScdA_N
Motif
Other DBs
NCBI-GeneID:
119835133
NCBI-ProteinID:
XP_038215718
LinkDB
All DBs
Position
20:complement(5313267..5315987)
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AA seq
506 aa
AA seq
DB search
MVVRQYNEELKFLEKINPHCWKIKKGFQPNMNVEGVFYVNNTLEKLMLDELRNSCRPGMT
GGFLPGVKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDTSNAKSIVSPGGVGFD
INCGVRLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWS
LREGYVWAEDKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEIYD
KFAAGKMGIERLGQVCVMIHSGSRGFGHQVATDALVQMEKAMKRDQIDVNDRQLACARIN
STEGQDYLKAMAAAANFAWVNRSSMTFLTRQAFAKQFKMAPDDLDMHVIYDVSHNIAKIE
EHVVDGKVKTLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGSMGTCSYVLTGTHQGM
TETFGSTCHGAGRALSRAKSRRNIDYKEVLNKLETMGISIRVASPKLVMEEAPESYKNVT
DVVNTCHAAGISKKTVKLRPIAVIKG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgagacaatataacgaggaacttaaatttcttgaaaaaattaatccacattgc
tggaaaataaaaaaaggttttcaaccaaatatgaatgttgaaggcgtcttctacgttaat
aatacattagagaaattaatgttagatgaattaagaaactcctgccgaccaggcatgaca
ggcgggttccttcctggcgtgaagcaaattgcaaacgtagccgctttacccggtattgtc
gggcgatctgtcggcctaccagacgtccattccggatacgggtttgcaattggaaacatg
gctgcttttgatacatcaaatgcaaaatctattgtatctccaggtggtgtaggatttgat
attaattgtggtgtaagacttttaagaactaacttacatgaaaaagatgttctaccgatt
aaggaacaactagctcagagtttatttgatcacatacctgtaggagttggatcaaaaggc
atcatccccatgaatgccagagatctagaggaagctcttgaaatgggtatggattggtca
ttaagagaaggatatgtatgggcagaggataaagagcattgtgaagaatatggaagaatg
cttaatgctgatccttcaaaagttagtttgagagcaaagaaaagaggtctaccacagctg
ggcacgcttggtgctggtaaccattatgctgaaattcaagttgttgatgaaatatatgat
aaatttgctgccggaaaaatgggtattgaaagacttggtcaagtctgtgtgatgatacat
tctggtagtagaggatttggtcatcaagtagccacagatgcattagttcaaatggaaaaa
gcaatgaagcgagatcaaatagatgtgaatgatcgtcaattggcctgtgctcggataaat
tcaactgagggacaagattaccttaaagctatggctgctgcagctaactttgcttgggtg
aatcgtagttcaatgactttcctaactcgtcaagcatttgccaaacagttcaaaatggct
cctgatgatttagatatgcatgtaatttatgatgtttctcataatattgccaagatagag
gaacatgttgttgatggaaaagttaaaactttgcttgtacatagaaagggatcaacaaga
gcttttcctccacaccatcctttgatacccgttgattatcaattgactggacaacctgtt
ttaattggaggatcaatgggaacttgtagttatgtactcactggtacacatcaaggcatg
actgaaacttttggatcaacttgtcatggagcgggacgagcattgtcgcgtgcgaaatct
aggcgaaatatagattataaggaagtacttaataagcttgaaactatgggcatatcaata
agagttgcatcaccaaaattggtgatggaagaagctccagaatcatataagaatgtaaca
gatgtcgtaaatacctgccatgctgctggaattagtaagaagactgtgaaattacggcca
attgcagttattaaaggctaa
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