Zerene cesonia (dogface butterfly): 119835653
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Entry
119835653 CDS
T07293
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
zce
Zerene cesonia (dogface butterfly)
Pathway
zce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119835653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zce03019
]
119835653
Messenger RNA biogenesis [BR:
zce03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119835653
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119835653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
NOT1_connector
CNOT1_CAF1_bind
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
119835653
NCBI-ProteinID:
XP_038216538
LinkDB
All DBs
Position
Z:complement(6314579..6332691)
Genome browser
AA seq
2413 aa
AA seq
DB search
MNLDPLTFSLLQINNLVVNLNKKNFKQTSQELTQIVNTHGLEAENQLLRSLFTEAAKSSW
DNDRSGTTSTSVHASLLAQILASLLNHPAKSTVVCRAIDNPARSLQKTFKPSNTLLTRLA
RLLKLTTAQDVAFSLVLRRHSSKPEIATFAKQHLKKRFLDLVQCYLDAERGHQAERAGLQ
ECSPEVLQTLLTSLTYDNFRLATVTKDLFLKRLRVDFPREVVPIVLAPLLYPDDTKTPLE
EMTTGSDMAATMMDNSLAEVIRDLGYAFTASVEECKTHMLNFGAREPTAIDVARIISLMV
RYHATIQDTPQIQNPGNFWVNHEAKKDATLGHGEAWNAEVFVQTLKELASNLNWKEVILQ
LDHPEFIVPDRQGLSLLFTILRLGLQSAGYPANIFPVEYLCRRWTNLEGQMSLITNILKH
PDVFSLADYPFHPVSIDLLKSPPETDNKEVATWRCLYLVELLLYASERGYYLQVHDLFKF
PLQHCPDILLLALLQISPPITVFRQELLTTLIPIFLGNHPNSGIILQHAWHTQNPNIKPI
IMHAMADWYMRGDCDQSKLSRILDVAQDLKALSLLLNVQSFPFIIDLACLASRREYLKLD
KWLTDKIRDHGESFVTAMVKFLQRRCPPVIGKVPEEQLPKAAQLPPETVGTMLACLQLCI
PNVQQELQEAIYALITNCQTLILSKTRPNITGIPRAHTRVIETPFNPAGLGGQLFTPHVD
SIASLTPNVANLTLGAPGNTAFAMPGTLGPLVTAPGSPSRLIGAGPNSPFPMIPMQHGAN
VATMSALARMPPGPAMDKHRIPDPIHFPEIMHNVSKEIEDEANGYFQRIYNHPPHPTLSI
DEVLDMLKKFQDSPNKREREVFSCMLRNLFEEYKFFPQYPDKELHITAQLFGGIIEKGLV
PSYVSLGLALRFVLDALRKPEGSKMYYFGIAALDRFKSRLKDYHKYCEHVRAIPHFTEFP
PHLIEYIEYGLQSQEPPTKPQGAVLPATLASMLSQTAVVTVAAPYRTVVPPSCISVLSKN
ANCAAGGIGSRPSIANATNIDTLLTATDRDDKINTPPEAIQDKTAFIFNNLSQLNLQAKC
DELKEIITDEYFPWLAQYLVMKRASIELNFHVLYSNFLDVLKIREINKLVTKETYRNIRV
LLRSDKGIANFSDRSLLKNLGHWLGMLTLARNLPILQVDLDLKALLLEAYHKGQQELLYV
VPFVAKVLESCAKSVVFKPPNPWSMALMNVLAELHQEPDLKLNLKFEIEVLCKNLCLDIQ
DLKPTLYLKDPDKIRTIEFQLSQPKQNKEQQQQQPPQPQPPPNVMTINQTIIQAPQIQMM
PPQTPMIPPEDISAAAPTPTNGLVNDPTLIGVIGIPEPRFNYLDVNVSSTSAFGQKISFN
PHILLFQSYPHLKQFVKPAIERSIQEWIHPVVDRSIKYALTTCEQIIRKDFAFDPDEVRM
RTCAHHMMRNLTAGMAMITCREQIINTITTNLKAAFITALLPTTPQQKDIIESAAAVLAA
ENMELACAFIQKTAVEKALPELDKRLLNDYELRKLARQEGRRYYDPIVLSYQTERIPERV
RLRVGGPTESQIVVYEEFACNIPGFVPVRDAGMFMPKPSSQEQIPQMTYSQVINPTQQMY
GTDEMGALISAAEMFLSNALSVPSFAVQATNMHTLLECLIMARRNRDFVSGYTLLQRAVE
GLLDGHIVQPGASSEHVEMMTRYRDIHLRVLKLLEDARVYGHAWTTKQITCCVTECRDEL
KYNLEAIDCLVRNHLINLPQYDLALAHLMDSGNNYVAVAFAMQLVQLYLVDDRNNMYANE
SDLYHTTETLVRMMSHSRNPPPEGLASLIEAIRINQDPSTYLGERSPLGPTSHIHTGIMQ
VRNREYDDPPGLQEKTENLLREWRNVLLSPLTEIEIAQNFNIYVHRMNMNGILKSDDMIT
RFFRIATQMCVENVYQLLTEDRLNPPPVPPKREKYYAMCDSFIKLVSLLIKNTADAGNPT
PKLNLLNKILGIIAGCLLQDHEEHGANFQQLPYHRLLLILFLDMNMAEPVLESMNYQVLT
AFCHTFRIIRPSLAPGFCYAWLELVAHRAFINRVLAVTPQQKGWGMYSTLLIDLFKFLDP
FLRNTELASPVMMLYKGTLKVLLVLLHDFPEFLCDYHYGFCDEIPPNCIQMRNLILSAFP
RNMRLPDPFTPNLKVDLLAEINLPPRAVINYANLIPSSQFKKDLDAYLKARAPVTFLSEL
RSNMQIVNEPGRRYNSQLMNAVVLYVGTQAIAHIRAKGQTPNMSTIAHSAHMDIFQNFTV
DFDYEGRYLFLNAIANQLRYPNSHTHYFSCCLLYLFAEANSEAVQEQITRMLLERLIVNR
PHPWGLLITFIELIKNPIYKFWSHEFVHCAPEIEKLSRGAGGVSAAALNVQHPPAQSDAL
EQALQKVNIDVRA
NT seq
7242 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggaccctttaacgtttagcttattacaaatcaataatctcgttgttaatcta
aataagaagaactttaagcagacaagtcaagagttaacgcagattgtcaacactcatggc
ttggaagcggaaaaccaactgctgaggtctttgtttactgaagcggctaagtcatcgtgg
gacaacgatcgctcagggaccacaagcaccagtgtccacgcatctcttcttgctcagatt
cttgcctctcttcttaaccatccggctaaatcaacagttgtctgtcgagctattgacaac
cctgctcggtcattgcaaaagacttttaaaccatcaaacacattacttactcgccttgca
aggctactaaaattaacgactgctcaagatgtcgctttctcactggtattaagaagacat
tcttcgaagcctgagatagcaacatttgcaaaacaacatctcaaaaaacgttttttggat
ctagtacagtgttatctcgacgcagagcgtggacaccaagcggagcgtgcaggtcttcag
gaatgcagccctgaagttttgcaaactctattgaccagtctcacttatgataatttcaga
ttagctacggttacaaaagatttgtttctaaaacgattacgtgtggactttccacgtgaa
gtggttcctattgtattagctcctctcctatatcccgacgatacaaagacgcctcttgag
gaaatgacaacaggcagtgacatggccgcaacaatgatggacaattcactggccgaagtt
attcgtgatctcggatatgcttttacagcctcagttgaagaatgcaaaacgcacatgttg
aattttggtgcacgagagcctacagctatcgatgtggcaagaatcatatcactgatggtt
agatatcatgctactattcaagatactccacaaattcaaaaccctggtaatttctgggtg
aaccacgaagccaaaaaagatgctacacttggacatggcgaagcatggaatgcggaagtg
tttgtgcagacattaaaagaacttgcttctaacttgaattggaaagaagtaattcttcaa
ctcgatcatcccgaatttattgttcctgacaggcaaggtttaagcttgctttttacaatt
ttacgcttgggtttacaaagcgcaggatacccagcgaatatctttccagtagaatatctt
tgtcgacgatggacaaatttagaaggacagatgagtcttatcacaaatattcttaaacac
cctgatgttttcagcctcgctgattatccttttcatccagtgtctattgatttactgaag
tcgcctccagaaactgacaacaaagaagtagcaacatggcgttgtctctatttagtcgaa
ctgcttttgtatgcctccgagcgtggatattatttacaagtacatgacctatttaaattt
ccactgcagcactgtcctgatatcttgctcttggcattgctgcagatcagtccacctatc
actgtttttagacaggaattgctgactactctaataccaattttcttgggaaatcatccg
aattctggcatcatattacaacatgcttggcatactcaaaacccaaacataaaaccaatt
ataatgcatgctatggcagactggtacatgcgcggtgattgtgatcagtcaaaactatca
agaatattggatgttgcacaggacctcaaggcgctttccctcctattgaatgttcaatca
ttcccattcataatcgatctggcgtgtttagcatctcggagagaatatttaaaactcgat
aaatggcttacagacaaaatacgagaccatggtgagtcatttgtaacggctatggttaag
tttctacaacgacgatgtccacccgtcattggtaaagtacccgaagaacagcttcctaaa
gcagctcaactaccgccagaaacagtgggcacaatgttagcatgcctacaactttgcatt
cctaatgttcaacaagagttacaggaagcaatttacgcactaattacaaattgtcaaaca
ttaatactaagtaaaactagaccaaacattacaggaataccaagagcacacacgagagta
atagaaacacccttcaaccctgctggtttaggggggcagctattcactccgcatgtcgat
tctattgcaagtttaactcctaatgtagcgaatctgactcttggggctcccggtaatacg
gcatttgctatgcctggcactcttggacctttagtgactgctcctgggtcaccgtctcgt
ctaattggtgccggtccaaatagcccctttcctatgataccgatgcaacatggtgctaat
gtggcaactatgagtgctttagcccggatgccgcctgggccagcaatggataaacatcgt
atacccgatccaatacattttcccgaaatcatgcataatgtttctaaggaaatcgaagat
gaggctaacggctattttcaaagaatctataatcatcctcctcatccaactctatccatt
gatgaagtgctcgatatgttgaagaaatttcaagattcgcccaacaaaagagaacgcgaa
gtgttctcctgcatgttgagaaatttgtttgaagaatacaaattctttccacagtaccca
gataaggaattgcacataactgcgcaactatttggtggtatcatcgaaaaggggctagtt
ccaagttacgtatcacttgggctagctttgagattcgtcttagacgctttaaggaaacct
gagggttctaaaatgtactactttggcattgccgcattggacaggtttaagtccaggctt
aaagattatcataaatattgcgaacatgtgagagccatccctcattttactgaattccct
ccacacttgattgaatacatagaatacggcctgcagagccaagagccgcctactaaacca
caaggagcggtgttacccgcaactttagcttctatgttgagtcaaactgctgttgtaact
gttgctgcaccttacaggacggttgttccacctagctgcatatctgtattatcgaaaaat
gcaaactgtgctgccggtggcataggcagtagaccatccattgccaatgcaactaacatt
gacacattattgactgcaacggatagagacgataagataaatacacctccagaggctatt
caagataaaactgctttcattttcaataacctcagtcagctcaatttacaggcgaagtgt
gatgaattaaaagaaataataactgacgaatattttccttggcttgcgcaatatcttgtc
atgaaaagagcatcaattgaattaaattttcacgttttatattcgaatttcctagacgtg
ctcaaaataagggaaattaataaactggtgacaaaagaaacatatcgaaacatcagagta
ttattgcgttctgacaaaggcatagctaacttttccgaccgttcattgctcaagaatctt
ggtcattggttaggcatgcttacattggcacgtaatttacccatccttcaagtcgattta
gacctcaaagcacttctacttgaagcttatcacaaaggccaacaagagttattatatgtg
gtgccgtttgtagccaaggtcttagaatcctgcgctaagagtgttgttttcaaaccgccc
aatccatggtcaatggctcttatgaatgttctggctgaattacatcaagaacctgatttg
aaactaaatttgaagtttgaaatagaagtactttgtaaaaacctttgtcttgacatacaa
gatttgaagcctactctctacttaaaagatccagacaagataagaaccatcgagttccag
ctttcacagcccaaacaaaataaagagcagcaacaacaacagccaccgcagcctcagcca
ccgcccaatgtcatgactattaatcaaacgattattcaagctcctcaaatacagatgatg
ccaccacagacgccaatgattcccccagaagatatttctgctgcggcgccgactccaact
aacggcttagtaaatgatcctaccctaataggtgtaataggaatcccagaacccagattt
aattacttggatgttaatgtatcttcaacatccgcttttgggcaaaagatttcgttcaat
ccgcatatcttgctattccaaagctatccgcatttgaagcaattcgtgaaaccagccatc
gaacgctccatccaagaatggattcatcccgttgtcgaccgatcgatcaaatacgcacta
acgacttgcgaacaaataattagaaaagattttgctttcgatcccgacgaagtacgaatg
cgcacatgtgcacaccacatgatgcgtaacttgacagctggcatggcaatgattacttgc
cgagagcaaatcataaacactatcaccactaatttgaaagctgcatttatcactgcccta
ttaccgactacacctcagcagaaggacataatcgaaagcgccgcagccgttctcgcagct
gagaacatggagttagcgtgcgcattcatacagaaaaccgccgtcgagaaggcgttacca
gaactcgacaaacgattgctcaatgactacgaattgaggaaactggcgagacaagaaggt
agacgatactacgatccgatcgtcttgagctaccaaactgagagaatcccagaaagagtc
cgcttgcgtgtaggcggtccgactgaatcacaaattgttgtttacgaagaattcgcttgt
aacatccccggttttgtgccagtgcgtgacgctggtatgttcatgcccaagccctcatcc
caagaacagataccgcagatgacttacagccaagtcattaacccaactcagcagatgtac
ggcaccgacgaaatgggtgcgctgatttcggctgcggaaatgttcttgagcaatgccctc
tcggttccctcctttgccgtgcaggccacaaacatgcacacccttcttgagtgtctcatc
atggcaagaaggaatcgtgactttgtttctggatatacactgcttcagagggccgtagag
gggcttctagacggtcacatagtacagccaggcgcaagtagcgagcatgtcgagatgatg
acacgctaccgcgatatccaccttcgagtcctgaagcttctagaagacgccagggtttac
gggcacgcatggactacgaaacaaataacctgctgtgtcacggaatgtcgtgatgagctc
aaatacaacttagaagcgatagattgtcttgtgagaaatcatctaattaatctacctcaa
tatgaccttgcgctcgcgcacctcatggacagcggcaacaattacgtggctgtggcgttt
gcgatgcaacttgttcagctgtacctggttgatgacaggaacaacatgtacgctaacgag
tccgacctgtaccacaccacggaaacgctagtgcgtatgatgtcgcactcccgcaaccct
ccgccagaggggctcgcgtctctcatagaagctattagaattaaccaagaccctagcacg
tatttgggtgagcgatcaccgctcggtcccacttctcatattcacactggaatcatgcaa
gtgcgaaaccgtgaatacgacgacccacctggtctacaggagaaaactgagaatctttta
cgcgaatggcgcaatgttttgctgagcccacttactgaaatagaaatagcgcagaacttc
aacatatatgtacatcgcatgaatatgaatggaatactcaaatccgacgacatgatcaca
agattctttagaattgcgacacaaatgtgtgtcgaaaatgtttaccagctgttgactgag
gacagactcaacccaccgcctgtgcctccaaagagggagaaatactacgcaatgtgtgac
tctttcattaaattggtgtctttgctaatcaagaacacagctgacgccggtaatcccaca
ccaaagttgaatttgttgaacaagatccttggaatcatcgctggctgcttgttacaagac
cacgaggagcacggagctaatttccaacagcttccgtaccacagactgctactcattctc
ttcctggacatgaatatggctgaacctgttttagaatctatgaactatcaggttctcacc
gcattctgccacacgttccgcatcatccggccgagcctcgcgccgggcttctgctacgcg
tggctcgagctcgtcgcgcaccgggcgttcatcaaccgcgtgctcgccgtcacgccgcaa
cagaagggctggggaatgtattcgacactcctcattgatctgttcaaattcttagatccg
ttcctacgcaatacagagcttgcctcaccagttatgatgctttacaaaggcacactgaaa
gtgcttctcgtattgctccacgatttcccggaattcctttgcgactatcattatggattc
tgcgatgagataccgccgaactgtatacagatgagaaacctgattctctctgcatttcct
cgtaacatgcgactgcccgacccgttcacgccgaatctgaaagtagatttgctggccgaa
atcaaccttccgccccgcgccgttatcaactacgcaaatctcatcccgtcgtcgcaattc
aagaaggatctggacgcgtacctcaaggcgagagctccagtcactttcctctctgaattg
agaagcaatatgcagattgtgaacgagccgggccgtagatacaacagccagctgatgaac
gccgttgtgctgtacgtgggcacacaggccatcgctcacatcagggctaaggggcaaacg
ccgaacatgtcgacgatagctcactccgcacatatggacattttccaaaacttcacggtt
gatttcgattacgaagggcgctacctgttcctgaacgcgattgcgaaccagctccggtac
ccgaacagccacacccactacttcagctgctgtctactgtacctgttcgccgaggccaac
tcggaggcggtccaggagcagatcacgaggatgctgctcgagaggctcatagtaaacagg
ccgcacccttggggtctgctcatcaccttcattgaactcatcaagaaccccatatacaag
ttctggtcccacgaattcgtccactgtgcaccggaaatcgagaagctctcaagaggcgca
ggcggagttagcgccgcagccctcaacgtccagcatccccccgcccaaagtgatgcactg
gaacaagctcttcaaaaagtaaacattgacgtgcgtgcgtga
DBGET
integrated database retrieval system
