Zerene cesonia (dogface butterfly): 119838966
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Entry
119838966 CDS
T07293
Name
(RefSeq) LOW QUALITY PROTEIN: U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
zce
Zerene cesonia (dogface butterfly)
Pathway
zce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119838966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zce03041
]
119838966
Spliceosome [BR:
zce03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
119838966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
PRP4
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_EML
Beta-prop_SCAP
WD_LRWD1
WD40_RFWD3
MIOS_WD40
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
119838966
NCBI-ProteinID:
XP_038221051
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MSDDDDVILVKKQRTVHYGSLEEQEKARLAALAAAAKEGFDDDDGKEMGDIQISNEYMEL
DEEMSRDKKALLEEFERRRKARQLNVSTDDDEVRRSLRQLGEPVCLFGEGPAERRVRLRD
LLSYLGEDAINKKLEEEEARIERDRGREGTWYHEGPPELREARLWIARYSLPRAKRRLMN
AREELQLPGSIRAAAKQESQRKASAMSIYCSQIGDTRPISFCRFSSDSQMLITSSWSGLV
KVWSVPDCIPLQTLKGHKCNVSSATFHPQATIPHHFLEKXQTDNLNKCYXISSDKPIASR
YVIYXISSDKPIGSLEGHSPSRVSRVQFHPSGRFLAASVFDHSWRLWDLETATEVLHQEG
HAKPVYSVSFQCDGSLAATGGMDAFGRVWDLRTGRCVMFLEGHLGAVLGVDWSPVGHHLA
TAAADHQTKIWDLRRRACLYTIPAHTHLLSDVRYQKSHGHFLLTSSYDKTAKLWSNPAWH
PLRTLSGHDNKVMSADISMDNKFIATCSYDRTFKLWAPDLV
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgatgatgatgtgattcttgtaaaaaagcaaagaacagtgcactatgggtca
ctggaggagcaagaaaaagcgcggcttgctgcgctggcagccgctgctaaggagggattc
gatgatgacgatggtaaagaaatgggtgatattcaaatatccaatgaatacatggaactc
gacgaagaaatgtcgagagacaagaaagcactccttgaggagtttgagaggagacggaaa
gctaggcaactgaatgtttctactgatgatgatgaggttcgcagaagtttacgtcaattg
ggcgagccggtgtgcctgtttggagagggtccggccgagaggagagtgcggctgcgagat
ctgctcagttacctcggcgaagacgcgataaacaaaaagctagaagaggaggaggccagg
atagaacgggacagaggcagggagggcacctggtatcacgaggggccacccgaactgcga
gaggctaggctgtggatagctagatactcactacctagggctaaacgaaggttgatgaat
gcgcgcgaggagttacaattaccgggcagtatacgggccgcggccaagcaagagtcgcag
aggaaagcgtcagcgatgtctatttattgcagtcagattggtgacacacgtccgataagt
ttttgccggttcagcagcgatagtcaaatgcttataacatcaagctggtccggtctggtg
aaggtctggtcggtgccggactgtatcccactgcagacgctcaagggccataagtgtaac
gtcagctcggcgacctttcacccccaggccactatcccccaccattttttggaaaaatga
caaaccgacaacctcaataaatgttattaaatttccagtgacaaaccgatcgcctcaaga
tatgttatttattaaatttccagtgacaaaccgataggctcgctggagggccactcgccg
tcccgcgtgtcgcgcgtccagttccacccgtcgggcaggttcttggcggcgagcgtgttc
gaccactcctggcggctctgggatttggagactgccacggaggtattgcatcaagagggt
cacgcgaaacctgtatacagcgtgtcgtttcagtgcgacggctcgcttgctgctacaggc
ggcatggacgcgttcggtcgcgtgtgggacctgcggacgggccgctgcgtgatgttcctc
gagggccacctgggggccgtgctgggggtcgactggtccccggtggggcaccacctggcc
accgcggccgctgaccatcagacgaaaatctgggatctgcggcgacgcgcctgcttgtac
acaatacctgcgcatacgcatttgttgagtgacgtgcgataccaaaagagccacggccac
ttcctgctgacgtcatcgtacgataagaccgcgaagctgtggtccaaccccgcctggcac
ccgctcaggaccctctccggacatgataataaggtcatgagcgcagatatatctatggac
aataagtttatagctacatgctcttatgataggacattcaaactgtgggctccagactta
gtgtaa
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