Zerene cesonia (dogface butterfly): 119839564
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Entry
119839564 CDS
T07293
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
zce
Zerene cesonia (dogface butterfly)
Pathway
zce03020
RNA polymerase
zce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zce00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119839564
09124 Replication and repair
03420 Nucleotide excision repair
119839564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zce03021
]
119839564
03400 DNA repair and recombination proteins [BR:
zce03400
]
119839564
Enzymes [BR:
zce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119839564
Transcription machinery [BR:
zce03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
119839564
DNA repair and recombination proteins [BR:
zce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
119839564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
119839564
NCBI-ProteinID:
XP_038221846
LinkDB
All DBs
Position
1:3432577..3436334
Genome browser
AA seq
1176 aa
AA seq
DB search
MYDTEDDQYEEEDVEEISSELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DSPPIELQAEAQHSSGEIETPPKYHLKFDQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIVKENEDPIETQHQKTFIGKIPIMLRSTYCLLSNLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKTEIRSCLEHSSRPTSTLWVNMM
ARGGQSIKKSAIGQRIVAIVPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGARGARPGVTKERRIKYAREILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLLKEVRMYAQ
KFIDKGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRICRPLLIVENGALLLKKKHIDQLKERDYNNYGWQNLVASG
VVEYIDTLEEETVMIAMSPDDLAQVKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSI
VAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSESKRIGDQEEQFEKPTRQTCQG
MRNALYDKLDDDGIIAPGIRVSGDDVVIGKTITLPENDDELEGTTKRYTKRDASTFLRNS
ETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCE
GLTPDIIINPHAIPSRMTIGHLIECIQGKVSSNKGEIGDATPFNDAVNVQKISSLLQEYG
YHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECKG
CKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVIA
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacactgaagatgatcaatatgaggaagaagatgtggaagaaatatcatcggag
ctctggcaagaagcttgttggattgtcatcaatgcctattttgacgagaaaggtttagtt
agacaacagttagatagttttgatgaatttattcagatgtccgtgcaacgtattgttgaa
gattctccacctattgaacttcaagcagaagcacaacattcatccggtgaaatcgaaaca
cctcccaagtatcatttaaagtttgatcagatttatctttcaaaaccaacccattgggaa
aaagatggtgctccatcgcctatgatgcctaatgaagcacgtttgcgtaatttaacttat
tctgctccattgtatgttgatattactaaaactattgttaaagaaaatgaagatccaatt
gaaactcagcaccaaaaaacgtttattggtaaaatccccatcatgttaaggtccacatac
tgcctgctgagtaatcttactgacagagatttaactgaattgaatgagtgcccacttgac
cctggtggttattttattattaatggatcagagaaagtgttgattgctcaagaaaaaatg
gcaacaaatactgtttatgtatttagtatgaaagatggtaaatatgcttacaaaactgaa
attcgttcctgcctcgaacacagctcaagaccaacatcaactctttgggttaacatgatg
gctcgcggtgggcaaagcattaaaaaatctgctattggacaaagaattgttgccattgta
ccctacattaaacaggagatacccataatgattgtatttcgagcacttggattcgtagct
gatagggatatattggaacatattatttatgactttgatgatcctgaaatgatggaaatg
gtgaagccctctttggatgaagcttttgttatacaggaacagaatgtggctcttaacttt
attggggcaagaggtgcaagacctggtgttactaaggaaaggcgtataaaatatgccagg
gaaattttacaaaaagaaatgttgcctcatgttggtgtgtccgatttctgtgaaacaaag
aaggcttatttcttagggtatatggtgcatagattgctcttggctgcattaggtcgccgt
gagttagatgacagagatcactatggaaataagagattagatcttgcaggtcccctgttg
gctttcctttttcgagggttatttaagaatctacttaaagaagtgcggatgtatgcccag
aaatttattgacaaaggaaaagatttcaatcttgaattagctattaaaacaaaaattatc
actgatggcttaagatactcattggctactggaaattggggagatcagaaaaaggctcat
caagcaagagctggagtgtcacaagtattgaatcgtttaacatttgcttcaacactctca
catttgcggcgtgttaattcgcccattggacgtgatggtaaattagctaagcctcgccag
cttcataacaccctttggggaatgatatgtccagctgaaaccccagaaggtgctgctgtc
ggattagtaaagaatttggctcttatggcttacatttctgttggaagtcaaccttcgcca
attttagagttcttggaggaatggtctatggaaaatttggaagaaatagcaccatcagcg
attgcagatgctacaaaaatatttgtaaatggttgttgggttggaattcacagagatccg
gaacagttgatggcaactttaagaaagctgagacgtcaaatggatattattgtgtctgaa
gtaagtatgattcgtgatattagggatagagaaattagaatatacaccgatgcaggcaga
atttgccgtcccctgctgattgtagagaatggagcattactgctaaagaaaaaacatata
gatcaactcaaagaaagggattataacaattatggttggcaaaacttagtagccagtggt
gttgttgaatacattgatactttggaagaagagactgttatgattgcaatgagtcctgat
gatcttgctcaagtaaaggaatatgcctactgtactacctatactcattgtgaaattcat
ccagcaatgattttaggagtttgtgcatcaattattccatttccagatcataaccaaagc
ccaagaaatacttaccaaagtgctatgggtaaacaagctatgggtgtttatattaccaat
ttccatgtgagaatggacaccttagctcatgtattgtactaccctcacaaaccattagta
acaacaagatctatggaatatttgcgttttagagaattgcctgccggaattaattctatt
gttgcaatcttatgttatacgggatacaaccaagaagatagtgtcattttaaatgcttct
gctgttgaaagagggttctttagatccgttttctaccgatcttacaaagattcagaatca
aaaagaataggggaccaggaagagcaattcgaaaaaccgactagacaaacttgtcaagga
atgagaaatgctttgtatgataagttagatgatgacggaattattgctcctggtataaga
gtttcaggggatgatgtagttataggaaaaacaattactttacccgaaaatgatgatgaa
ttagaaggaacaactaaacgctatacaaaacgtgatgcttcaacgttcttgcgtaatagt
gaaactggtattgttgatcaagtcatgctaacactaaatagtgagggctacaaattctgt
aaaatacgagtgagatctgtacgtatacctcaaattggcgataaatttgcttctcgccac
ggtcaaaagggtacttgcggtatacagtacagacaagaagatatgccctttacttgtgaa
ggtttaactcccgatatcattatcaatcctcacgccattccatctcgtatgaccattggt
cacttgatcgagtgtattcaaggaaaggtatcatcaaataaaggtgagatcggtgatgcc
acgccatttaacgatgctgtaaatgtgcaaaaaatttcttcattattgcaagaatatggc
tatcatctacgtggtaatgaagttatgtacaatggtcacactggaagaaagataaatgct
caagttttcttgggtcctacatattatcaacgtctaaagcacatggtagacgataaaatt
cactcaagagctagaggaccagtgcaaattttggtccgacaacctatggagggtagggcg
agagacggaggtcttcgttttggtgaaatggaacgtgactgccaaatcgctcacggcgca
gcacaatttctaagagagcgtctattcgaagtatccgatccatacagaattcatgtttgc
aatttttgtggtttaattgcaattgctaatcttcgaaataatacatttgaatgcaaagga
tgcaaaaacaaaactcagatttcccaagttagacttccatatgctgcaaaacttttattc
caagagttaatgtcaatgaacattgcaccacggctgatggttattgcttaa
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