Zerene cesonia (dogface butterfly): 119840104
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Entry
119840104 CDS
T07293
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
zce
Zerene cesonia (dogface butterfly)
Pathway
zce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119840104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zce03041
]
119840104
Spliceosome [BR:
zce03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
119840104
Complex C
U5 SnRNP specific factors
119840104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
HAT_PRP39_C
Suf
TPR_2
HAT_Syf1_CNRKL1_N
TPR_17
TPR_16
HAT_Syf1_CNRKL1_C
FAT
TPR_CcmH_CycH
ANAPC3
TPR_21
Iml2-TPR_39
ARM_TT21
ARM_TT21_N
TPR_12
ChAPs
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
119840104
NCBI-ProteinID:
XP_038222541
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All DBs
Position
5:5826653..5834687
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AA seq
937 aa
AA seq
DB search
MSVPPQAFVNKNKKHFLGIPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPA
AKRKKTEEEDDDEDLNDSNYDEFSGYSGSLFSKDPYDKDDAEADAIYESIDKRMDEKRKE
YREKRLKEDLERYRQERPKIQQQFSDLKRELKTVSEDEWAAIPEVGDARNRKQRNPRAEK
FTPLPDSVLSRNLGGESTTSIDPGSGLASMMPGVATPGMLTPSGDLDLRKIGQARNTLMT
VKLSQVSDSVTGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAW
IASARLEEVTGKVQAARNLIMKGCEVNPSSEELWLEAARLQPRDTARAVIAHAARNLPHS
VRVWVKAADLEQETKAKRRVYRKALEHIPNSVRLWKAAVELENPEDARILLSRAVECCPT
SVELWLALARLETYENARKVLNKARENIPTDRQIWVTAAKLEEAHGNTHMVEKIIDRAIT
SLSANGVEINREHWFKEAMEAEKSGAVHTCQAIIRAVIGHGIEPEDQKHTWMEDAEACAN
EGAYECARAVYGYALSVFPSKKSIWLRAAYLEKQHGSRASLEALLQRAVAHCPKSEVLWL
MGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENKEYDRARRLLAKARASA
PTPRVMIKSAKLEWALNNMDEALKLLDEAIKVFSDYAKLHMMKGQIEEQMGKDDDAHNTY
SQGLKKCPTCVPMWILLSRLEEKLKHVTKARSVLEKARLRNPKNAELWLESVRLERRAGG
AGGAGGAGGEVAHALMAKALQECGGAGRLWADAIFMEARPQRKTKSVDALKKCEHDAHVL
LAVSQLFWTERKLNKCREWFNRTVKIDPDLGDAWAYFYKFELLHGNEQQQEDVKSRCKAA
EPHHGENWCKVSKDIANWCFSTEQILLLVAKNLPVPT
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtaccgccgcaagcttttgtaaataaaaacaagaagcattttcttggtattcca
gctcctcttggttatgtagctggtgttggtagaggtgccacaggtttcactacaagatct
gatattggtccagccagagacgcaaatgatgtatctgatgatcgccatgctccacctgca
gctaaacgcaagaaaacagaggaagaagatgatgatgaagatttaaatgattccaattat
gatgaattttctggatatagtggctctctcttttcaaaggatccatatgataaagatgat
gccgaagctgatgctatttacgaatccattgacaagagaatggatgaaaaaagaaaggaa
tatagagaaaaacgtttaaaagaagacttggagagatatcgtcaagaaaggccaaaaatc
caacaacaattttcagacctcaaacgtgaattgaaaacggtctctgaggatgaatgggct
gcaataccggaagtgggtgatgctcgcaatagaaagcagcgaaatcccagggctgagaag
ttcacacctcttcctgacagtgtgctatcaaggaaccttggaggggagtcaacaacttcc
attgatcctggctctggtctagcttccatgatgcctggtgttgctacaccaggcatgctg
acaccttcaggtgacttggatttaagaaagattggacaggcaagaaacactttaatgaca
gtgaagctatcacaagtgtcggactcagtgactggacaaacggttgtagaccctaaaggt
tacttaacagatctacagtctatgattccaacatatggtggggatatcaatgatattaag
aaggctagacttctgctgaaatctgtgagagaaacaaatcccaatcatccacctgcatgg
attgctagtgcaagacttgaagaggttacaggtaaagtgcaagcggctcgcaaccttata
atgaaagggtgcgaagtgaaccccagtagcgaggagctctggctcgaagctgctcgattg
caacccagagatacagcgcgggcggtcattgcgcacgcggcgaggaacttgccgcacagt
gtaagggtttgggtgaaggcggccgatctggaacaagagacaaaggcgaaacgtcgcgta
taccgcaaagctctcgaacacattccaaactcggtccgtctctggaaggcggccgttgaa
cttgaaaacccggaggacgctcgtatattactgtccagagcagtggaatgttgtcccacc
agtgtggagctttggctggctctggcaagactggagacatatgaaaatgctaggaaagtg
ttaaataaggcccgggagaatatacccacagatagacagatttgggtcacagctgctaag
ctggaagaggcacatggcaatacacacatggtggagaaaatcatagatcgtgcaatcaca
tcgctgagcgctaatggtgtggaaattaaccgcgaacattggttcaaagaagcaatggag
gcggagaaatctggggccgtacatacgtgtcaagcaattattcgagctgtgattggacat
ggcattgaaccagaagatcaaaagcacacttggatggaggacgcagaagcgtgcgcgaac
gagggcgcgtacgagtgcgcacgcgcagtgtacgggtacgcgctgtcagtgttcccgtcc
aagaagtccatctggctgcgggccgcgtacctggagaagcagcacggcagccgcgccagc
ctcgaggcgctgctgcagcgcgccgtggcgcactgccccaagagcgaggtgctgtggctg
atgggtgccaagtccaagtggctagctggcgacgtaccggcggcgagaggcatcctgtcc
ctcgctttccaagcgaaccccaactcggaggagatctggctggcggccgtcaagctcgag
agcgagaacaaggagtacgacagagcgagacggctgctcgccaaggcgcgagcgtccgcg
cccacgccgagggtaatgataaaatcggcaaaactcgaatgggcgttaaataacatggac
gaagcgctcaaactactggacgaagccataaaggtgttcagcgactacgccaagctgcac
atgatgaagggccaaatcgaggagcagatgggcaaagatgacgatgcgcataacacttat
tcacaggggctaaaaaaatgtccgacttgtgtcccaatgtggattttgctgtcccggctg
gaagaaaaactcaaacacgtgaccaaagccagatcggtgctagaaaaggctcgcttgagg
aaccctaagaacgctgagctttggttggaaagcgtgcggctggagcggcgcgcgggcggc
gcggggggtgcgggcggcgcgggcggggaggtggcgcacgcgctgatggcgaaggcgctg
caggagtgcggcggcgcgggccgcctgtgggccgacgccatcttcatggaggcccgcccg
cagcgcaagactaagagcgtggatgcgttgaagaaatgcgagcacgacgcacacgtgctg
ctggccgtgtcgcagctgttctggaccgagaggaaactgaacaagtgtcgcgaatggttc
aataggacggtaaaaatcgatccagacctcggcgacgcgtgggcgtacttctacaagttc
gagcttctgcacggcaacgagcagcaacaagaagacgtgaagtctcgttgcaaagcggcg
gaaccgcaccacggcgagaactggtgcaaagtgtccaaggatatagctaactggtgtttc
agtacggagcagatattgttgctagtcgctaaaaacttgcctgtgcccacgtag
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