Zobellella denitrificans: AN401_02230
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Entry
AN401_02230 CDS
T05100
Name
(GenBank) RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
zdf
Zobellella denitrificans
Brite
KEGG Orthology (KO) [BR:
zdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zdf03009
]
AN401_02230
Enzymes [BR:
zdf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AN401_02230
Ribosome biogenesis [BR:
zdf03009
]
Prokaryotic type
rRNA helicases
AN401_02230
BRITE hierarchy
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_19
Helicase_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ATG72816
UniProt:
A0A231N214
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All DBs
Position
complement(481546..482841)
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AA seq
431 aa
AA seq
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MSSMSFEQLELDPILVRALARMGYARPTTIQSQVIPEAMNGRDIMASAPTGTGKTAAFLL
PVCQHLLDFPRRQAGPARALILTPTRELAKQIADDAKALLKDTGLRVETITGGVDSEKHL
PALTKTTDIVVATPGRLLQYIEEESFDSRDIEILILDEADRMLDMGFIGDVDRIAAEARW
RRQTMLFSATLEGRGLMKFAADILKEPVELSAEPPRSERKKINQWLHLADNPEHKFALLV
HLLRQPDVTRSIVFVKTRERLMELASRLQQEGLDNAWLRGEMDQDKRFEALRRFRNGKVN
ILVATDVAARGIDLPEVSHVINFDMPRTADVYVHRIGRTGRAGRKGTAISLVEAHDMPMV
VKVERYTDQKLKRRIIDELRPRHKEASVAPRKKKEADSKVKKAEQPKQKKRLRDQKAKGK
PKWAREKKADQ
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtatgagcttcgagcaactggaactggatcccattctggtccgcgccctggca
cgcatgggctatgccagacccaccaccattcagagccaggtcatccccgaagccatgaac
ggacgggacatcatggcctcggcccccaccggcaccggcaagaccgccgccttcctgttg
ccggtctgccagcacctgctggattttccccgtcgccaggccggcccggcccgggccctg
atcctcacccccacccgcgagctggccaagcagatcgccgacgacgccaaggccctgctc
aaggacaccggcctgcgggtcgagaccatcaccggcggggtggacagcgaaaagcacctg
cccgccctgaccaagaccaccgacatagtggtggccaccccgggccggctgctgcaatac
atagaagaagagtccttcgacagccgggacatcgagatcctgatcctggacgaggcggat
cgcatgctcgacatgggctttatcggggatgtggaccgcatcgccgccgaggcccgctgg
cgccgccagaccatgctgttttccgccaccctggaaggccgtggcctgatgaagttcgcc
gccgacatcctcaaggagccggtggagctgtccgccgagccgccgcgcagcgaacgcaag
aagatcaaccagtggctgcacctggcggacaaccccgagcacaagttcgccctgctggtc
cacctgctgcgccagccggacgtgacccgcagcatcgtcttcgtgaaaacccgggagcgg
ttgatggagctggccagccggctgcaacaggaagggctggacaacgcctggctacgcggc
gaaatggatcaggacaagcgcttcgaggcgctgcgccgctttcgcaacggcaaggtcaat
atcctggtggccaccgacgtggcggcccggggcatcgatctgcccgaggtcagccacgtg
atcaactttgacatgccgcgcaccgccgacgtctatgtgcaccgcatcggccgcaccggc
cgggccggccgcaagggcaccgccatcagcctggtggaagcccacgacatgccgatggtg
gtgaaagtggagcgctacaccgaccagaagctcaagcgccggatcatcgacgagctgcgc
cccaggcacaaggaagccagcgtggcgccgcgcaagaaaaaagaagccgacagcaaggtg
aaaaaggccgagcaacccaagcagaagaaacggctgcgggatcagaaggccaagggcaaa
cccaagtgggcgagggagaaaaaagccgaccagtaa
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