Zobellella denitrificans: AN401_03565
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Entry
AN401_03565 CDS
T05100
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
zdf
Zobellella denitrificans
Pathway
zdf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zdf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AN401_03565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zdf03019
]
AN401_03565
03009 Ribosome biogenesis [BR:
zdf03009
]
AN401_03565
Messenger RNA biogenesis [BR:
zdf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AN401_03565
Ribosome biogenesis [BR:
zdf03009
]
Eukaryotic type
Pre-60S particles
RNases
AN401_03565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ATG73048
UniProt:
A0A231MX23
LinkDB
All DBs
Position
759492..760037
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AA seq
181 aa
AA seq
DB search
MSQNAENLVWIDLEMTGLEPDEHRIIEIASIVTDKELKVLAEGPVLAIHQPEAELAKMDE
WNVRTHTGSGLVARVQASTVTEAEAVAQTLAFLRQWVPEKTSPLCGNSIGQDRRFLARHM
PELEAFFHYRNIDVSTVKELVRRWQPALLEQFTKKGSHQALDDIRESIAELQFYREKVFT
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaatgcagaaaacctggtctggatcgatctggagatgaccggcctggagccg
gacgaacacaggattatcgagattgccagcatcgtcaccgacaaggagctgaaggtgctg
gccgagggaccggtgctggccatccatcagccggaggcggagctggccaagatggacgag
tggaatgtgcgcacccacaccggctcgggcctggtggcgcgggtgcaggccagcaccgtg
accgaggcggaggcggtggcgcagacgctggcgtttctgcgccagtgggtgccggaaaag
acctcgcccctgtgcggcaactccatcggccaggaccggcgcttcctggcccgccacatg
ccggagctggaagccttcttccattaccgcaatattgacgtcagcaccgtcaaggagctg
gtgcgccgctggcagccggcgctgctggaacagttcaccaagaagggcagccaccaggcc
ctggacgatatccgtgagtccatcgccgaactgcagttttaccgggagaaagtgttcacg
atctga
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