Zobellella denitrificans: AN401_03795
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Entry
AN401_03795 CDS
T05100
Name
(GenBank) cell wall degradation protein
KO
K21470
L,D-transpeptidase YcbB
Organism
zdf
Zobellella denitrificans
Brite
KEGG Orthology (KO) [BR:
zdf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zdf01002
]
AN401_03795
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
zdf01011
]
AN401_03795
Peptidases and inhibitors [BR:
zdf01002
]
Cysteine peptidases
Family C82
AN401_03795
Peptidoglycan biosynthesis and degradation proteins [BR:
zdf01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
AN401_03795
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
GDE_N_bis
Motif
Other DBs
NCBI-ProteinID:
ATG73083
UniProt:
A0A291HLS0
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Position
806832..808340
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AA seq
502 aa
AA seq
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MKRCRTATWLWLLLCLSLGATASSWRDEPEARLQLHRLGLELALADVHPELTLWWRQAVS
TASDEADDRLLLGLSAFWRQWSGLSFVDRQHLRIPQSGLMPSAEDDAALRQAAQNGSRHQ
LVQRLVPGYGDHDQLQRQLARLLALAEQPWPSLKTATLRPGERAAVVPRLRERLQLLGDL
PASAMDGDDYYDSALEQGVRHFQQRHGLQVDGVIGPHTYSWLDVSPLARAQLLMRSMLRT
LIGDTLPPAYLLVNIPEYRLRLYQDQAMVLESDVIVGKDSRKTPIMASEITNVVVNPPWH
VPRSILTKDILPRLYQDPGYIEREEFEVLDAGERLVPREEWQAVLYEDGVFPYRLRQRPG
SRNALGAYKFHLPNNEAIYLHDTPSRGLFSRDSRALSSGCVRVEEAEQLALWLLSEQWSP
SRLADLKANRHTRWLRVNKPLPVFMVYWPGWLGQDGLPRFRDDIYQFDHRLRAPFEAGQL
DLGLLGIEQGRLSQLSRLAHTL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggtgccgaacagcaacctggctgtggctgttactctgtctgagcctgggggcc
acggcctcgtcctggcgggatgagcccgaggcccggttgcaactgcaccggctggggctg
gaactggccctggcggacgtgcacccggagctgaccctgtggtggcggcaggcggtgtcg
actgcctctgatgaggccgatgaccggctgctgctggggctgagtgctttctggcggcag
tggtccggcctgtctttcgtcgatcgccagcatctgcgtatcccccaatccggcctgatg
cccagtgcggaggacgacgcggcactgcggcaggcggcccaaaacggcagccgccatcaa
ctggtgcaacgtctggtgcccggttatggggatcatgatcagttgcagcggcaactggcg
cggttgctggccctggccgagcaaccctggcccagtctcaaaacggccacgctccggccc
ggcgagcgggcggccgtggtgccccggctgcgggaacggttgcaactgctgggggacctg
cccgcgagcgcaatggatggcgatgactattacgacagtgccctcgagcagggcgtacga
cactttcagcaacgtcacggcctgcaggtggatggggtcatcgggccccatacctattcc
tggctggatgtgtcccccctggcccgggcccagctgttgatgcgcagcatgctgcgcacc
ctgatcggcgataccctgcccccggcctacctgctggtgaatattcccgagtaccggctg
cgtctctatcaggatcaggccatggtgctggaaagcgacgtgatcgtgggcaaggacagc
cgcaagaccccgatcatggccagcgagatcaccaatgtggtggtcaatcctccctggcat
gtgccgcgttccatcctcaccaaggacatactgccccggctgtaccaggatcccggctat
atcgagcgcgaggaattcgaggtgctggacgccggcgagcggctggtgccccgggaggaa
tggcaggcggtgctctacgaagacggggttttcccctatcggctgcggcagcgacccggc
agccgcaatgccctgggggcctacaagttccatctgcccaacaacgaggccatctacctg
cacgatacgccctcccgcgggctgttcagccgggacagccgggcgctgagctcgggctgt
gtgcgggtggaggaggccgagcaactggcactctggctgctcagcgagcagtggagcccg
tcccggctggcggatctgaaggccaaccggcacacccgctggctccgggtcaacaagccg
ttgccggtgttcatggtgtactggcccggctggctgggacaggacggcctgccccgtttt
cgtgatgacatctaccagttcgaccaccgcctccgtgcgccctttgaggcgggtcagctc
gatctggggctgcttggcatagaacagggacggttgtcacaactttcccgtctggcgcac
acattgtaa
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