Zobellella denitrificans: AN401_05195
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Entry
AN401_05195 CDS
T05100
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
zdf
Zobellella denitrificans
Pathway
zdf00220
Arginine biosynthesis
zdf00240
Pyrimidine metabolism
zdf00250
Alanine, aspartate and glutamate metabolism
zdf01100
Metabolic pathways
zdf01110
Biosynthesis of secondary metabolites
zdf01240
Biosynthesis of cofactors
Module
zdf_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
zdf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
AN401_05195 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
AN401_05195 (carB)
00220 Arginine biosynthesis
AN401_05195 (carB)
Enzymes [BR:
zdf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
AN401_05195 (carB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp_3
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
GARS_A
RimK
CoA_binding_2
ATP-grasp_5
HTH_17
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
ATG73332
UniProt:
A0A231N5B6
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All DBs
Position
1085023..1088250
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AA seq
1075 aa
AA seq
DB search
MPKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRRIIEKERPDAVLPTMGGQTALNCALELEKHGVLAEFGVEMIGATA
DAIDKAEDRYRFDQAMKSIGLECPRAGIAHNMEEAYGVLDQVGFPCIIRPSFTMGGTGGG
IAYNREEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDRNDNCIIVCAIENFDAM
GVHTGDSITVAPAQTLTDKEYQLMRNASMAVLREIGVETGGSNVQFGINPKDGRMVIIEM
NPRVSRSSALASKATGFPIAKVAAKLAIGYTLDELQNDITGGLTPASFEPAIDYVVTKVP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRNFQESVQKALRGLETGMHGFDPIVDLNDPES
LARIRHELQEPGAERIWYIADAFRAGMSVDGVFKLTNVDRWFLVQIEELIKLEEQVKEGG
FAGLTPEFLRALKRKGFADARLGKLLGVSEGEVRKLRHRHEIFPVYKRVDTCAAEFATNT
AYMYSSYDEECEANPTDKDKIIVLGGGPNRIGQGIEFDYCCVHAALALREDGFETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLKLARALEAAGVPV
IGTSPDAIDRAEDRERFQQAVERLGLKQPQNATVTALEQAVSLAEKIGYPLVVRPSYVLG
GRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDIDAICDGKDVVIGGIMEH
IEQAGVHSGDSGCSLPPYTLSKAIQDEMREQVRKLALELGVVGLMNVQFAVKGNDIYLIE
VNPRAARTVPFVSKATGVPLAKVAARVMAGRSLAEQGVTKEIIPPYYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGETFAEAFGKAHLGAGKAVPKEGRALLSVRHSDKQRVVDLA
ASLLEAGYQLDATHGTAVVLGEANINPRLVNKVHEGRPHILDRIKNNEYSYIVNTAEGRQ
AIEDSRQLRRGALSQKVSYTTTLNGAFATVMAMAHDATASVISVQEMHERVANGK
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagacatacagagcattctgatcctgggcgctggccccatcgtgatc
ggtcaggcctgtgaattcgactactccggcgcccaggcctgcaaggccctgcgggaagaa
ggctaccgcgtcatcctggtcaactccaacccggccaccatcatgaccgatccggagatg
gccgacgccacctacatcgaacccatccactgggaagtggtgcgtcgcatcatcgagaag
gagcgccccgacgcggtgctgcccaccatgggtggccagaccgcgctcaactgcgccctg
gagctggaaaagcacggcgtactggccgagttcggagtggagatgatcggcgccaccgcc
gacgccatcgacaaggcggaagaccgttaccgcttcgatcaggcgatgaagagcatcggc
ctggagtgcccccgcgccggcatcgcccacaacatggaagaagcctacggggtgctggat
caggtgggcttcccctgcatcatccgccccagcttcaccatgggcggtaccggcggcggt
atcgcctacaaccgggaagagttcgaggagatctgtacccgcggcctggatctgtcgccc
accaatgagctgctcatcgacgagtccctgatcggctggaaagagtacgagatggaagtg
gtgcgggatcgcaacgacaactgcatcatcgtctgcgccatcgagaacttcgacgccatg
ggcgtgcacaccggcgactccatcaccgttgcgccggcccagaccctgaccgacaaggaa
taccagctgatgcgcaacgcctccatggcggtattgcgcgagatcggggtggaaaccggc
ggctccaacgtccagttcggcatcaatcccaaggatggccgcatggtcatcatcgagatg
aacccgcgggtgtcccgctcctccgccctggcctccaaggccaccggcttccccatcgcc
aaggtggcggccaagctggccatcggctacaccctggacgagctgcagaacgacatcacc
ggcggcctgaccccggcttcgttcgagccggccatcgactacgtggtcaccaaggtgccg
cgcttcaacttcgagaagttcgccggcgccaacgaccgcctgaccacccagatgaagtcg
gtgggcgaggtgatggccatcggccgcaacttccaggagtcggtgcagaaagccctgcgt
ggcctggagaccggcatgcacggtttcgatcccatcgtcgacctgaacgatcccgagagc
ctggcccgcatccgccacgagctgcaggagcccggcgccgagcggatctggtacatcgcc
gatgccttccgggccggcatgagcgtggacggcgtgttcaagctgaccaatgtcgaccgc
tggttcctggtgcagatcgaagagctgatcaagctggaagagcaggtcaaggaaggcggg
tttgccggcctgacccccgaattcctgcgggcgctcaagcgcaagggctttgccgatgcg
cgtctgggcaagctgctgggcgtgagcgagggcgaggtgcgcaagctgcgccaccgccac
gagatcttcccggtgtacaagcgggtggacacctgcgccgccgagttcgccaccaatacc
gcctacatgtactccagttacgacgaggagtgcgaggccaaccccaccgacaaggacaag
atcatcgtcctggggggcggccccaaccgcatcggccagggcatcgagttcgactactgc
tgcgtgcacgcggccctggccctgcgcgaggacgggttcgagaccatcatggtcaactgc
aacccggaaaccgtgtccaccgactacgacacctctgaccgcctctacttcgagccagtg
accctggaggacgtgctggaaatcgtgcgggtcgagcagcccaagggcgtgatcgtccag
tatggcggccagaccccgctgaaactggcccgcgccctggaagccgccggtgtgccggtg
atcggcaccagcccggacgccatcgaccgggccgaggaccgggaacggttccagcaggcg
gtggagcgtctgggcctcaagcagccccagaacgccaccgtgaccgccctggagcaggcc
gtgtccctggccgagaaaatcggctacccgctggtggtgcgcccctcttacgtgctgggc
ggccgggccatggaaatcgtctacgacgagcaggatctgcgccgttacttcaacgaggcg
gtgagtgtgtccaacgagtcgccggtgctgctggatcgcttcctggatgatgccaccgag
gtggacatcgacgccatctgcgacggcaaggacgtggtcatcggcggcatcatggagcac
atcgaacaggccggcgtgcactccggcgactccggctgctccctaccgccctacaccctc
tccaaggcgatccaggacgagatgcgcgaacaggtgcgcaagctggccctggagctgggg
gtggtcggcctgatgaacgtgcagttcgcggtcaagggcaacgacatctacctcatcgag
gtgaacccgcgcgcggcccgtaccgtgcccttcgtgtccaaggccaccggtgtgccgctg
gccaaggtggcggcccgggtgatggccggcaggtccctggccgagcagggcgtgaccaaa
gagatcatcccgccctactactcggtcaaggaagtggtgctgccgttcaacaagttcccg
ggcgtggatccgctgctggggccggaaatgcgctccaccggcgaggtgatgggcgtgggc
gagaccttcgccgaggccttcggcaaggcccatctgggcgccggcaaggcggtgccgaag
gaaggccgcgccctgctgtcggttcgccacagcgataagcagcgggtggtcgacctggcc
gccagcctgctggaagccggctaccagctggacgccacccacggcaccgccgtggtgctg
ggcgaagccaacatcaacccgcggctggtgaacaaggtgcatgaaggtcgtccgcacatt
ctggatcggatcaagaacaacgagtacagctatatcgtgaacaccgccgagggccgccag
gccatcgaggattctcgccagctgcgccggggtgccctgagccagaaggtgtcctacacc
accaccctgaacggggccttcgccaccgtcatggccatggcccacgacgccaccgcctcg
gtgatttcggttcaggaaatgcacgagcgggtggccaacggcaagtaa
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