Zobellella denitrificans: AN401_05195
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Entry
AN401_05195 CDS
T05100
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
zdf
Zobellella denitrificans
Pathway
zdf00240
Pyrimidine metabolism
zdf00250
Alanine, aspartate and glutamate metabolism
zdf01100
Metabolic pathways
zdf01240
Biosynthesis of cofactors
Module
zdf_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
zdf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
AN401_05195 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
AN401_05195 (carB)
Enzymes [BR:
zdf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
AN401_05195 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp_3
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
GARS_A
RimK
CoA_binding_2
ATP-grasp_5
HTH_17
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
ATG73332
UniProt:
A0A231N5B6
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All DBs
Position
1085023..1088250
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AA seq
1075 aa
AA seq
DB search
MPKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRRIIEKERPDAVLPTMGGQTALNCALELEKHGVLAEFGVEMIGATA
DAIDKAEDRYRFDQAMKSIGLECPRAGIAHNMEEAYGVLDQVGFPCIIRPSFTMGGTGGG
IAYNREEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDRNDNCIIVCAIENFDAM
GVHTGDSITVAPAQTLTDKEYQLMRNASMAVLREIGVETGGSNVQFGINPKDGRMVIIEM
NPRVSRSSALASKATGFPIAKVAAKLAIGYTLDELQNDITGGLTPASFEPAIDYVVTKVP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRNFQESVQKALRGLETGMHGFDPIVDLNDPES
LARIRHELQEPGAERIWYIADAFRAGMSVDGVFKLTNVDRWFLVQIEELIKLEEQVKEGG
FAGLTPEFLRALKRKGFADARLGKLLGVSEGEVRKLRHRHEIFPVYKRVDTCAAEFATNT
AYMYSSYDEECEANPTDKDKIIVLGGGPNRIGQGIEFDYCCVHAALALREDGFETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLKLARALEAAGVPV
IGTSPDAIDRAEDRERFQQAVERLGLKQPQNATVTALEQAVSLAEKIGYPLVVRPSYVLG
GRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDIDAICDGKDVVIGGIMEH
IEQAGVHSGDSGCSLPPYTLSKAIQDEMREQVRKLALELGVVGLMNVQFAVKGNDIYLIE
VNPRAARTVPFVSKATGVPLAKVAARVMAGRSLAEQGVTKEIIPPYYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGETFAEAFGKAHLGAGKAVPKEGRALLSVRHSDKQRVVDLA
ASLLEAGYQLDATHGTAVVLGEANINPRLVNKVHEGRPHILDRIKNNEYSYIVNTAEGRQ
AIEDSRQLRRGALSQKVSYTTTLNGAFATVMAMAHDATASVISVQEMHERVANGK
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagacatacagagcattctgatcctgggcgctggccccatcgtgatc
ggtcaggcctgtgaattcgactactccggcgcccaggcctgcaaggccctgcgggaagaa
ggctaccgcgtcatcctggtcaactccaacccggccaccatcatgaccgatccggagatg
gccgacgccacctacatcgaacccatccactgggaagtggtgcgtcgcatcatcgagaag
gagcgccccgacgcggtgctgcccaccatgggtggccagaccgcgctcaactgcgccctg
gagctggaaaagcacggcgtactggccgagttcggagtggagatgatcggcgccaccgcc
gacgccatcgacaaggcggaagaccgttaccgcttcgatcaggcgatgaagagcatcggc
ctggagtgcccccgcgccggcatcgcccacaacatggaagaagcctacggggtgctggat
caggtgggcttcccctgcatcatccgccccagcttcaccatgggcggtaccggcggcggt
atcgcctacaaccgggaagagttcgaggagatctgtacccgcggcctggatctgtcgccc
accaatgagctgctcatcgacgagtccctgatcggctggaaagagtacgagatggaagtg
gtgcgggatcgcaacgacaactgcatcatcgtctgcgccatcgagaacttcgacgccatg
ggcgtgcacaccggcgactccatcaccgttgcgccggcccagaccctgaccgacaaggaa
taccagctgatgcgcaacgcctccatggcggtattgcgcgagatcggggtggaaaccggc
ggctccaacgtccagttcggcatcaatcccaaggatggccgcatggtcatcatcgagatg
aacccgcgggtgtcccgctcctccgccctggcctccaaggccaccggcttccccatcgcc
aaggtggcggccaagctggccatcggctacaccctggacgagctgcagaacgacatcacc
ggcggcctgaccccggcttcgttcgagccggccatcgactacgtggtcaccaaggtgccg
cgcttcaacttcgagaagttcgccggcgccaacgaccgcctgaccacccagatgaagtcg
gtgggcgaggtgatggccatcggccgcaacttccaggagtcggtgcagaaagccctgcgt
ggcctggagaccggcatgcacggtttcgatcccatcgtcgacctgaacgatcccgagagc
ctggcccgcatccgccacgagctgcaggagcccggcgccgagcggatctggtacatcgcc
gatgccttccgggccggcatgagcgtggacggcgtgttcaagctgaccaatgtcgaccgc
tggttcctggtgcagatcgaagagctgatcaagctggaagagcaggtcaaggaaggcggg
tttgccggcctgacccccgaattcctgcgggcgctcaagcgcaagggctttgccgatgcg
cgtctgggcaagctgctgggcgtgagcgagggcgaggtgcgcaagctgcgccaccgccac
gagatcttcccggtgtacaagcgggtggacacctgcgccgccgagttcgccaccaatacc
gcctacatgtactccagttacgacgaggagtgcgaggccaaccccaccgacaaggacaag
atcatcgtcctggggggcggccccaaccgcatcggccagggcatcgagttcgactactgc
tgcgtgcacgcggccctggccctgcgcgaggacgggttcgagaccatcatggtcaactgc
aacccggaaaccgtgtccaccgactacgacacctctgaccgcctctacttcgagccagtg
accctggaggacgtgctggaaatcgtgcgggtcgagcagcccaagggcgtgatcgtccag
tatggcggccagaccccgctgaaactggcccgcgccctggaagccgccggtgtgccggtg
atcggcaccagcccggacgccatcgaccgggccgaggaccgggaacggttccagcaggcg
gtggagcgtctgggcctcaagcagccccagaacgccaccgtgaccgccctggagcaggcc
gtgtccctggccgagaaaatcggctacccgctggtggtgcgcccctcttacgtgctgggc
ggccgggccatggaaatcgtctacgacgagcaggatctgcgccgttacttcaacgaggcg
gtgagtgtgtccaacgagtcgccggtgctgctggatcgcttcctggatgatgccaccgag
gtggacatcgacgccatctgcgacggcaaggacgtggtcatcggcggcatcatggagcac
atcgaacaggccggcgtgcactccggcgactccggctgctccctaccgccctacaccctc
tccaaggcgatccaggacgagatgcgcgaacaggtgcgcaagctggccctggagctgggg
gtggtcggcctgatgaacgtgcagttcgcggtcaagggcaacgacatctacctcatcgag
gtgaacccgcgcgcggcccgtaccgtgcccttcgtgtccaaggccaccggtgtgccgctg
gccaaggtggcggcccgggtgatggccggcaggtccctggccgagcagggcgtgaccaaa
gagatcatcccgccctactactcggtcaaggaagtggtgctgccgttcaacaagttcccg
ggcgtggatccgctgctggggccggaaatgcgctccaccggcgaggtgatgggcgtgggc
gagaccttcgccgaggccttcggcaaggcccatctgggcgccggcaaggcggtgccgaag
gaaggccgcgccctgctgtcggttcgccacagcgataagcagcgggtggtcgacctggcc
gccagcctgctggaagccggctaccagctggacgccacccacggcaccgccgtggtgctg
ggcgaagccaacatcaacccgcggctggtgaacaaggtgcatgaaggtcgtccgcacatt
ctggatcggatcaagaacaacgagtacagctatatcgtgaacaccgccgagggccgccag
gccatcgaggattctcgccagctgcgccggggtgccctgagccagaaggtgtcctacacc
accaccctgaacggggccttcgccaccgtcatggccatggcccacgacgccaccgcctcg
gtgatttcggttcaggaaatgcacgagcgggtggccaacggcaagtaa
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