Zobellella denitrificans: AN401_09445
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Entry
AN401_09445 CDS
T05100
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
zdf
Zobellella denitrificans
Brite
KEGG Orthology (KO) [BR:
zdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zdf03016
]
AN401_09445
Enzymes [BR:
zdf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AN401_09445
Transfer RNA biogenesis [BR:
zdf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AN401_09445
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
ATG74049
UniProt:
A0A291HPL2
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All DBs
Position
complement(2020998..2022095)
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AA seq
365 aa
AA seq
DB search
MTYTVITDNQTLADFCATDATLLAVDTEFVRTRTFYAKPGLYQLHDGRRTALIDPLAVAD
LSPLWRLLHDPGRICLLHAGGEDLELFQHQSGALPARVHDTQLAAAFLGLGAQLGFAALV
EQLLGVSLDKAHARTDWLARPLSAEQLRYAADDVIYLYPLYERLWQQLEQKGFTAWFEQE
CEWTVKRRSVSTPPELAYLDIKNAWTLDRQALGVLQRLCQWRLLEARRRDLAVNFVVKEA
HLVQVAERAPRSLSDLNRLGLEPMEIKRHGDTLLALVQEALASPDSWPEPVRRLVDYPGY
KGELKRIKGLVEQAGEDAGVPAELIASKRLIHQYLSWKWRLEEAEDVTPALLQGWRGELL
GARLR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgacctatacagtgatcaccgataaccagaccctggccgacttctgcgccaccgacgcc
accctgctggcggtggataccgagttcgtccgtacccgtaccttctacgccaagcccggc
ctctaccagttgcacgatggtcgccgcaccgccctgatcgacccgctggcggtggccgac
ctctcgcccttgtggcggctgctgcacgatccgggccggatctgcctgctgcacgccggc
ggcgaggatctggagctgttccagcaccagagtggcgccctgccggcccgggtgcacgat
acccagctggcggcggccttcctcggactcggtgcccagctcggttttgccgccctggtc
gagcagttgctgggtgtcagcctggacaaggcccatgcccgcaccgactggctggcccgt
cccctgtcggccgagcaattgcgctacgccgccgacgatgtcatctacctctatccgctg
tacgaacggctgtggcagcagcttgagcagaaaggctttaccgcctggttcgagcaggaa
tgcgagtggacggtgaagcgacgcagcgtcagcaccccgccggagctggcctacctggac
atcaagaatgcctggaccctggaccggcaggccctgggcgtactgcagcgcctttgccag
tggcggctgctcgaggcccggcggcgggatctggcggtgaacttcgtggtcaaggaggcc
cacctggtgcaggtggctgagcgggcgccgcgttccctgtccgatctcaaccggctggga
ctggagccgatggagatcaagcgtcacggcgataccctgctggcgctggtgcaggaagcg
ctggccagccccgacagctggcccgagccggtcaggcggctggtggattatccggggtac
aagggcgaactcaagcgcatcaagggactggtcgagcaggcgggggaagatgccggcgtg
ccggcggagctgattgcgtccaagcggctgatccaccagtacctgagctggaagtggcgg
ctggaagaagccgaagacgtcaccccggcactgttgcagggctggcgcggcgagctgctg
ggcgcccggctccggtag
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