Zobellella denitrificans: AN401_10780
Help
Entry
AN401_10780 CDS
T05100
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
zdf
Zobellella denitrificans
Pathway
zdf00260
Glycine, serine and threonine metabolism
zdf00460
Cyanoamino acid metabolism
zdf00630
Glyoxylate and dicarboxylate metabolism
zdf00670
One carbon pool by folate
zdf00680
Methane metabolism
zdf01100
Metabolic pathways
zdf01110
Biosynthesis of secondary metabolites
zdf01120
Microbial metabolism in diverse environments
zdf01200
Carbon metabolism
zdf01230
Biosynthesis of amino acids
zdf01240
Biosynthesis of cofactors
zdf04981
Folate transport and metabolism
Module
zdf_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
zdf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AN401_10780 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AN401_10780 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AN401_10780 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AN401_10780 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AN401_10780 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AN401_10780 (glyA)
Enzymes [BR:
zdf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AN401_10780 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ATG74284
UniProt:
A0A291HQ70
LinkDB
All DBs
Position
complement(2329229..2330482)
Genome browser
AA seq
417 aa
AA seq
DB search
MFSKHTRIQDMDPALWAAMEEEAARQEQHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEAVDKVEQLAIDRAKELFGADYANVQPHSGSQANAAVYMALCAPGDTVLGMS
LAHGGHLTHGAKVSFSGKIYNAVQYGLNEATGEVDYDQVEALALEHEPKMIVAGFSAYSR
VMDWARFRAIADKVGAYLFVDMAHVAGLVAAGCYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKANPEIEKKLNAAVFPGGQGGPLMHAIAAKAVAFAEALTPEFRDYQQAVVDNARAMVE
VFKSRGFNVVSNGTDNHLFLLDLSAKGITGKDADRVLGEAHITVNKNAVPNDPQPPFVTS
GLRIGTPAVTSRGFKVEHCRQLAGWICDILDNMDDPEVIIAVKDQVASLCSYFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaaacacacccgcattcaggatatggacccggcactgtgggccgccatggaa
gaggaggccgcccgccaggagcagcatatcgagctgattgcctcggagaactacaccagc
ccggcggtgatggaagcgcaagggtccgtgctcaccaacaagtatgcggaaggctacccc
ggcaagcgctactacggcggttgcgaggcggtggacaaggtggagcagctggccatcgat
cgtgccaaggagctgttcggcgccgactacgccaacgtccagccccactccggctcccag
gccaacgccgccgtctacatggccctgtgcgcccccggcgacaccgtgctcggcatgagc
ctggcccacggcggccacctcacccacggcgccaaggtcagcttttccggcaagatctac
aacgcggtgcaatacggcctgaacgaggccaccggcgaggtggactacgaccaggtcgag
gccctggccctggagcacgagcccaagatgatcgtggccggcttctccgcctattcccgg
gtgatggactgggcccgtttccgcgccatcgccgacaaggtgggcgcctacctgttcgtg
gacatggcccacgtggccggcctggtggccgcgggctgctatcccaacccgctgccctac
gcggacgtggtcaccaccaccacccacaagaccctgcgcggtccccgtggtggcctgatc
ctggccaaggccaatccggagatcgagaaaaaactcaacgccgccgtcttccccggtggc
cagggcggcccgctgatgcacgccatcgccgccaaggcggtggcctttgccgaggcgctc
accccggaattccgtgactaccagcaggcggtggtggacaacgcccgcgccatggtggag
gtgttcaagagccgcggcttcaatgtggtgtcgaacggtaccgataatcacctgttcctg
ctcgacttgtccgccaagggcatcaccggcaaggacgcggatcgggtgctgggcgaggcg
cacatcaccgtcaacaagaacgcggtgccgaacgatccccagccgcccttcgtgacctcg
ggcctgcgcatcggcaccccggcggtgaccagccgcggcttcaaggtggagcactgccgc
cagctggcgggctggatctgcgacattctcgacaacatggacgacccggaagtgattatc
gcggtgaaggaccaggtggccagcctgtgcagctacttcccggtatatcgctaa
DBGET
integrated database retrieval system