Zobellella denitrificans: AN401_15685
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Entry
AN401_15685 CDS
T05100
Name
(GenBank) pseudouridine synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
zdf
Zobellella denitrificans
Brite
KEGG Orthology (KO) [BR:
zdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zdf03016
]
AN401_15685
Enzymes [BR:
zdf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
AN401_15685
Transfer RNA biogenesis [BR:
zdf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AN401_15685
Prokaryotic type
AN401_15685
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ATG75120
UniProt:
A0A231MWK3
LinkDB
All DBs
Position
complement(3370984..3372027)
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AA seq
347 aa
AA seq
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MSNNWHYLHGQPEVSGCLKAAPEDFVVREDLGFSPSGEGEHILLHVRKRGQNTQWVAREL
ARLAGVAQRDVTWAGLKDRHAVTEQWFGVHLPGKEMPDFSPLENEDVQILAIARHHKKLK
TGALRGNRFELALTGLEGEGDLDARLAAIAARGVPNYYGDQRFGRDYGNLEQAKAMFAGR
RIKDRNKRSLYLSAARSYLFNLAASHRLAAGLGEQLLAGDCVMLAGSQSFFTLGEDNPLD
EAMAARFASGDIRLSAPLWGRGRLPSQDEAAALEQAALVGQEALCAGLEANGLKQERRAL
LLRPEELAWQREGDRLRLSFWLPAGSYATSLVRELIKDKENHEDTGE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataactggcattatctgcacggccaaccggaagtcagcggttgcctgaaggcc
gcgcccgaagacttcgtggtgcgggaggatctgggtttttcccccagcggcgagggcgag
catatcctgctgcatgtgcgcaagcgcggccagaacacccagtgggtggcccgggaactg
gcccggctggcgggcgtggcccagcgcgacgtgacctgggccgggctcaaggacaggcac
gcggtcaccgagcagtggttcggggtgcacctgccgggcaaggagatgcccgatttctcg
cccctggaaaacgaggatgtgcagatcctggccatcgcccgccaccacaagaagctgaag
accggcgccctcaggggcaaccgcttcgaactggccctcaccgggctggagggcgaaggc
gatctggatgcccgtctggccgccatcgccgcccggggggtgcccaactactacggcgac
cagcgtttcggccgggattacggcaacctggagcaggcgaaagccatgttcgccgggcgg
cgcatcaaggatcgcaacaagcgctccctgtacctgtcggcggcgcgcagctacctgttc
aacctggcggcgagccaccggctggcggcagggctgggcgagcagttgctggccggtgac
tgcgtgatgctggccggcagccagtccttctttaccctgggcgaggacaaccccctcgac
gaggccatggcggcgcgcttcgccagtggcgatatccgcctgagtgcgcccctgtggggg
cggggccggctgccgagccaggatgaggccgccgccctggagcaggcggccctggtgggg
caggaggcgctgtgcgccgggctcgaggccaacggcctcaagcaggagcggcgggcgctg
ctgctcaggcccgaggaactggcctggcaacgggagggcgaccgcctgcggctgtcgttc
tggctgccggcgggcagctatgccaccagcctggtacgggaactgatcaaggacaaggaa
aaccatgaagatactggtgagtaa
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