Zobellella denitrificans: AN401_18815
Help
Entry
AN401_18815 CDS
T05100
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
zdf
Zobellella denitrificans
Pathway
zdf00300
Lysine biosynthesis
zdf00470
D-Amino acid metabolism
zdf01100
Metabolic pathways
zdf01110
Biosynthesis of secondary metabolites
zdf01120
Microbial metabolism in diverse environments
zdf01230
Biosynthesis of amino acids
Module
zdf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
zdf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AN401_18815
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AN401_18815
Enzymes [BR:
zdf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AN401_18815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
ATG75648
UniProt:
A0A231MZJ4
LinkDB
All DBs
Position
complement(4037579..4038835)
Genome browser
AA seq
418 aa
AA seq
DB search
MDYFNYQDDGRLYGEACDLTRLAEQHGTPLYVYSRATLERHWKAFDQAAGEVDHLICYAV
KANSNLAVLNVLARLGSGFDIVSKGELCRVIAAGGDPRKVVFSGVGKRVDEIRFALEQQI
FCFNVESVAELERINSVAGEMGVKAPVSIRVNPDIDAGTHPYISTGLKENKFGIPIEQAR
DIYRQAAALPHLAVNGVDCHIGSQLTELAPFLEAVDKLLVLIDGLAEDGIHIHHLDVGGG
LGVRYDQEAPPEPSRYAEQLKARLQDRNLTLVFEPGRAIAANAGVLLTRVEHLKPGEAKN
FAIVDAAMNDLIRPALYSAWQAIIPVDSTLQREPAVYDVVGPVCETGDFIGKDRTLAITE
GDLLAVRSAGAYGFVMASNYNSRPRAAEVMVDGDQAYVVREREQLTELWRGESLLPGA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
ttggattactttaattatcaggacgatggccgcctctacggcgaggcctgcgatctcacc
cgcctggccgaacagcacggcacccccctctacgtctattcccgcgccaccctggagcgc
cactggaaggccttcgaccaggccgccggcgaggtggaccacctgatctgctacgcggtc
aaggccaattccaacctggcggtgctgaacgtgctggcgcggctgggttcgggcttcgat
atcgtctccaagggtgaactgtgccgggtgatcgccgccggcggcgatccgcgcaaggtg
gtgttttccggcgtgggcaagcgggtcgacgaaatccgcttcgccctggagcagcagatc
ttctgcttcaacgtggaatcggtggccgaactggagcgcatcaacagcgtggcgggcgag
atgggcgtcaaggcaccggtgtccatccgggtcaacccggacatcgacgccggcacccat
ccctatatctccaccggcctgaaagagaacaagttcggcattcccatcgagcaggccagg
gacatctaccgccaggcggcggccctgccccacctcgcggtcaacggcgtggactgccat
atcggctcccagctgaccgagctggcgcccttcctcgaggcggtggacaagctgctggtg
ctgatcgacggcctggccgaggacggcatccacatccatcacctggacgtgggtggcggc
ctgggcgtgcgctacgaccaggaagcgccgcccgagcccagccgctacgccgagcagctc
aaggcccgcctgcaggaccgcaacctgaccctggtattcgagccgggccgcgccatcgcc
gccaacgctggcgtgctgctgacccgggtggagcacctcaagccgggcgaggccaagaat
ttcgccatcgtcgacgccgccatgaacgacctgatccgcccggccctgtacagcgcctgg
caggccatcatacctgtggattccaccctgcagcgggagccggcggtctacgacgtggtg
ggcccggtgtgcgaaaccggcgactttatcggcaaggaccgtaccctggccatcaccgag
ggcgacctgctggcggtgcgttccgccggcgcctatggttttgtgatggcctccaactac
aacagccggccccgggccgccgaggtgatggtggacggggaccaggcctatgtggtgcgc
gagcgggaacaactgaccgagctgtggcggggcgagagcctgctgcccggcgcataa
DBGET
integrated database retrieval system