Zobellella denitrificans: AN401_19325
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Entry
AN401_19325 CDS
T05100
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
zdf
Zobellella denitrificans
Brite
KEGG Orthology (KO) [BR:
zdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zdf03016
]
AN401_19325 (trmE)
Transfer RNA biogenesis [BR:
zdf03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
AN401_19325 (trmE)
Prokaryotic type
Methyltransferases
AN401_19325 (trmE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
ABC_tran
AIG1
Ras
MMR_HSR1_Xtn
Arf
SRPRB
AAA_28
Roc
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ATG75734
UniProt:
A0A291HUB3
LinkDB
All DBs
Position
complement(4167732..4169093)
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AA seq
453 aa
AA seq
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MSNETIVAQATAPGRGGVGIIRVSGPRAEAVAQAVLGKVPRVRHADYLPFQDEQGQVLDQ
GIALLFKGPHSFTGEDVLELQGHGGPVVLDMLVRRILALPGLRPARAGEFSERAFLNDKL
DLAQAEAIADLIEASSEQAARSALQSLQGEFSAHVHGLVEALTNLRIYVEAAIDFPDEEV
DFLSDGKIAGELYGIMDRLAEVQRQARQGAIMREGMKVVIAGRPNAGKSSLLNALAGKES
AIVTDIAGTTRDVLREYIHIDGMPLHVIDTAGLREATDAVERIGIERAWSEIEQADRILF
MVDGTTTRALHPREIWPDFVDRLPAHIGLTVVRNKADLSGEALTVVSDGEHPVYPISAKT
GLGIDALKEHLKACMGYQSGTEGGFSARRRHLDALHHADQHLIMAKEQLEVYMAGELVAE
ELRLAQEQLSQITGEFSSDDLLGRIFSSFCIGK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacgaaaccatcgtcgcccaggccaccgcccccggacgcggcggcgtaggaatc
atccgggtttccggcccccgggccgaagccgtggcccaggctgtgctcggcaaggtgccc
agggtgcgccatgccgactacctgccgttccaggacgagcagggccaggtactggaccag
ggcatcgccctgctgttcaagggcccccacagcttcaccggcgaagacgtgctcgagctg
cagggccacggcggccccgtggtgctggacatgctggtacgccgcatcctggccctgccc
ggcctgcgtccggcccgggccggcgagttcagcgaacgcgccttcctcaacgacaagctg
gacctggcccaggccgaggccatcgccgacctgatcgaagcctccagcgagcaggctgcc
cgctcggcgctgcagtcgctgcagggcgagttctccgcccatgtccacggcctggtggaa
gcgcttaccaacctgcgcatctatgtggaagcggccatcgactttcccgacgaggaggtg
gacttcctctccgatggcaagatcgccggcgagctgtacggcatcatggaccggctggcc
gaggtgcagcgccaggcccgccagggcgccatcatgcgcgaaggcatgaaggtggtgatc
gccggccggcccaacgccggcaagtccagcctgctcaacgccctggccggcaaggagtcg
gccatcgtcaccgacatcgccggcaccacccgcgacgtgctgcgggaatacatccatatc
gacggcatgccgctgcacgtcatcgacaccgccggcctgcgcgaggccaccgacgcggtg
gagcgcatcggcatcgagcgggcctggagcgaaatcgaacaggccgaccgcatcctgttc
atggtggacggaaccaccacccgcgccctgcacccacgcgagatctggcccgacttcgtc
gaccgcctgcccgcccacatcggcctgacggtggtgcgcaacaaggcggatctgagcggc
gaggcgcttaccgtggtgagcgacggcgaacacccggtctaccccatttccgccaagacc
ggcctcggcatcgacgccctcaaggagcacctcaaggcctgcatgggctaccagagcggc
accgaaggcggcttcagcgcccgccgccgccacctggacgccctgcaccacgccgaccag
cacctgatcatggccaaggagcagctcgaggtgtacatggccggcgaactggtggcggaa
gaactgcgcctggcccaggagcagctcagccagatcaccggcgaattcagctccgacgac
ctgctgggacggattttctcgagcttttgtatcgggaagtga
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