Zeus faber (John dory): 307228263
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Entry
307228263 CDS
T12102
Symbol
LOC307228263
Name
(RefSeq) paired amphipathic helix protein Sin3a-like
KO
K11644
paired amphipathic helix protein Sin3a
Organism
zfa
Zeus faber (John dory)
Pathway
zfa04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
zfa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
307228263 (LOC307228263)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zfa03036
]
307228263 (LOC307228263)
Chromosome and associated proteins [BR:
zfa03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
307228263 (LOC307228263)
REST complex
307228263 (LOC307228263)
Heterochromatin formation proteins
Other heterochromatin formation proteins
307228263 (LOC307228263)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
307228263
NCBI-ProteinID:
XP_079854008
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All DBs
Position
3:25664371..25682168
Genome browser
AA seq
1292 aa
AA seq
DB search
MKRSLEDQEAVFSSQQQQSRRIPVPGAAENFQHRVLTPSSAAPEAAADKMQPSTGIQYSI
PQGYQVPTMPQSSGGHGHGHGHNNSSAPHIGPHTHNTAVQSQGPTVVQGHIHPPSTQGQQ
QFQRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHP
DLIMGFNTFLPPGYKIEVQTNDLVNVTTPGQIHYITPHGISVQNIPVSGAPSQPVVHHPH
QNLQQATPHTNTPPAVPPQLTPAKTSKQPIQSPALTPTSQPNPSIPSYASPRSPSAQSHT
PVSNVPTGGPALQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKE
AGGNYTPNLTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTADRAESVRNDH
GGTVKRPLLNNKQRLNQNGLPLRRPSAVGASPPVKKKPKMLGKDHAVAEASKHSTGTETL
FFEKVKKALQSSEAYDNFLRCLLIFNEEVISRAELVQLVIPFLGKFPELFTWFKNFLGYR
ESSHVESFPKERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTQLCKEVLNDTW
VSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRALEAVQRRLSRMSA
EEQLRFRLDNTMGGCSEVIHRKAVQRIYGDKAQDIIDGLKKNPAVCVPIVLKRLKMKEEE
WREAQRGFNKIWREQNEKYYLKSLDHQGVNFKQNDTKVFRSKTLLNEIEMLYDERQERAA
EDAMGPPPSGPHVTLPYDESQILEDAAALIIHHVKRQVGIQKDDKYKIKQIIHHFIPDML
FTRRGELSDVEEDDCDEEEEEAETDRDGDKKPNGLPSAGGGSSSTTKSKLLFSGTGAQKL
RAQDDAYNLFYANNNWYILLRLHQILCTRLLRIYGQAEKQIEEYAREREWEREVLDLKRE
KNENPAIQLRMREPMDVDVEDYYSAFLEMVRNLLDGNMEPAQYEDSLREMFTIHAYIAFT
MDKLIQSIVRQLQHIVSDELCVRVTDLYLRESGNKATGGTPSTQTSRATAEGGYQRKAEQ
LMSDENCFKLMFVKSRGSVSLAMELLDTEEENSDEPAEAERWSDYVGRYLNSNSASPELR
EHLAQKPVFLPRNLRRIWKCQRGWEQLQQERMSKSERPPGDGGGTLKMECMFKLNSYKMV
YVCKSEDYMYRHTALTRAHQSQQQVNTRLHRRFQTWLDKWAKEHVTGEMAADNRKWLMGE
RRDGLLPCTTTRNPEILHYLDVNKYRVKYAAP
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggagtttggaggaccaggaagccgtgttttcatcccagcagcagcagtcaagg
cgcatcccggttcccggtgctgcagagaacttccagcaccgtgtcctaaccccgtcctcc
gccgcgccggaggcagccgcagacaaaatgcaaccatccactggcatccagtattcaatc
ccacagggttaccaggtgcccaccatgccgcagagctcggggggacacgggcacgggcac
ggccacaacaacagctcggcgcctcacatcgggccccacacccacaacacagcggtgcag
tcccaggggcccacggtggtccaaggtcacatccacccgccctccacccaagggcagcag
cagttccagcgactgaaggttgaggatgcattgtcctacctggaccaagtgaagctgcag
tttgggaaccagcctcaagtttataacgacttccttgacatcatgaaggagttcaagtcc
cagagcatcgacacccccggagtgatcagccgcgtttcccagctcttcaagggccaccca
gacctcattatgggcttcaacaccttcctgccgccgggctacaagatcgaggtgcagacc
aacgatttggttaacgtgaccacgccgggacagatccactacatcaccccccacggcatc
tccgtccagaacatcccagtgagcggtgcgcctagccagccggtcgtccaccacccgcac
cagaatctgcagcaggccaccccgcacaccaacacccccccagcggtaccgccccagctc
acaccagccaaaaccagcaagcagccgatccagtccccagccctgaccccaaccagccag
cccaacccatctatcccatcatacgcctccccccgctccccctcagcccagtcccacact
ccggtcagcaacgtgcccaccggggggcctgcgctgcagaacaaccagcccgtggagttc
aaccacgccatcaactatgtcaacaagatcaagaaccgcttccagggccagccagacatc
tacaaggccttcctggagatcctccatacttaccagaaggagcagcggaacgctaaggag
gcggggggcaactacaccccaaacctgacggagcaggaggtctatgctcaggtggcacgg
ctcttcaagaaccaggaagacctgctctcggagtttggacaattcttgccagacgcaaac
agctcggtcctgctgagcaagaccacggcggaccgggccgagtcggtgcgaaacgaccac
ggcggcacggtgaagagacccctgctgaacaacaagcagcggctcaaccagaacggcctg
cccctcaggagaccctctgcagtgggcgcttcgccccctgtcaagaagaaacctaagatg
ttggggaaggaccacgccgtggctgaagccagcaagcacagcaccggcaccgaaactctg
ttctttgaaaaggtgaagaaggctctgcagagctccgaggcgtacgacaacttcctgcgc
tgtctgctgatcttcaacgaggaagtgatttcacgcgccgagctggtgcagctggtcatc
ccgtttctgggaaaattcccagagcttttcacatggttcaagaactttctgggctaccga
gagtccagccacgtggagagtttccccaaggagcgcgccaccgagggcatcgccatggaa
atcgactacgcttcctgtaagagactgggctctagctaccgagccctgccaaagagttac
cagcagccgaagtgcaccgggcgaacacagctctgcaaagaggttttgaacgacacgtgg
gtgtccttcccgtcctggtcagaggattccacattcgtcagctccaagaagactcagtat
gaagagcacatttatagatgtgaggacgagcgctttgagctggacgtcgtcttggaaacc
aaccttgccacgatacgggcactggaggccgtgcagcggaggctgtcgcgcatgtctgcg
gaggagcagctgcgcttccggctggacaacacgatgggcggctgctccgaggtaatccac
cgcaaggctgtccagaggatatatggcgacaaggcccaggacatcatcgacgggctcaag
aagaaccccgccgtctgcgtccccatcgtcctcaagagattaaagatgaaggaggaggag
tggagagaagcccagagaggtttcaacaagatctggagggagcagaacgagaaatattac
ctaaagtctctggaccaccagggtgtcaacttcaagcagaacgacacgaaagtgtttcgc
tcaaaaacgttgcttaatgaaattgagatgctgtatgatgagcgccaggagcgtgcggca
gaagacgccatggggcccccgcccagcggcccgcacgtgaccctgccatacgacgagagc
cagatcctggaggacgccgccgccctgatcatccaccacgtcaagcggcaggtgggcatc
cagaaggacgacaagtacaagatcaagcagatcatccaccacttcatccccgacatgctg
ttcacgcggcgaggggagctgtccgacgtggaggaagacgactgcgatgaggaggaagag
gaggccgagactgaccgagacggagacaagaagcccaacgggctgccgagcgccggtggc
ggcagcagcagcaccaccaagtccaagctgctgttcagtggcacgggtgcccagaagctg
agggcccaggacgacgcctacaacctgttctacgccaacaacaactggtacatcctcctg
cgcctgcaccagatcctctgcacgcggctgctgaggatctacggccaggccgagaagcag
attgaggagtatgctcgcgagcgcgagtgggagagggaagtcctggacctgaaacgggag
aagaacgagaacccagcgatccagctgaggatgagagagcccatggacgtcgacgtggag
gactactactctgccttcctggaaatggtgcggaaccttctggacggcaacatggagccc
gctcagtacgaggattccctgagggaaatgttcaccatccacgcctacatcgccttcacc
atggacaagctgatccagagcatcgtgcggcagctccagcacattgtgagtgatgaactg
tgcgtgcgtgtgactgatttgtacctgcgggaaagcggcaacaaagccacagggggcacg
ccgtctacccagacctccagggccacggcagagggaggctaccagcgcaaggcagagcag
ctgatgtccgacgagaactgcttcaagctgatgtttgtgaagagcagaggaagtgtttct
ctggcgatggagctgctggacacagaagaggagaactcagatgagccggccgaggcagag
cggtggtcagactacgtgggccggtacctgaactcgaactcggcgtccccagagctgcgt
gagcacctggcccagaagcctgtgttcctgcccaggaacctgaggaggatctggaagtgc
cagaggggctgggagcagctgcagcaggagaggatgagcaagtcagagcggccgccgggc
gacggtggcggcacgctcaagatggaatgcatgttcaagctcaactcctacaagatggtg
tacgtctgcaagtcggaggactacatgtaccgccacacggcgctcacgcgggctcaccag
tctcagcagcaggtgaacactcgcctgcaccggcggtttcagacctggttggacaagtgg
gccaaggagcacgtgacgggggaaatggccgccgataaccgcaagtggctgatgggagaa
cgcagagacggtctgctgccctgcaccaccacgcgcaaccccgagatcctccattacctc
gacgtcaacaagtaccgggtgaagtatgcggcgccgtaa
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