Zeus faber (John dory): 307229875
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Entry
307229875 CDS
T12102
Symbol
ddx19b
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
zfa Zeus faber (John dory)
Pathway
zfa03013
Nucleocytoplasmic transport
zfa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zfa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
307229875 (ddx19b)
03015 mRNA surveillance pathway
307229875 (ddx19b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zfa03019
]
307229875 (ddx19b)
Enzymes [BR:
zfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
307229875 (ddx19b)
Messenger RNA biogenesis [BR:
zfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
307229875 (ddx19b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF1028
Motif
Other DBs
NCBI-GeneID:
307229875
NCBI-ProteinID:
XP_079856110
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All DBs
Position
5:complement(29991256..29999201)
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AA seq
483 aa
AA seq
DB search
MATDSWALAVDEQEAAAESIGNLEIKDKPAENGTPPTTAAAKDVTEVNNKTAEEDDKDDK
AAQSLLNKLIRSNLVNTTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPS
KIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNGKYPQCLCVSPTYELAL
QTGKVIEQMGKHYPDVKLVYAIRGNKLQRGMQLQEQIVIGTPGTMLDWCIKFKFIDPKKI
KVFVLDEADVMIATQGHQDQSIRIQRTLPKNCQMLFFSATFEESVWKFAQRIVPDPNIIK
LKREEETLDTIKQYYVLCNSKEEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAGELSRE
GHQVALLSGEMQVEQRAAVIERFRDGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDG
NPDNETYLHRIGRTGRFGKRGLAINMVDSKFSMNILQRIQDHFNKKIEKLDTDDLDEIEK
ISS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagattcctgggctctggctgtggacgagcaagaagcagcggccgaatcgatt
ggaaacctggaaattaaggataaaccggcggaaaatggcactcctccaaccactgcagct
gcaaaggatgtgacagaagtcaacaacaagactgcagaagaagatgataaagacgacaaa
gcagctcagtcactactgaataagttgatccgcagtaatcttgtcaacaccaccaaccaa
gtggaagttcttcagcgggatcccaactctccactctattctgtaaagtcctttgaagaa
ctacgactcaaacctcagttgctccagggtgtgtacgccatgggcttcaatcgaccctca
aaaatccaagagacggccttgcccatgatgttggcagaacctccacagaatctcattgcc
cagtcgcagtcgggtacaggcaaaactgctgcctttgtcctggccatgctcagccacgta
gaccccaacggcaaatatccccagtgcctgtgtgtgtcgcccacctatgagctggcactt
cagactggcaaggtgatcgaacagatggggaaacactacccagacgttaagctggtctac
gccatcagaggcaacaagctgcagaggggcatgcagctgcaggagcaaatagtgatcggc
actcctggtaccatgctggactggtgcatcaagttcaagttcatagaccccaagaagatc
aaggtgtttgtgctggacgaggccgacgtgatgatcgccacgcagggtcaccaggaccag
agcatccgcatccagaggacgctgcccaagaactgccaaatgctgttcttctcggccacc
ttcgaggagtctgtgtggaagtttgcccaacgcatcgtccccgaccctaacatcatcaaa
ctgaagcgggaggaggagacattggacacaatcaaacagtactacgttctgtgtaacagc
aaggaggagaagttccaagcgctctgcaacatctacggagccatcaccatcgctcaggcc
atgatcttctgccacaccaggaaaaccgcaggctggctggcgggggagctgtccagagaa
ggccaccaggtagcgctgctgagcggggagatgcaggtggagcagcgggcagctgtgatc
gagcggttcagggatggaaaggagaaagtcctggtcaccacaaacgtctgcgctcgcggc
atcgacgtcgagcaagtttccgtggtgatcaactttgacctgccggtggacaaggatggg
aatccggacaacgagacgtacctgcacaggatcggtcgcaccggacggtttggcaagaga
gggctggccatcaacatggtggacagcaagttcagcatgaacatcctccagaggatccag
gaccattttaataaaaaaattgaaaaactagacacggatgatctggacgaaattgagaag
atttcgagctaa
DBGET
integrated database retrieval system
