Zeus faber (John dory): 307232517
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Entry
307232517 CDS
T12102
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
zfa Zeus faber (John dory)
Pathway
zfa03030
DNA replication
zfa03410
Base excision repair
zfa03420
Nucleotide excision repair
zfa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
307232517 (rfc5)
03410 Base excision repair
307232517 (rfc5)
03420 Nucleotide excision repair
307232517 (rfc5)
03430 Mismatch repair
307232517 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zfa03032
]
307232517 (rfc5)
03036 Chromosome and associated proteins [BR:
zfa03036
]
307232517 (rfc5)
03400 DNA repair and recombination proteins [BR:
zfa03400
]
307232517 (rfc5)
DNA replication proteins [BR:
zfa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
307232517 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
307232517 (rfc5)
Chromosome and associated proteins [BR:
zfa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
307232517 (rfc5)
DNA repair and recombination proteins [BR:
zfa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
307232517 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
307232517 (rfc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_11
AAA_22
AAA_lid_RFC1
AAA_14
AAA_24
RuvB_N
DEAD
AAA_16
ResIII
AAA_assoc_2
DUF815
PhoH
AAA_7
AAA_30
ATPase_2
AAA_5
nSTAND_NTPase5
AAA_19
TIP49
nSTAND3
AAA_2
DNAX_ATPase_lid
Thioredoxin_6
Glyco_hydro_57
DUF4119
Motif
Other DBs
NCBI-GeneID:
307232517
NCBI-ProteinID:
XP_079859678
LinkDB
All DBs
Position
7:complement(4545180..4554721)
Genome browser
AA seq
335 aa
AA seq
DB search
MASSSTAPVPARNLPWVEKYRPHKLDDLISHKDILTTIQRFISEDRLPHLLFYGPPGTGK
TSTILACARQLYKDKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSHDQMIPRL
EHVIQQESIDVTPDGMKAVVTLSSGDMRRSLNILQSTSMAYGKVTEDTVYTCTGHPLRAD
IANILDWSLNKDFTSAYKQILHLKTLKGLALHDILTEVHLLVHRVDFPPAIRMSLLIKLA
DIEHRLASGTNEKIQLGSMVAAFQAVRDLVVSEAP
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagcagcacggcgccggtgccggccaggaatttaccatgggttgaaaaatac
agaccacataaacttgacgacctgatctcccacaaggacattttaaccacaattcagagg
ttcatcagcgaggaccggcttccccacctcctgttttacggcccaccagggacagggaag
acctccaccatcctggcgtgtgcccggcagctttacaaggacaaagagttcaactccatg
gtgttggagctcaacgcctcggacgacagaggtatcgatgtggtacgaggccccatcctg
agttttgcaagcacccggaccatattcaagaaaggctttaagttggtgatactcgacgaa
gcagatgccatgacccaagatgcccagaatgcattgcggcgagtgattgaaaagttcacg
gagaacacacgtttctgcctcatctgcaactacctgtccaagatcatccccgcactgcag
tcccgttgcacccgcttccgcttcggcccgctgtcccacgaccagatgatcccccggctg
gagcatgttatccagcaggagagcatcgacgtaactccagatggaatgaaagctgtggtg
acgctgtcgtcaggagacatgagaaggtccctcaacatcctgcagagcaccagcatggcg
tatgggaaggtgacggaggacacagtgtacacctgcacgggccacccgctgcgcgccgac
atcgccaacatcctcgactggtccctcaacaaagacttcacctcggcctacaagcagatc
ctccacctgaagaccctgaagggcctggccctccacgacatcctcactgaggttcacctg
ctggtgcacagagtggattttccgcctgctattcggatgagtctgctcatcaaactggct
gatattgaacacagattggcctccggcaccaacgagaagatccagctcggttccatggtg
gctgcgttccaggcggtcagggacctggtggtcagcgaggctccctag
DBGET
integrated database retrieval system