Zeus faber (John dory): 307232711
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Entry
307232711 CDS
T12102
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
zfa
Zeus faber (John dory)
Pathway
zfa03030
DNA replication
zfa03410
Base excision repair
zfa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
307232711 (pole)
03410 Base excision repair
307232711 (pole)
03420 Nucleotide excision repair
307232711 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zfa03032
]
307232711 (pole)
03400 DNA repair and recombination proteins [BR:
zfa03400
]
307232711 (pole)
Enzymes [BR:
zfa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
307232711 (pole)
DNA replication proteins [BR:
zfa03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
307232711 (pole)
DNA repair and recombination proteins [BR:
zfa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
307232711 (pole)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
307232711
NCBI-ProteinID:
XP_079859967
LinkDB
All DBs
Position
7:<17460550..17480895
Genome browser
AA seq
2287 aa
AA seq
DB search
MVLQNSGRYRSDRGQGGADAENQQDDGSALKRLERSQFTDEMDARFGFERMKEPGEKTGW
LLNMHPTEILDDDKRLISAVDYYFIQEDGSRFKAALPFQPYFYVATKKNCEREVISFLSK
KFQGKVSKVEMVSKEDLDLPNHLVGLKRNYIKLSFNTVDDLIKVKREISPAVRKNREREQ
SNDAYTAMLSSALSGGNVTAADEDGMSKKISDQLDNIVDMREYDVPYHMRLSIDLKIHVA
HWYNVRYRGSAYPPEIIRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMID
GQGYLITNREIVSEDIEDFEFTPKPEYEGPFTVFNEADEAALIQRWFDHVQETRPNIFVT
YNGDFFDWPFVETRAAHHGLNMYREIGFQKDSQGEYKASQAIHMDSFRWVKRDSYLPVGS
HNLKAAAKAKLSYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIFAL
CTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQVFNKLTDDGHVLDSETYVG
GHVGLESGVFRSDIPCRFKMNPAAFDILLQRVERTMRHAIEEEEKIPLEQVTNFNEVCEE
IKQKLLSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAIVNEAICAACDFNKPGAT
CQRRMAWQWRGEIMPASRSEFHRIQQQLESEKFPPFFPNGPPRAFHSLNREEQAKHEKKR
LADYCKRAYKKVHMTRLEERVTTICQRENSFYVDTVRAFRDRRYDFKGLHKVWKKKLSAA
QDSGEASEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTGANI
ITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNEKKPKVTISYPGAMLNIMVK
EGFTNDQYQELIDPATLTYETRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNED
GTLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTNLEEVYASVAKVADYWLDVLYSKAA
NMPDAELFELISENRSMSRRLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVISR
KPEGSPVTERAIPLAIFQSEPSVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGSAIQ
KIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAHQTLED
RPTADIEDFGMPAKNLQPAVLISTKRKRASQGEESQVESQDMELTQSWREILGPPPPMGT
TRELRLVWLRYHKKKWELQLKQRKERKKRRRLIDGEAQPVGGGVIRDCPTTGLGSFLRKT
ARSILDMPWQIVQIAETSHPGLYKLWAVIGSDLHCMKLNIPRVFYVNQKVPKQEEGATYR
KVNRLLPRSNMAYYLYEYSVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALVQLG
CMCMVNKQAVRDLAGREADTFELENLEMRSLAQFSYLEPGSVRHIYLYHHSQGHKALFGL
FIPSQRKASIFVLDTVRSNQMPNLSSLYGAERTALLEKTTEDLLPPEKHNFDVRAENDSK
AIHRALQRILLNYKEERRGPTLIAVQSNWELRRLAVGMPVLEEFPVVPVHVVDEISYNVL
DWQRHGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRKHNH
LLWLSPTARPDLGGKEADDSRLVMESDDRASVEINMPGCYSTVCVELDLQSLAVNTILQS
QHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGASSLASYDETALCSNTFRILKSMVVGW
VREITQYHNVYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKVFLQLVAEFKRLGST
MVYGNFNRIILCTKKRRIDDAIGYVEYITNSIHSREIFHSLSISFSRCWEFLLWMDPANC
GGVKGKLPSTLLYGEDGAKKKKSRDEEGEDGSEEEEEEEEEDQNGEPDDVEELIESNWNI
MQYLPQTASCQKYFLMIVSAYIAAVYHSMKEELRRNAPGATPIKRRGGSQASQQAAVDMS
ALPGMISFSQEYVSSELTQNFFTITQKIQKKVTGTRSVTQPSEMFPVLPGSHLPLSNPAL
EFIKYVCQVLSLDVNITNQVNKLKRDLLRLVDVGEFSEEAQFCDPCNSYILPEVICHHCN
FCRDLDLCKDPSVAQDGSVLPQWFCSNCQAQYETEFIEIALVEALQKKLMSFTLQDLVCI
KCKGVKEANMPLYCNCAGSFDLTFSAKSFSEQVKVFQNIASHYKMNFLEETIEWLLVMSP
QISLSAH
NT seq
6864 nt
NT seq
+upstream
nt +downstream
nt
atggttctgcaaaacagtggacggtacagatcagaccgtggacaaggtggcgctgacgcg
gagaatcaacaggacgatggctccgcgctcaagaggctggaacgcagccagttcaccgac
gaaatggacgcccgcttcgggttcgagaggatgaaggagccaggggagaagacaggctgg
ctgctgaacatgcaccccactgagatcttggatgatgacaagcggctgatcagtgctgtg
gattattattttatccaggaagatggaagtcgatttaaggcagcactcccatttcagcca
tatttttacgtagccactaaaaagaactgtgagagagaagtcatctcattcttgtccaag
aagtttcaaggaaaggtgtcaaaagtggaaatggtctccaaggaggacttggacctgcca
aaccaccttgttggactgaagagaaattacatcaagctgtcattcaacaccgttgatgac
ctcatcaaggtcaagcgtgagatttctcccgctgtgcgaaagaacagagagagagagcag
tccaatgatgcctatactgcaatgttatccagcgccttgtcaggtggaaatgtgactgct
gccgacgaggacggaatgtcaaagaaaatatccgaccagttagacaacatagtagacatg
agagagtatgatgtcccctaccacatgcgcctctccattgacctaaagatccacgtggct
cactggtacaacgttcgatacaggggcagcgcatacccaccagagattatcaggagagat
gatctggtggagcgacctgacccggtcgttctggcatttgacattgaaacaactaaactt
ccgctgaaattcccagatgcagagaccgatcagattatgatgatctcttacatgattgac
gggcagggctacctcatcacaaacagggagattgtgtctgaggacattgaggatttcgaa
ttcactcctaagccagaatatgaaggaccgtttacggttttcaatgaggctgacgaggca
gccctaattcagaggtggtttgatcacgtccaagagaccaggccaaacatctttgtgaca
tacaacggagacttctttgattggccctttgtggagaccagagctgcgcaccatggattg
aatatgtaccgggagatcggcttccagaaggacagccagggagagtacaaggccagtcag
gccatccacatggactccttcaggtgggtaaaaagagacagctaccttccagttggaagc
cataatctgaaggcagcagccaaggccaagttgagttatgaccctgtcgagctggaccct
gaggagatgtgccgcatggccacagaagaaccgcagactttagccacctactctgtgtca
gatgctgtggccacatattacctctacatgaaatatgttcaccccttcatctttgccctg
tgcaccatcatccccatggagcctgatgaggtgctgcgtaagggatccgggacactctgt
gaggccttgctcatggtgcaggccttccacgccaacatcatcttccccaacaaacaggag
caggtcttcaacaagctgacagatgacggccacgtcttggactctgagacttatgtaggg
ggccacgtgggcctggagtcaggagtgtttcgcagtgacatcccctgccgcttcaaaatg
aacccggctgcctttgacatcctgcttcaaagagtggagagaacgatgcgtcatgccatt
gaggaggaggaaaagattcccctggagcaggtcacaaactttaatgaggtctgtgaggag
atcaagcagaaactgctgtcactgaaggaggttccgaataggatagaatgtcccctcatc
taccatctggacgttggcgctatgtacccaaacatcatcctcaccaaccgtctgcagccg
tctgccatcgtgaatgaggctatatgtgctgcgtgtgacttcaacaagcccggcgccacc
tgccagaggaggatggcctggcagtggagaggggaaataatgccggccagtcgcagtgag
ttccaccgtatccagcagcagcttgagtctgagaagttcccgccattcttcccaaacggt
ccaccccgcgccttccactctctgaaccgagaggagcaggccaagcatgagaagaaacgc
ttggccgactactgtaagagggcgtataagaaggtgcatatgaccaggctggaggagagg
gtcaccactatctgtcagagggagaactctttctacgtggacactgtgagagccttcagg
gatcgcagatatgactttaaggggttgcacaaggtatggaagaaaaaattgtcagcagct
caagacagcggagaagccagtgaggtgaagcgctgcaagaacatggaaatcctgtatgag
tctcttcagcttgcccacaagtgtatcctcaactctttctacggctatgtcatgaggaaa
ggggcccgctggtactccatggagatggctggcatagtgtgctatactggagccaacatt
atcactcaggccagagagctcattgaacagatagggaggcccctcgagttggacactgac
ggtatctggtgtgtcctccccaacaccttccccgagaactttgtagtcaagaccagcaac
gagaagaagcccaaggtgactatctcctaccccggcgccatgctcaacatcatggtgaag
gagggcttcaccaacgaccagtaccaggagctgatagaccccgccaccctcacctacgag
accagggcggagaacagcatcttctttgaggtggatggcccctacctggccatgatcctg
cctgcctctaaagaggaagggaagaagctgaagaagaggtacgctgtgttcaatgaggac
ggtacactggctgagctgaaggggtttgaggtgaagagaagaggcgagctccagctcatc
aagatcttccagtcctctgtgtttgaggctttcctcaagggcaccaatctggaggaagtg
tacgcctccgtcgccaaagtggctgattactggctggatgttctctatagcaaggctgcc
aatatgccggacgctgagctgtttgagctgatctcagagaaccgctccatgtccaggagg
ttggaggactatggagagcagaaatccacctccatcagcacggccaagagactggccgag
ttcctgggggaccagatggtgaaggatgctggcctgagctgtcgctacgtcatctcccgc
aagcccgagggctcccccgtcacagagagggccattcccctggccatatttcagtctgag
cccagtgtgaagaagcacttccttcgaaagtggctaaagatgccaagcctccatgacctg
gacatccgctctattctcgactggagctactacatagagaggttgggtagtgccattcag
aaaatcattaccatcccagcagccctgcaacaggtgaagaatccggtgccaagagtgcgg
caccccgactggctccacaagaaactgctggagaaaaatgacatctacaagcagaagaag
atcagtgagctgttcaccagcgagggcaagagacaggtcgcccatcagactcttgaggac
cgcccgactgcggacattgaggattttgggatgccggcaaagaacctgcagccggccgtc
ctgatcagcaccaagcggaagcgagcgtcccagggtgaagagagccaggtggagtcgcag
gacatggagctcacacagtcctggagagagattctgggaccgccacccccgatgggaacc
acacgggagttgcgcctggtgtggctgcgctaccacaagaagaagtgggagctgcagctg
aagcagagaaaggagcggaagaagaggaggcggttgatcgacggggaggcgcagcctgtg
ggaggtggagtgatcagagactgccccaccacgggcctgggaagcttcctccgcaagact
gcacgcagcatcctggatatgccctggcagatcgtacagatcgcggagacgagccaccct
ggtctgtacaagctgtgggctgtgatcggaagtgaccttcactgcatgaagctcaacatc
cctcgggtcttctacgtcaaccagaaagtccccaagcaggaggagggagccacgtacaga
aaggtgaaccgactgctgcctcgctccaacatggcgtactacctgtatgagtattctgtg
cccgaggacatgtatcaggagcacatcaatgaaatcaacgctgacctctccgctccagac
atcgagggggtctatgaaacacaggttcccctgctgttccgtgcgctggtgcagctgggc
tgcatgtgcatggtcaacaagcaggcagtgagggatctggccggcagggaagctgatacc
tttgagctggagaatctggaaatgaggtccctggcccagttcagttacctggaacctggg
agcgttcgccacatctacctgtaccaccacagccagggacacaaggctctgttcggcctc
ttcataccttcgcaacgcaaggccagcatcttcgtcctggacacggtgcgaagcaaccag
atgcccaacctgagcagcctgtacggggctgaacgcacagccctcctggagaagaccacc
gaggatctcctgcctccggagaaacacaactttgatgtccgagctgagaacgacagcaag
gcgattcaccgtgcactgcaacgcattctgctgaactacaaggaggaacgtcggggccca
accctgatcgcagtgcagtccaactgggagctgcggcggctcgctgtggggatgccggtg
ctggaggagttcccggtggttcccgtgcatgtggtggatgagatcagctacaacgtgctt
gactggcagcgtcacggcgcccgccgcatgatacgccactatcttaacctggacagctgc
ctgtcccaagcgttcgacatggccaggtattaccacctgccggtggggaacctccctcag
gatgtgtccatcttcggctcagacctgttcctggccagacacctccggaagcacaaccac
ttgctgtggctctcgcccactgccaggcccgacctggggggcaaggaggcggatgacagc
cgcctggtcatggaaagtgacgaccgggcttctgtggagataaacatgccggggtgctac
tctacagtgtgtgtggagcttgacctgcagagtttggcggtgaacaccatcctgcagtcg
cagcatgtaaacgacatggaaggtggagccagtctgggcgtgagcttcgacgtgatccag
caggcatctttggaggacatgatgtcagggaaccagggtgcgagctctctggccagctac
gacgagacggccttgtgctccaacaccttcaggatcctgaagagcatggtggtgggctgg
gtcagggagatcactcaatatcacaacgtgtacgcagacaaccaggtgatgcacttctac
cgctggctgcgctcgcccagctcgctgctccacgacccggcgctgcaccgcaccctgcac
aacatgatgaagaaagtcttcctgcagctggtggcggagttcaagcgtcttggctccaca
atggtgtacgggaacttcaacaggatcatcctgtgcaccaaaaaacgaaggatagatgac
gccatcggctatgtggaatacatcaccaacagcattcattccagggaaatcttccactcg
ttgtccatctccttctcccgctgctgggagttcctgctgtggatggacccggccaactgc
ggcggggtgaaaggcaaactgccctccaccctcctctacggagaggatggagccaagaag
aagaaaagccgagacgaggagggagaagacggcagtgaggaggaggaagaggaggaagaa
gaggaccaaaacggagagccggacgacgtggaggagctgattgagagcaactggaacatc
atgcagtatttgccccaaacagcctcttgccaaaaatacttcctcatgatcgtctctgcc
tacatcgcagctgtctaccacagcatgaaggaggagctgaggcgtaacgcccccggagcg
actcccatcaagcggcgtggaggcagccaagcgtcccagcaggctgccgtcgacatgagt
gccctgcctggtatgatctccttctcccaggagtacgtgtccagcgagctgacgcagaac
tttttcaccatcacacagaagatccagaagaaggtcaccgggaccaggagcgtgacgcag
ccgtcggaaatgttccccgtcctgcccgggtcccacctgccgctcagcaacccagcgctg
gagtttatcaaatacgtctgccaggtcctttcgctggatgtcaacataaccaaccaggtg
aacaagctgaagagggacctgctgcgtctggtggatgtgggagagttctcagaagaagct
cagttctgtgacccctgcaactcctacatcctgccagaggtcatctgccaccactgcaac
ttctgccgggacctggacctctgcaaggacccgtccgtggcccaggatggctccgtcttg
ccccagtggttctgctctaactgccaggcccagtatgagacagagtttatcgagatagcg
ctggtagaagccctgcagaagaaactgatgagcttcactctccaggacctggtgtgtatt
aagtgtaaaggagtgaaagaagcaaacatgccgctctactgcaactgtgccggaagcttt
gatctcactttttcagccaagagcttctccgagcaggtgaaagtgttccagaacattgcg
tctcactacaaaatgaactttctggaagagaccatcgaatggctgctggtgatgagccca
cagatcagcttgagcgctcactga
DBGET
integrated database retrieval system
