Zeus faber (John dory): 307232727
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Entry
307232727 CDS
T12102
Symbol
skic3
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
zfa Zeus faber (John dory)
Pathway
zfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
307232727 (skic3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zfa03019
]
307232727 (skic3)
Messenger RNA biogenesis [BR:
zfa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
307232727 (skic3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_11
TPR_16
TPR_14
TPR_17
TPR_12
TPR_8
TPR_CcmH_CycH
TPR_9
CFAP70_TPR_C
TTC22_N
CFAP70_mid_TPR
ANAPC3
CABIN1_N
ANAPC8
TPR_Psidin_N
ARM_TT21_C
DUF6584
TPR_30
COG4_N
Motif
Other DBs
NCBI-GeneID:
307232727
NCBI-ProteinID:
XP_079859989
LinkDB
All DBs
Position
7:complement(20698148..20724223)
Genome browser
AA seq
1575 aa
AA seq
DB search
MSCKEVKAALKGAREAIKNKEFKEALKHCKAVLKLEKGNYNAWVFIGLAAAELEQPDQAQ
TAYRKAVELEPEQLLAWQGLGNLYEKTDQWDFKMELPDVYHKLIELHASSDKTKCYEVIR
KLSDIYHSDKEHLKLAKVWLQLIKLKEEEDAVDQTELSQIWQKMSGFLSDCTDVVLPDNN
TGQDLITVFEEAMALTKPIPGEGHRKLSADYIKCLSKRPQEEAELKAACESMLSLYPTHS
FPLEALCLHHLKADVQSEEAGSCFSRLLELSPSNGLAQVGLGTKALLEGKYEDAIIQLAP
GLKKTASSVGWCSLAQAQLRLHRYTDSTASCAQGLAVCGSGDEEQKIKLLKMQLEAQVRS
GEASAAEQALETLRQIPHAEKEPTLTAFKGRAYLNRGQVKQALQVSSELLASHPGLDQGL
ALRGLGQAAQGQHPQAEQSFLEAAAQRPDCGEYYFLLGKLYWDMGEETRCDRSKAHTHLL
KAAKLDPHLGCVFRYLGHYYREVAKDQGRARGCYKKAFALDSSDAESGAASVDLSMEQGD
MDTALAVLQSVIEKATPGSAKWAWMRRGLYHLKVGQHPQAVADLQAALRADPEDWVCWEC
LGEAYLNRRSFTAALKAFGKAHQLQPSSVYSVYQTAAIKQTLGKFKEAASEYLQITARRD
YVPALKGLGECLLSLAKSLMEDYRDGGAIDLIQQAIQNLFRAVELRPDLSCLWKLLGDAC
TAVGNVSPNRARVLVPGLLAGSDPTTQSHVLTQAQMLKVGERCYGRALKLMPGAPSLWYD
LGINYQRQARLPSPAEGDQSSQSLLLEKSQQCVKKAVMMDSGNHSYWNALGVIAMSSGLE
NFSLAQHSFIKSVEVEPNNVIAWTNLGVLYFKKENIELSHKAFKIAQSLEPLYVNCWIGQ
ALIAETVGSYDTMDLFRHTTELSTHTEGVKGYAYWVCHTLLDKTNRDSELYRYNIVQMNA
VSAAQVALSKYTERIQSDTVAFIMLGFLNEHLQLKMQAVQAYQRAVELLRSVTSTEELAF
ALSGYGRALCTLGHCEEAVRVYSDTPLQDLHDLAGLALASCKAGLLPESTSAYERALAVA
SSEKQKAYILTALALLQHRHGNLDSAKTLLFKCSMFKEPIPESLLCLCVLGLVHGDATLA
GAALSELLKQGTAAGSTVEQRCLLTCTLMAMQGNYTAVQREATKAVHSNPGNPSLWALLS
RLVPQYCPRKAKGGAVAGHVACLSSMTQGKRALLYSGVNQLASGRHSGEDSQKNALKTLQ
RAVLLRPDDPAAWAGLMAACHTENTSCFLSGAAPRRQGLERTLMAVVSEKVCGMEVIERP
LAQALEAWVLQQAVAGLTLEGRLEEAEALCSQVLSVSPEHPAVVLSLRRVQCQRLLLAAA
RGTTPATLPDSALEQLSSAVMANPTNLGAWHWLAEVYRSQGLLVQAVVAYRRSLQLASQL
GLHSRQIACLLQLALLALGPCMAGLPGADWPALVLEATAEVMKLGPSPMALLFQALLHFA
TKMTARETRRLLERLAYASSQEHPVGVARAAAWYLLRHLHAKNDQELMDKLLEHAKMNGD
QRLQDFYLLLTSSSS
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcaaagaagtcaaagccgctctgaaaggtgccagagaggccattaaaaacaag
gaattcaaagaggctttaaaacactgcaaggctgttctgaaacttgagaagggcaactac
aatgcctgggttttcatcggtttggcggcagccgagctggagcagccggaccaggctcag
actgcctataggaaggctgtggagctggagccggagcagctgctggcatggcagggttta
ggtaatctctatgagaagacagaccagtgggatttcaaaatggaactccctgatgtctac
cacaagctcattgagcttcatgcaagctctgacaaaaccaaatgttatgaagtgatcaga
aagttgtcagatatttatcactctgacaaagagcatttaaagttggccaaggtttggttg
cagctcatcaagttgaaggaggaggaagatgctgtcgaccagactgagctgtcacagatc
tggcagaagatgagcggcttcctctccgactgtactgatgtagtcctgccagacaataac
acaggacaagacctgatcacagtttttgaagaggccatggccctcaccaagcccatacca
ggagaaggacacaggaagctctcagcagactacattaagtgtctttctaaacgtccgcaa
gaagaggccgaattgaaagcagcgtgtgagtccatgctgtccctctacccgactcacagc
ttccccttagaagccctgtgcttgcaccatctgaaagcagacgtccaaagtgaggaggcg
ggcagctgtttctcaagactcctggaactgtccccgagtaacggtttggcccaagtgggt
ctgggcaccaaagctctgctggagggcaaatatgaagatgccattatacaactggcacca
gggttgaagaaaacggcctccagcgtcggatggtgcagcctggctcaggcgcagctcaga
ctgcacagatacactgacagcacagcctcctgtgctcaaggtctggcggtatgtggctct
ggagacgaggaacagaaaatcaagctgctgaagatgcagctggaggcccaggtccggagt
ggggaggccagcgctgcagagcaggccctggagacgctccgacagatcccacatgctgaa
aaggagccgacactcacagccttcaaaggacgagcctacctaaacagaggacaggtcaaa
caagccctccaggtttcctcggagctgctggcgtctcaccctggcctggaccagggcttg
gcgctgagaggtctgggacaggcagcgcagggacagcacccacaggctgagcagagtttc
ctagaagcggcggcccagcgcccagactgtggggaatactacttcctgctggggaaactc
tactgggacatgggagaggagacgaggtgtgacaggagcaaggcccatacgcatttactg
aaggctgccaagctggatccccacctgggctgtgtgttccgctacctgggccactactac
cgggaggtggccaaggaccagggccgtgcacgaggctgctacaagaaggccttcgcgctg
gacagcagcgatgcagaatctggagccgcctccgtggacctcagcatggagcagggcgat
atggacactgccctggcagtccttcagtcagtgatagaaaaagccactccgggctcagcc
aagtgggcctggatgagacgcggcctctaccacctgaaggtcggacaacatccccaggcc
gtcgctgatcttcaggcagctctcagggcagaccctgaggactgggtgtgctgggaatgt
ttgggcgaggcctacctgaaccgacggagcttcacggctgccctgaaggccttcggtaag
gcccaccagctgcagccctcctcagtctacagcgtgtaccagactgcggctatcaagcag
accctgggaaaattcaaagaggccgcctccgagtacctacagatcactgccagaagggac
tacgtccccgctctgaaaggcctaggagagtgtctgctgtccctcgccaaaagtctgatg
gaagactacagagacggaggggccatagacctcattcaacaggccatacaaaacctgttc
agggcggtggagctgcgcccagacctgtcttgcttgtggaagttgctgggcgacgcctgc
acagcggtcggcaacgtgtctcccaacagagcccgggttctggtgccgggcctgctggcc
ggttcggaccccaccacccagagtcacgtcctcacacaggcccagatgctgaaagttggg
gagaggtgctacggccgtgctctgaagctgatgcctggcgcccccagcctctggtacgac
ttgggaatcaactaccagcgccaggccagactccccagtcctgcggagggagatcagagc
tcccaatccctgctcctggagaagtcccagcagtgtgtgaaaaaggctgtcatgatggac
agcgggaaccacagctactggaacgctctgggtgtgatcgctatgagcagcggtcttgag
aacttctccctggctcagcacagcttcataaagtcggtggaagttgagccgaacaatgtc
atcgcctggaccaaccttggtgtgctgtattttaagaaggaaaatatagagctttcacac
aaggccttcaagatcgcccagtctttggagccactttacgtcaactgctggatcggacag
gccttgatcgcagagaccgtgggaagctacgacaccatggatctgttccgacataccacg
gagctcagcacacacacggagggggtgaagggctacgcctactgggtgtgccacaccctg
ctggacaaaaccaacagagactctgagctgtaccgctacaacatcgttcagatgaacgct
gtgtctgccgctcaggtggcgctcagcaagtacacagagagaatccagtcggacaccgtt
gccttcatcatgctgggcttcctcaacgagcacctgcagctgaagatgcaggcggtgcag
gcgtaccaaagggctgttgagctccttcggtccgtgacctcgacagaagaacttgctttc
gctctgagcggctatggccgtgcattatgcactctaggtcattgcgaggaggccgtgcgc
gtctactctgacactccgctgcaggatctccatgacttggcggggctggccctggcctcc
tgcaaggctggactcctaccagagagcaccagtgcctatgaacgcgccctggccgtggcc
tccagcgagaagcagaaagcctacatcctgacagccctggccctgctgcagcaccgacac
ggcaacctggactcggccaagactctgctcttcaaatgttccatgtttaaggagcccatc
ccagagtccctgctgtgtctctgcgtgttgggtctggtgcacggtgacgctacgctcgct
ggcgccgccctgtcggagctgctgaagcagggcacggccgccgggagcactgtggagcag
cgctgcctgctcacctgcaccctgatggccatgcagggcaactacaccgccgtgcagcga
gaagccaccaaagctgtgcacagcaatccaggcaacccgtctctgtgggccttactgtct
aggctggttccacagtactgccccaggaaggcaaaaggtggagcagttgctggccatgtg
gcttgcctctccagtatgacacaaggaaagagggcgctgttgtacagcggcgtgaaccag
ctggccagtgggagacactctggagaagacagccagaagaacgcactgaagaccctgcag
agagccgtgctgctccgtcccgatgacccggctgcatgggcggggttaatggccgcctgt
cacacagagaacacttcctgtttcctctcgggcgccgcccctcgcagacaaggcttggaa
cggacgctgatggcggtcgtttccgagaaagtgtgcggcatggaggtgatagagcgcccc
ctagcgcaggctctggaagcctgggtgctgcagcaggcggtggcgggcctcacgctggaa
gggaggctggaggaggcagaggcgctgtgctcacaggtgctgagtgtctccccggagcac
ccagcggtggtgctgtcactcagacgggtgcagtgccagcgcctcctgctggccgctgcc
cgcggtactacacccgcaactcttccagactcggcactggagcagctcagcagcgccgtg
atggccaaccccaccaatctcggggcgtggcactggctggcggaggtgtaccgcagtcag
ggtctgctggtccaggcggtggtggcgtaccgtcggagcctgcagctcgcctcgcagctc
ggcctgcacagcaggcagattgcttgcctgctacagctagcgctgctggccctgggaccg
tgcatggccggactccctggtgctgactggccggccttggtgctggaagccaccgccgag
gtgatgaagctgggcccttccccgatggcgctcctgttccaggctctgcttcacttcgcc
accaagatgacggccagggagacccggcgtctgctggagcggctggcctacgcctcctcc
caggaacacccggtaggcgtggcgcgggccgccgcctggtacctcctcagacacctgcac
gccaagaacgaccaggagctcatggacaaacttctggaacacgccaaaatgaatggagac
caacggctgcaggacttttatttgctgctcacctcctcatcctcctga
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integrated database retrieval system
