Zeus faber (John dory): 307234991
Help
Entry
307234991 CDS
T12102
Symbol
arhgef12a
Name
(RefSeq) rho guanine nucleotide exchange factor 12
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
zfa Zeus faber (John dory)
Pathway
zfa04270
Vascular smooth muscle contraction
zfa04625
C-type lectin receptor signaling pathway
zfa04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
zfa00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
307234991 (arhgef12a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
307234991 (arhgef12a)
09153 Circulatory system
04270 Vascular smooth muscle contraction
307234991 (arhgef12a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zfa04131
]
307234991 (arhgef12a)
Membrane trafficking [BR:
zfa04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
307234991 (arhgef12a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
307234991
NCBI-ProteinID:
XP_079863044
LinkDB
All DBs
Position
9:complement(16009825..16048685)
Genome browser
AA seq
1450 aa
AA seq
DB search
MSDTQSSFTDRFPKKANRTSSILSKDHPPDKKPKSDKSPLPSNDFDPTEALVQKRGSSTE
LAEGKPESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIKV
NGTLVTHSNHVEVVELIKSGSYVALTVLGRPPGLAQIPLTEAESEMLGVSISSPNSPAAE
RPYSPLDRLSSTVPSWDDGSGIHNQRVDILQRMLSKEQQELQAMKEEYSRNPSPKLLKDI
QEAKKHIPQLQGQLFKVTGAAQDAVSAGDAEEGGTFETDHTPSSKGDNSTDRSWSSSPLQ
LPRGFGLGSPESLHQRDSSCPSPKSSLRDSINSCHSPETEDAVDLDSLSPTTVSSPSSSR
LVSQIIGAEDDYFDSDQEQTNGQCNSFQSIEQLKSRPAHLAAFLHHVISQFDPAPLLCYL
YADLYKQTNSKETRRVFMDLHTFFIDRGANLKVTVPDSISADLDRRRTELIPEEINRQHV
QTLQDSLLSDIQKNLEDFRQKRSMGLTLAEAELSRLYQERARDRVALERERSYAENIVAK
IEDVLLTTQTTEEEKCTTMQYVILTYMKHLGVRVKEPRNLESKRVRINFLPKIKKSIKTE
KDGEEKVKKPRFPSILGPQRRPSRVEAASVGKALEGRPRPQKQLSQPTLGVSEHSEAGRL
RGSQSSEGSELTYSPSQAASPSNPATYSPDAGRDADAGGTPMSGPSRLSDGIQPDPLDGL
PYPASHFDLYALDQLQEEDRESERVLDGTPKALRRLEGLGAADVQSEDDQGTDSELDLLN
WQQLVGKEVLAGLRPHEIKRQEVINELFCTERAHVRMLRVLDHVFYQKLSKEAILPPADI
KNIFTNLEEILQLHVSVLEQMAAVRKRNESSVIDQIGDDLLSWFGGGEEEKIKQAVGTFC
SNQPFALEIIKTKQKKDSRFISFIQEAESNRLCRRLQLKDIIPVEMQRLTKYPLLLDNIV
KYTDNAAEKDKVKQASDCCRKILNHVNQAVKESEDKQRLEDYQRRLDLSSLKQTDNPMIL
ELKNLDLTKRTMVHEGPLSWKVNKDKTIELYTLLLEDILVLLQKQDERLILKCHSKNLTG
TADTKQIFSPIIKLSTVLVRSVATDHKSFFVLSMSDNGPQIYELMAPTVSDQRTWQRLIT
QRADAMKVKPHSVIPLPQTDGERDGVEMTAGVSRLSKDPDRTSTGSTQSDKESGTTSRNA
TQSSLPGSNPFEGLKAEEGEEEEEEEEEEEEEGFVDPELSYRAAEDGGDGDSFNLFPSKA
DEALKTLAALKQVLVTQLMSQEASERAQRSSGARLLRTTSLRTPVDSRARVMVHNGSERT
RAQNEDPGQDLGSGDTGFFDSPEDYAGYLVLEGYGGQGESSTDDDIMAATTGKQLSTSRG
CAADSGINLRFSSTSQAGSLSSFSRQVLSHLRNLQANLSYLKEVEAKYNNLIRQRSERSA
PDTDGNKDKR
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacacagtccagcttcactgacaggtttcccaagaaagcaaacagaaccagc
agcattctcagtaaagaccaccccccggacaagaaacccaaaagtgataaatctccactt
ccctccaatgattttgaccctacagaggctctggtgcagaagagaggcagcagcactgag
ctagcggaggggaagcctgagtcctgtggtctggtccagcgatgtgtgatcatccagaaa
gatgagaacggcttcggactcacggtcagcggcgacaaccctgtgttcgtgcagctcgtc
aaagaagatggggctgctatgcgagcaggtgtgcagacgggagacaggatcatcaaggtt
aatgggaccctagtaacgcattctaaccatgttgaagtggtggagctcatcaaatcgggc
tcctatgtggccctcacagtgctggggcggcccccggggctcgcccagatccctctcact
gaagccgagtccgagatgttgggagtcagcatttcctcccccaactccccggcagcagag
cgcccctacagccccctggaccgtctctcctccaccgtcccctcatgggacgacggtagc
ggtatccacaatcagagggtggacatcctgcagcggatgctctccaaggagcagcaggag
ctgcaggccatgaaggaggagtacagcaggaacccctcccccaaactactgaaagacatt
caggaagccaagaaacacattcctcagctgcagggtcagctcttcaaggtcaccggggca
gcacaggatgcggtttcagcaggcgacgcagaggaaggcggcacgttcgagacggaccac
actccctcctcgaagggcgacaacagcacagatcggtcctggagcagctcccctctgcag
ctgcctcgtggctttggcctgggctctccagagagcctgcaccaacgcgactcctcctgt
cccagcccaaagagctcgctccgggacagcatcaactcctgccactccccagaaaccgag
gatgctgttgacctggactctctgtcccccaccacagtgagcagcccctcgtcctctcga
ctcgtttcacagatcatcggagccgaggacgactactttgactcagaccaggagcagact
aacggccagtgcaacagcttccaaagcatcgagcagctcaagtcccgccccgcccatctc
gcagccttcctgcaccacgtgatctctcagtttgaccctgcgccactgctgtgctacctc
tacgctgatctgtacaagcagaccaactccaaagagaccaggcgggtcttcatggacctc
cacacctttttcattgaccggggagcaaatttaaaagttacagttccagactctatctct
gctgatcttgaccggcggcggacagagctgataccagaggaaataaaccgacagcatgtt
cagacactacaggactccttgctctcagacatccagaaaaatctggaggattttcggcaa
aagcgcagcatgggcctcactctggccgaagccgagctgtcgcgattgtaccaggagcga
gccagggaccgggtcgccctggagagggagcgctcctacgccgagaacatcgtcgccaag
atcgaggacgtcctgttgacgacgcagaccacggaggaagagaaatgcactacaatgcag
tacgtcatcctgacgtacatgaagcaccttggagtcagggtcaaagagccgcgcaacctg
gagtccaaacgagtacgaatcaacttcctccccaagatcaagaaaagcatcaagaccgaa
aaggacggcgaggagaaggtgaagaagcccaggttccccagcatcctcggaccgcagcgc
cgtcccagccgcgtcgaagcagcatcggtaggcaaggccctggaagggcgcccccggccc
cagaagcagctgtctcagcccacgctgggggtcagcgagcactcggaggccggccgcctg
agaggcagccagtccagcgagggctcggaactcacgtactccccgtctcaggccgcctcg
ccctccaaccccgccacctacagccccgacgccggcagagacgcggacgccggtgggact
ccgatgtcgggcccctccaggctgagtgacggaatacagccagaccccctggacggcctg
ccataccccgcctcgcactttgacctctacgcactggaccaactgcaggaggaagacagg
gagagtgaaagagtccttgatggaacaccaaaggccttaagaaggctggaggggctgggc
gctgcagatgttcagagcgaggacgaccagggaacagactcggagcttgacctcttaaac
tggcagcagctggtggggaaggaggtcctcgctggtctccggcctcacgagattaaaagg
caggaggtcatcaacgagctcttttgcacggagcgcgcccacgtgcggatgctgagggtc
ctggatcacgtcttctaccagaagctctccaaggaggccatactgcctcccgccgacatc
aagaacatcttcacgaacctggaggagattctgcagctgcatgtttcagtattggagcaa
atggcagccgtccggaagaggaacgagtcttcagtaattgatcagataggagatgacttg
ctctcgtggttcggcggcggcgaggaagagaagatcaaacaggccgtggggacgttctgc
agcaaccagccttttgccctggagatcatcaaaaccaagcagaagaaggattcccgcttc
atctccttcatccaggaagcggagagcaacagactttgtcgcaggttgcagttgaaggac
atcatccccgtggagatgcagcggctcaccaagtaccccctgttactagacaacattgtc
aagtacacagacaacgcggcggagaaagacaaggtgaagcaggccagcgactgctgccga
aagatcctgaaccacgtcaatcaggcggtgaaggagtcggaggacaagcagaggttggag
gactaccagcgacggttggacctctcctctctgaagcagaccgacaaccccatgatcctg
gagctcaagaacctcgacctcaccaagagaacgatggtgcacgaggggccgctgtcctgg
aaagtcaacaaggacaaaactatcgagttgtacacgctcctcctggaagacatcctggtc
ctgctgcagaagcaggacgagcgcctgatcctcaagtgccacagcaagaacctgacgggc
accgccgacaccaagcagatcttcagccccatcatcaagctcagcacggtgctggttcgc
tccgtggccacagatcacaagtcgttcttcgtgctctccatgtcagacaacggaccccag
atctatgagctcatggcgcccacggtctcggatcagagaacgtggcagcgtctcatcacg
cagcgggccgacgccatgaaggtcaaaccgcacagcgtcataccgctgcctcagacagac
ggagagagagacggcgtggagatgacggcgggcgtttccaggctgagcaaagacccggat
cgcacgtccaccggaagcacgcagtcagataaagagagcggcacgacttctcgaaatgcg
acgcagagctccctgcccggcagcaatcccttcgaaggcttgaaggcggaggagggggag
gaggaggaggaggaggaggaagaggaggaggaggaaggttttgtggacccggagctgtcg
taccgggcggcggaagacggcggcgacggcgactccttcaacctcttcccttccaaagcg
gacgaggcgttaaagacactggccgccttgaagcaggtgctggtcactcagctcatgtct
caggaggccagcgaacgggcccagcggtcctcgggtgcccgcctcctgaggaccacctcg
ctgcggacgccggtggacagccgcgcccgggtcatggtccacaacgggtcggagaggacg
cgggctcagaacgaggacccgggccaggacctcggctccggggacacgggtttcttcgac
tccccggaggactatgcagggtacctggtcctggagggctacggcggccagggggagagc
agcacggacgacgacatcatggcggcgaccacggggaagcagctgagcacgtcgcgtggc
tgcgccgccgactccggcatcaacctgcggttctcctccacgtctcaggccggaagcctc
tcgtccttcagccgacaggtgctctcgcatctacgcaacctgcaggccaacctcagctac
ctgaaggaggttgaagccaaatataataatttaatacgccaaaggtcagagaggtcggca
ccggacacggacggaaacaaagataagagatag
DBGET
integrated database retrieval system
