Zeus faber (John dory): 307235658
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Entry
307235658 CDS
T12102
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform 1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
zfa
Zeus faber (John dory)
Pathway
zfa04120
Ubiquitin mediated proteolysis
zfa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
307235658 (syvn1)
04120 Ubiquitin mediated proteolysis
307235658 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zfa04121
]
307235658 (syvn1)
Enzymes [BR:
zfa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
307235658 (syvn1)
Ubiquitin system [BR:
zfa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
307235658 (syvn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf-ANAPC11
zf_RING_Vps8_fungal
zf-RING-like
zf-RING_Vps41
FAR1_N
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
307235658
NCBI-ProteinID:
XP_079863939
LinkDB
All DBs
Position
10:complement(4320674..4342579)
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AA seq
653 aa
AA seq
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MVRAALVTATSLVLTGAVVAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHFRVLSLMLLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LLTMVLTTLIKYLLHTIDLQSENPWDNKAVFMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPGDLLASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNANQTPATPQAAPAAPAAQANVP
AAPPANVAPGMLPGFPPGMFPFWGPFPGVAPPGAPPANAGAAEAPQGNTEATQGAGTSWP
PSTATEPPTGASPPGPGNPAFPFPFAPPPFTSTPWLPPPPPLPFVSSMPPPPPSLSGLSE
EELSELEAEGRRGLEARLQCLHNIHTLLDAAMLNIHQYLSTVATLAPPRNEATGGQSAGM
TSSETSHPGATGAESSPQEKGDDSSQLASGGAGFSRPADSTTAPGPEMATADGRGREEDD
DDDDDCNYEEQEQEEGGVEPSAAELRRRRLRKLETSPPSPSSSSSMAQPPPDN
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtgcggccttggtgactgccaccagtctggtgttgactggggcggtggtggcc
catgcctacttcctgaagcaccagttctacccgacagtggtttaccttacgaagagcagt
ccaagtatggcggttttgtacattcaagcctttgtgcttgtatttttgctgggaaagttc
atgagaaaggtgttctttgggcagctgagagctgcagagatggagcacctcattgagcgc
tcctggtacgcagtgactgagacgtgcctggccttcaccgtcttcagggacgatttctct
ccccgctttgttgcactgttcaccctgctgctcttcctcaagtgcttccactggctggct
gaggaccgggtggactttatggaaagaagtccaaacatatcctgggtgtttcacttccgg
gtgctatctctcatgctgctgctgggagtgttggacttcctatttgtcaaccatgcctgt
cacagcatcatcacccggggagcctcggtccagctggtctttggatttgagtatgccatc
ctgctgaccatggtgctgaccaccttaatcaagtacctgctccacaccattgacctgcag
agtgagaacccatgggataataaggctgtcttcatgctctatacagaactcttcaccggt
tttatcaaagtcctgctgtacatggccttcatgacaattatgattaaggtccacaccttc
cccttgttcgccattcgccccatgtatctggccatgaggcagttcaagaaagctgtaaca
gatgccataatgtccagaagagccatccgcaacatgaacactctataccctgatgctact
cctggagacctgctggcctctgacaatgtctgcatcatctgccgtgaggaaatggtcact
ggagccaagaaactgccttgcaatcacattttccactccagctgcctgcgatcctggttc
cagaggcagcagacatgtcccacgtgtcggatggacgtcctccgagcatccaacgccaac
cagactcctgccacgccacaggccgcgcctgctgcccccgcagcccaggccaacgtccct
gccgccccccctgccaatgtagccccgggcatgttaccagggttcccacccggcatgttc
cccttctgggggcccttccctggggtggcccctccgggtgcaccacctgcaaatgccggc
gcggcagaagctccgcaggggaacacggaggccacgcagggagcgggcacaagttggccc
ccttccactgctacagagccccccacaggagcttcccctcctgggccaggaaacccagcc
ttcccttttcccttcgctccacctcccttcacctcaacgccatggctgcctccgcctcca
cccctgcccttcgtgtcgtccatgcctccgcctccgccctccctgtcggggctgtcggag
gaggagctgagcgagctggaggcggagggccgccggggcctggaagcgcgcctccagtgt
cttcacaacatccacacgctgctggacgccgccatgctcaacatccaccagtacctcagc
accgtggccacactggccccccctcgcaacgaggccaccggcggtcagagcgctgggatg
acctcctccgaaacctcccacccaggtgccacgggagccgaaagctccccccaggagaag
ggggacgacagctctcagttggcgagcggcggtgcggggttctcccgaccggccgactct
accacggcccccggcccggagatggccaccgctgacggacgtgggcgggaggaagacgac
gacgacgacgacgactgtaactatgaggagcaggagcaggaggaggggggggtggagccc
agcgccgcagagctgaggcggcgccgcctccgtaagctcgagacgtcgccgccgtcgcca
tcttcctcatcctcgatggcgcagccgccaccagataattaa
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