Zeus faber (John dory): 307237464
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Entry
307237464 CDS
T12102
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
zfa
Zeus faber (John dory)
Pathway
zfa03030
DNA replication
zfa03410
Base excision repair
zfa03420
Nucleotide excision repair
zfa03430
Mismatch repair
zfa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
307237464 (pold1)
03410 Base excision repair
307237464 (pold1)
03420 Nucleotide excision repair
307237464 (pold1)
03430 Mismatch repair
307237464 (pold1)
03440 Homologous recombination
307237464 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zfa03032
]
307237464 (pold1)
03400 DNA repair and recombination proteins [BR:
zfa03400
]
307237464 (pold1)
Enzymes [BR:
zfa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
307237464 (pold1)
DNA replication proteins [BR:
zfa03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
307237464 (pold1)
DNA repair and recombination proteins [BR:
zfa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
307237464 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
307237464 (pold1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_exo2
DNA_pol_B_2
divDNApol
Motif
Other DBs
NCBI-GeneID:
307237464
NCBI-ProteinID:
XP_079866306
LinkDB
All DBs
Position
11:complement(19938972..19951700)
Genome browser
AA seq
1103 aa
AA seq
DB search
MDIKRRNGGPPMGQASQPKRGKTGGEWDDGPSTFEEELSMFDDVEVEGTEGQAGHDVIPV
GELFSADINPRWRRPHAPSLDPTSDTLVFQQIDLDYYLGGAVAGMPGQSHGNVPIIRMFG
VTDNGNSVCCHIHGFAPYFYTPAPTGFTREHLGEFKRELNSVVLKDMRSNKDNISVTVLA
VDITRKESMYGYHGSRVVDFLRITMAMPRLIAPAKRLLEQGFKFGHFPMHQYLPYEANID
FEIRFMVDSDVVGCCWMELPKGKFRLREERDPGDTDPRHPGKVSLCQYEVDVGWTDIISH
PAEGEWQRIAPLRVLSFDIECAGRKGIFPEADKDPVIQIASMVQRQGETEPFIRTVFTLQ
TCSSIIGSQILCFAEEKQLLQSWAEFVRTVDPDVVTGYNIQNFDFPYLLNRAVALKVDLF
PYLGRVRGIKSVLRESNFQSKQMGRRENKIMNMEGRVQFDLLQVLLRDYKLRSYTLNAVS
YHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMARV
TGVPLTYLLSRGQQIKVVSQLLRQAMKRDLVMPVVKTQPGEDYTGATVIEPEKGYYSVPI
TTLDFSSLYPSIMMAHNLCYTTLLQRGSAEQLGLSPEDFIKTPTSDQFVKSSVRKGLLPE
ILENLLSARKRAKAELKKETDPFKKQVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQ
SVTGFGRQMIEQTKQLVESRYTIAKGYSADAKVIYGDTDSVMVKLGVATVKDAMVLGREA
AEWVSSHFVPPIKLEFEKVYYPYLLINKKRYAGLYFSSNADTYDKMDCKGIETVRRDNCP
LVANLINTCLQNILINRDPEGAVAHTKEVISDLLCNRVDISQLVITKELTRTAQEYAAKQ
AHVELAERMKKRDAGSAPNLGDRVPYVIIKAAKGVAAYMKSEDPIYVLENNIPIDTQYYL
EQQLSKPLLRIFEPILGESKAENILLKGDHTRCKTVLTSRVGGLMAFAQKRSTCIGCKAV
LKTDAAVCDFCKKKESELYQKEIFHLRTLEERFARLWTQCQRCQGSLHEDVLCTSRDCPI
FYMRKKVQKDLDDQGKLMSRFGW
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggacataaaaagacgcaacggcggcccaccgatgggtcaggcgtcgcagcccaagcgc
ggcaaaaccggcggcgagtgggatgacggcccgtcgactttcgaggaggagctgtccatg
ttcgacgatgtagaggtggagggaacggagggccaagcggggcacgacgtcatccccgtc
ggtgagctgttctcggccgacatcaaccctcgctggcgccggcctcacgcgccttcgctg
gaccccacctcagacacactggtctttcagcagattgacctcgactactatttgggaggt
gcagtggcgggcatgccaggccagtcgcatggtaacgtcccaatcatccggatgtttggc
gtaacagacaatgggaacagcgtctgctgccacattcacggctttgcaccctacttctac
acccccgcaccgaccgggttcacacgcgaacacttgggtgaatttaaaagggagctgaac
tcggtggtgctgaaggacatgcgctccaataaggacaacatctctgtcaccgtgctcgct
gtcgacatcacccgcaaagagagcatgtacggttaccatgggagccgagttgtggatttc
ctccggattaccatggcgatgcctcggctcatagccccggcaaagagactgctggagcag
ggctttaagtttgggcattttcccatgcaccagtatctgccttatgaggcaaacatagat
tttgaaatcaggttcatggtggacagtgacgtggtcggctgctgctggatggagctcccc
aaaggaaagttcagactgagggaggagagggacccgggagacactgacccccgccacccc
ggcaaggtctccttgtgtcagtacgaggtggacgtgggatggacagatatcataagtcac
ccggcggaaggagagtggcagaggatcgcaccactccgggtcctcagcttcgacatagag
tgcgctggaagaaaaggtatcttccctgaggcggacaaagacccggtcatccagatcgcc
tccatggtgcagcggcagggagagacggagccgttcatccgcacagttttcacgctgcag
acctgctccagcatcataggatcccagatcctgtgcttcgctgaggagaaacaactactc
cagagctgggcggagtttgtgaggaccgtggacccggacgtagtcaccggctacaacatc
caaaactttgacttcccttacctcctcaacagggcggtggctctgaaggtggatctgttc
ccctacctgggcagagtgcgaggcatcaagtcggtccttcgagagtcgaacttccagagc
aagcagatgggccgcagagagaacaagatcatgaacatggagggcagagttcagtttgac
ctgctgcaggttctcctcagggactacaaattgcgctcgtacacgctcaacgccgtcagt
taccacttcctgcaagaacagaaagaggacgtgcaacattccatcatcactgacctgcag
aacggcaacgagcagacacggcggcgcctggccgtctactgcctgaaggacgcctacctg
ccgctacggctgctgcagaagctcatgtgcgtcatcaactacatggagatggccagggtg
acgggggtgccactcacctacctgctctccagggggcagcagatcaaggtggtgtcccag
ctgctgcgacaggccatgaaacgggacctggtcatgcctgttgtgaagacgcagccgggg
gaggactacaccggagcgacggtcatcgaaccagagaaagggtactacagcgtccccatc
accaccctggatttctcctccctgtatccctccatcatgatggcccacaacctctgctac
accacgctgcttcagagaggctcggcagagcaactgggactgtcgccggaggacttcatc
aagacgccgaccagcgaccagtttgtcaagagctccgtgcgaaagggacttctgcccgag
atcctggagaacctgctgtctgccaggaagagagcaaaggcggagctcaagaaggagacg
gacccattcaagaagcaggtgctggacggcagacagctcgcgctgaagatcagcgccaac
tctgtgtacggcttcactggagcccaagtggggaagctgccgtgcctggagatctcacag
agtgtgacgggctttgggcggcagatgatcgagcagaccaagcagctggtggagtctcgg
tacaccatcgccaagggctacagcgcggacgcaaaggtcatttacggagacacggattcg
gtcatggtcaagctcggcgtcgccacggtgaaggatgccatggtgctgggccgagaggca
gctgagtgggtgtcctcgcacttcgtcccccccatcaagctggagtttgaaaaggtgtac
tatccgtacttgctgatcaataagaagcgctacgccggcctctacttctcgtccaacgcc
gacacgtacgacaagatggactgcaaaggcatcgagaccgtccgcagagacaactgcccc
ctggtggcgaacctcatcaacacctgcctgcagaacatcctcatcaacagggatccggag
ggggcggtggcccacaccaaggaggtgatctcagacctgctgtgcaaccgcgtcgacatc
agccagctggtcatcaccaaggagctgacgcgcacggcccaggagtacgcggccaagcag
gcgcacgtggagctcgccgaaagaatgaagaagagggacgccggcagcgcccccaacctg
ggagacagagttccctacgtcatcatcaaagctgcgaagggtgtagcggcgtacatgaag
tcagaggaccccatctatgtgctggagaacaacatccccatcgacacgcagtactacctg
gagcagcagctctccaagcccctgcttagaatcttcgagcccattttgggagagagcaaa
gctgaaaacatcctcctcaagggagaccacacccgctgtaagaccgtgctgacctccagg
gtgggaggcctcatggcgttcgctcagaagagaagcacctgcatcggctgcaaggctgtg
ctcaagacagacgcggccgtgtgcgatttctgcaagaagaaggaatctgaattatatcaa
aaggagatcttccatctcagaacgttagaggagcgcttcgctcgcctctggactcagtgc
cagcgctgccaaggctctctgcacgaggacgtgctctgcaccagccgagactgtcccatc
ttctacatgaggaagaaagtccagaaggatctggacgaccagggcaagctgatgtctcgg
tttgggtggtga
DBGET
integrated database retrieval system
