Zeus faber (John dory): 307238362
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Entry
307238362 CDS
T12102
Symbol
tnr
Name
(RefSeq) tenascin-R
KO
K06252
tenascin
Organism
zfa Zeus faber (John dory)
Pathway
zfa04510
Focal adhesion
zfa04512
ECM-receptor interaction
zfa04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
zfa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
307238362 (tnr)
04518 Integrin signaling
307238362 (tnr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
307238362 (tnr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
zfa00536
]
307238362 (tnr)
Glycosaminoglycan binding proteins [BR:
zfa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
307238362 (tnr)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Pur_ac_phosph_N
Fn3_PBP1
EGF_Tenascin
EGF_2
Fn3_VIN3
FN3_Tor_3rd
Fn3_Dep-1_2nd
Interfer-bind
DUF4998
Fn3_ROS1
DUF7949
Motif
Other DBs
NCBI-GeneID:
307238362
NCBI-ProteinID:
XP_079867421
LinkDB
All DBs
Position
12:complement(<12922085..>13030763)
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AA seq
1420 aa
AA seq
DB search
MEGLEEEEEEETMEGQKNEKEGTRHKQQCDGGIQQQQNPLQRSSVKDVLKGILPGKDGQK
FAFNAEASAQGAPSADKKLVRTVRVRRQVGPGGLDPDPATSTALTNQTLREQPLVFNHVY
NINVPVESLCSVDLDSSAPPPPAAPGPRAELGSRPPMEGPPGPTEYTEQTVDADSQVTFT
HRISIPKAACGCPASSTVQQLASRIEMLEREVSLLRAQCGSGCCGENSAMGRLDFVPGCG
GHGSFSMELCGCVCEEGWTGRNCTDPRCPDDCSGQGVCMDGECACDRDFGGDNCSEPRCP
SDCSGRGLCIDGECVCEESFTGDDCTVGRCLNDCSDQGICANGTCRCRPGYVGDDCSLVY
CANNCSGKGVCKEGFCVCQDGFAGDDCNSVAPAMNLKVRGVTERTVELEWEGSVVLTDFL
ITYTPSSPGGIQLELRVPGNVTTCTVSDLQAGMEYNINVFAVINSSISVPTSIAVSTYLS
NPDGLLFKSITETSVEVQWQPFYYSFDGWEISFIPKDNDGGMTAQLPSTITSFLQTGLRP
GEEYTVNLVALRDQGRSQPVTATVTTLIDGPTQLVVRDVSDTVAFVEWRPPKAKIDQVVL
RYGLVGREGPRTTFRLQPTLSQYSLQVLRPGSRYEVSVSGIRKGNESGSISTEFTTEIDA
PKNLRLVSKTSTSLELEWDNSEAEVEGYQLVYSTLSGDLYDKVIVPRNEGATTKTTLTDL
LPGTEYGIGISAMKGANQSTPATMNARTGLDVPLDLTVTASTDNTITLVWGVVQGPIDHY
KVTYTSSSGATTEVTVPKDITTTTLTDLEPGTEYTITVAARRGRQQSTAATIDAYTGIRP
VTHLYLSEVTSDSVVVAWSAPAPPADLFILSYASADGSDTSKVTLEGSKTRSLVQGLLPS
TRYTISLITIQGDATSEPVTASLTTGMDPPKEMAVSFVTEDAMTISWIQPLAPFDYYKMS
YQSARGRVDSVVIDSEVTNYTLSGLFPATEYEVSLTAVKGSQESKVVSTSVFTAMDMPAE
LTALNITPQGALLRWNPPLSSVDNYVLTLTHSQVTADTFLVEGNKQEHQLSSLKPSTTYS
VALYATKGPLTSGTVIANFQTPMDAPVNLTASEVNHRSALIAWQPPLAEIDNYMLTYKSA
DGSRKELILDAEDTWIRLEGLGETTEYTVRLQAARGLDTSAVLSTTFTTGSRLFAMPQNC
AQHLLNGETLSGIYTIYISRDPSQGVQVYCDMATDQGGWIVFQRRQNGLTDFSRKWSDYR
VGFGNLEDEFWLGLDNIQKIAAQGRYELRIDMKDGQESVYANYDKFSIGDARNLYKLRIG
EYNGTAGDSLSYHQGRPFSTKDRDNDIAVTNCALSYKGAWWYKNCHRANLNGKYGESRHS
QGINWYHWKGHEFSIPFVEMKMRPFNYRSISGKKRRSTPV
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atggagggcttggaggaggaggaggaggaggagacgatggagggccagaagaatgagaag
gagggaactaggcacaagcaacaatgcgatggagggatccagcagcagcagaacccattg
cagcgatcatctgtgaaggacgtgctcaagggcatcctgcctggaaaggatggacagaag
tttgcattcaacgccgaagcttctgcccagggcgccccctccgctgacaaaaagctggtg
cgcacggtcagagtgaggcgtcaggtcggacccgggggcctggacccggaccccgccacc
tccaccgcccttaccaaccagaccctgagggagcagccactggtgttcaaccacgtctac
aacattaacgtccccgtggagtcgctgtgctccgtagatttagactcctccgccccgccg
ccgcccgccgccccaggtccccgggccgagctcgggtcccggccccccatggagggcccg
ccggggcccacagagtacacggagcagactgtggatgctgacagccaggtgaccttcaca
caccggatcagcatccccaaggcggcgtgcggctgcccggcctccagcaccgtgcagcag
ctggcctccaggatcgagatgctggagagggaggtgtcgctgctccgagcccagtgcggg
tcgggatgctgcggggagaactccgccatgggccgcctggactttgtccccggctgcggc
ggccacggcagcttcagcatggagctgtgcggctgcgtgtgcgaggagggctggacgggc
aggaactgcacggacccccgctgccccgacgactgctcgggccagggcgtctgcatggac
ggcgagtgcgcctgcgaccgcgacttcggcggcgacaactgctcggagccgcgctgcccg
tccgactgctcgggccgaggcctctgcatcgacggcgagtgcgtgtgcgaggagtccttc
accggcgacgactgcacggtcggccgctgcctcaacgactgctcggaccaggggatctgc
gccaacgggacgtgccgctgccgaccgggctacgtgggcgacgactgctcgctggtctac
tgcgccaacaactgcagcgggaagggcgtctgcaaggaagggttctgcgtctgccaggac
gggttcgccggcgacgactgcaactccgtggcccctgccatgaatctgaaggtgcgtggt
gtgaccgaacgtaccgtggagctggagtgggagggctcggtggtgctgactgacttcctg
atcacctacactcccagcagcccgggaggcatccagcttgagctgagggtcccggggaat
gtcaccacctgcacagtgtctgacctccaggccggcatggagtacaacatcaacgtcttc
gccgtgatcaacagcagcatcagcgtgcccaccagcatcgccgtctccacatatctgtcc
aatcccgacggtttactcttcaaatccatcacggagaccagcgtggaggtccagtggcag
cccttctactactccttcgacggctgggagatcagcttcatccccaaggacaatgatgga
gggatgaccgctcagctgcccagcaccatcacctccttcctgcaaacgggcctaagacca
ggggaggagtacacggtcaacctggtggcgctcagagaccagggccggagccagccggtc
accgccaccgtcacaaccctgatcgatggtcctacgcagctggtcgtgcgtgacgtgtcg
gacacggtggcgttcgtggagtggaggcccccgaaggcaaagatcgaccaggtggtgctg
cgctacggcctggtgggccgcgagggtccacggaccaccttccgcctgcagcccacgctc
agccagtactccctgcaagtcctgaggccgggctcccggtacgaggtctccgtgagcggc
atcaggaaaggcaacgagagcggatcaatctccactgagttcacaaccgagatcgacgcc
cccaagaacctgcggctggtgtccaagacctccacctccctggagctggagtgggacaac
agcgaggcggaggtggaaggataccagctggtgtacagcaccctatccggagacctgtac
gacaaagtcattgtacccaggaacgaaggcgccaccactaagaccaccctcacagacctc
ttgcccggcacggagtacggtatcggcatctctgcaatgaaaggtgccaaccagagtacg
ccggcgacgatgaatgccagaacaggccttgacgtgccgctggatctcaccgtgacggcc
tccacggacaacaccataacactggtgtggggcgtggtccagggcccgatcgaccactac
aaagtcacctacacctcctcctctggcgccaccacggaggtcacggtgccgaaggatatc
actaccaccaccctgacggatttggagccggggacggagtacaccatcaccgtggcggca
cggagaggaaggcagcagagcaccgccgccaccattgacgcctatacagggatcaggccg
gtgacccacctctacctgtcggaggtgacctcggactcggtggtggtggcatggagcgcc
ccggcgccgcccgccgacctcttcatcctcagctacgcctcggccgacggcagcgacacc
tccaaggtgacgctggagggctccaagacccggtcgctggtgcaggggctgctgccctcc
acccgctacaccatcagcctcatcaccatccagggggacgccacctcagagcccgtcaca
gcctcgctcaccacgggcatggaccctcctaaggagatggccgtgtcctttgtgacggaa
gacgccatgaccatctcctggatccaacctctggctcctttcgactactacaagatgtcc
taccagtcggccagaggccgggtggacagcgtggtgattgacagcgaggtgaccaactac
accctgtccggcctgtttcctgccaccgagtacgaggtcagcctcaccgccgtcaagggc
agccaggagagcaaagtggtcagcacctccgtcttcacagccatggacatgccggccgag
ttgacggcgctcaacatcactcctcagggagccctgctgaggtggaaccccccgctgtcc
agcgtggacaactatgtgctcaccctcacacacagccaggttacagctgatacgttcctg
gttgaaggcaacaagcaggagcaccagttgtccagcctgaagcccagcaccacctactcc
gttgccctctacgccactaaaggacccctcaccagcggcaccgtcatcgccaacttccaa
acacccatggatgctccagtgaacctcactgccagcgaggtgaaccaccgcagcgccctc
atcgcctggcagcccccgctggccgagatcgacaactacatgctcacctacaagtcggcc
gacggcagtcgaaaagaactgatcctggacgctgaggacacgtggatccgcctggagggt
ctgggcgagaccaccgagtacacggtgcggctgcaggcagccaggggcctggacaccagt
gccgttctctccaccaccttcaccacagggagccgtctgttcgccatgccccagaactgc
gcgcagcaccttctgaacggcgagacgctgagcggcatctacaccatctacatcagcagg
gaccccagccagggcgtgcaggtctactgcgacatggccaccgaccagggaggatggatt
gtgttccagcgtcgtcagaacggcctcacagacttctccaggaagtggagcgactacagg
gtcggttttggaaacctggaggatgaattctggctcggcctggacaacatccagaagatc
gccgcccagggtcgctacgagctcaggatcgacatgaaggacgggcaggagtcggtctac
gccaactacgacaagttctccatcggggacgccaggaacctctacaagctcaggatagga
gagtacaacggcaccgcgggtgattctctgagctaccaccagggacgccccttctccacc
aaggacagggacaacgacatcgccgtcaccaactgcgccctgtcctacaaaggagcctgg
tggtacaagaactgccaccgggccaacctcaacggcaaatacggagagtcccgacacagc
cagggcataaactggtaccactggaaaggccacgagttctccatccccttcgtggagatg
aagatgaggccattcaactaccgcagcatcagcggcaagaagaggaggtcgaccccggta
tag
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